RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ATP9BO43861 1147 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 FANCCQ00597 558 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 CCDC92Q53HC0 331 aaPredicted RBP8.41□□□□□ -1.06
TUBE1-207ENST00000604689 FKBP15Q5T1M5 1219 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 ZCCHC8Q6NZY4 707 aaKnown RBP8.41□□□□□ -1.06
TUBE1-207ENST00000604689 CTR9Q6PD62 1173 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 FLCNQ8NFG4 579 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 DENND4BO75064 1496 aaPredicted RBP8.41□□□□□ -1.06
TUBE1-207ENST00000604689 RASA1P20936 1047 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 CHADLQ6NUI6 762 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 GAS2L3Q86XJ1 694 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 CHCHD4Q8N4Q1 142 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 KLHL23Q8NBE8 558 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 GAPVD1Q14C86 1478 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 KIF16BQ96L93 1317 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 GIGYF1O75420 1035 aaPredicted RBP8.41□□□□□ -1.06
TUBE1-207ENST00000604689 TRIM74Q86UV6 250 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 TRIM73Q86UV7 250 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 PLPP6Q8IY26 295 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 RANBP17Q9H2T7 1088 aaKnown RBP8.41□□□□□ -1.06
TUBE1-207ENST00000604689 VWDEQ8N2E2 1590 aa8.41□□□□□ -1.06
TUBE1-207ENST00000604689 MYO5CQ9NQX4 1742 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.4□□□□□ -1.06
TUBE1-207ENST00000604689 NPHP1O15259 732 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 RIPK4P57078 832 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 AMPD3Q01432 767 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 CLEC4GQ6UXB4 293 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 DNAI2Q9GZS0 605 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 CUEDC1Q9NWM3 386 aaPredicted RBP8.4□□□□□ -1.06
TUBE1-207ENST00000604689 SFMBT1Q9UHJ3 866 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 KNSTRNQ9Y448 316 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 FGD6Q6ZV73 1430 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 CHST12Q9NRB3 414 aa8.4□□□□□ -1.06
TUBE1-207ENST00000604689 THRAP3Q9Y2W1 955 aaKnown RBP8.4□□□□□ -1.06
TUBE1-207ENST00000604689 MTUS2Q5JR59 1369 aa8.4□□□□□ -1.07
TUBE1-207ENST00000604689 GYS2P54840 703 aa8.4□□□□□ -1.07
TUBE1-207ENST00000604689 C4orf46Q504U0 113 aa8.4□□□□□ -1.07
TUBE1-207ENST00000604689 CCDC91Q7Z6B0 441 aa8.4□□□□□ -1.07
TUBE1-207ENST00000604689 INPP5FQ9Y2H2 1132 aa8.4□□□□□ -1.07
TUBE1-207ENST00000604689 BCAR3O75815 825 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 ZNF746Q6NUN9 644 aaPredicted RBP8.39□□□□□ -1.07
TUBE1-207ENST00000604689 CENPQQ7L2Z9 268 aaPredicted RBP8.39□□□□□ -1.07
TUBE1-207ENST00000604689 MYLK4Q86YV6 388 aaPredicted RBP8.39□□□□□ -1.07
TUBE1-207ENST00000604689 ZHX3Q9H4I2 956 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 GRPEL1Q9HAV7 217 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 MAGI3Q5TCQ9 1506 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 ST20-MTHFSA0A0A6YYL1 179 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 MCM4P33991 863 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 COPB2P35606 906 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 LRRC41Q15345 812 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 RWDD1Q9H446 243 aaPredicted RBP8.39□□□□□ -1.07
TUBE1-207ENST00000604689 ANTXR1Q9H6X2 564 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 MRGBPQ9NV56 204 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 ARHGEF5Q12774 1597 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 FMN1Q68DA7 1419 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 FSD2A1L4K1 749 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 RSBN1LQ6PCB5 846 aaPredicted RBP8.39□□□□□ -1.07
TUBE1-207ENST00000604689 ARMC9Q7Z3E5 817 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 ENOX1Q8TC92 643 aaKnown RBP8.39□□□□□ -1.07
TUBE1-207ENST00000604689 DUSP9Q99956 384 aaKnown RBP8.39□□□□□ -1.07
TUBE1-207ENST00000604689 TMEM165Q9HC07 324 aa8.39□□□□□ -1.07
TUBE1-207ENST00000604689 KDM6BO15054 1643 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 HFM1A2PYH4 1435 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 KIF27Q86VH2 1401 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP47Q96K76 1375 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L15C9J2P7 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L10C9JJH3 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L13C9JLJ4 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L12C9JPN9 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L11C9JVI0 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L21D6R901 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L18D6R9N7 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 CSPG5O95196 566 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 SKIP12755 728 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L24Q0WX57 530 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 ATRIPQ8WXE1 791 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 LAMC1P11047 1609 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 MAP3K13O43283 966 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 COQ9O75208 318 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 KCNA2P16389 499 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 ATICP31939 592 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 SLMAPQ14BN4 828 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 SLC4A8Q2Y0W8 1093 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 MAMSTRQ6ZN01 415 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 SAPCD2Q86UD0 394 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 VPS37AQ8NEZ2 397 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 MRFAP1L1Q96HT8 127 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 MPP4Q96JB8 637 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 SPC25Q9HBM1 224 aa8.38□□□□□ -1.07
TUBE1-207ENST00000604689 RIMS1Q86UR5 1692 aaKnown RBP8.38□□□□□ -1.07
TUBE1-207ENST00000604689 WAPLQ7Z5K2 1190 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 CLASRPQ8N2M8 674 aaKnown RBP8.37□□□□□ -1.07
TUBE1-207ENST00000604689 RASSF4Q9H2L5 321 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 VTI1BQ9UEU0 232 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms