RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 TAF5LO75529 589 aa14.12□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 ATP5JP18859 108 aa14.12□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 FOXO4P98177 505 aa14.12□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 VPS37CA5D8V6 355 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 F13A1P00488 732 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 MRC1P22897 1456 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 MED23Q9ULK4 1368 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 PCDH11XQ9BZA7 1347 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 PCDH11YQ9BZA8 1340 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 DNM1Q05193 864 aaKnown RBP14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 STK3Q13188 491 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 H7C1W4 665 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 BLOC1S2Q6QNY1 142 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 SLAIN2Q9P270 581 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 KAT6BQ8WYB5 2073 aa14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 LRRC24Q50LG9 513 aa14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 FERMT3Q86UX7 667 aa14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 SNRKQ9NRH2 765 aa14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 FAM173BQ6P4H8 233 aa14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 ATG9AQ7Z3C6 839 aa14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 CWC25Q9NXE8 425 aaPredicted RBP14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 AFDNP55196 1824 aaKnown RBP14.1□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 IL2RBP14784 551 aa14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 ZSCAN31Q96LW9 406 aaPredicted RBP14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 SH2B1Q9NRF2 756 aaPredicted RBP14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 PSMA5P28066 241 aa14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 EVA1CP58658 441 aa14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 RNF20Q5VTR2 975 aa14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 PUS3Q9BZE2 481 aaKnown RBP14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 RPS6KB1P23443 525 aa14.08□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 TOB2Q14106 344 aaPredicted RBP14.08□□□□□ -0.15
HMGN3-AS1-201ENST00000604516 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 GOLIM4O00461 696 aa14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 ZNF609O15014 1411 aa14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 LARP1BQ659C4 914 aaKnown RBP14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 HAUS7Q99871 368 aa14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 LRRC2Q9BYS8 371 aa14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 ARFGEF2Q9Y6D5 1785 aa14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 NAP1L5Q96NT1 182 aaPredicted RBP14.07□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 TSPY26PQ9H489 355 aa14.07□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 GLI3P10071 1580 aa14.07□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 A0A0G2JLW4 131 aa14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 CYP21A2P08686 494 aa14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 TMEM87AQ8NBN3 555 aa14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 SYAP1Q96A49 352 aaPredicted RBP14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 SOS2Q07890 1332 aaPredicted RBP14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 MCMDC2Q4G0Z9 681 aa14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 PDLIM2Q96JY6 352 aa14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 SYNE4Q8N205 404 aa14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 UBE2HP62256 183 aa14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 USPL1Q5W0Q7 1092 aa14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 ZSCAN30Q86W11 494 aa14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 MPNDQ8N594 471 aa14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 KBTBD3Q8NAB2 608 aa14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 JAK2O60674 1132 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 CCDC191Q8NCU4 936 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 NEK1Q96PY6 1258 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 PAG1Q9NWQ8 432 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 A0A1B0GUL7 405 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 EYA2O00167 538 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 PPFIA3O75145 1194 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 DNAJC10Q8IXB1 793 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 HMG20BQ9P0W2 317 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 ABCC6O95255 1503 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 GIMAP6Q6P9H5 292 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 Q6ZUG5 572 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 STOX1Q6ZVD7 989 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 TMOD3Q9NYL9 352 aa14.04□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 IL15P40933 162 aaPredicted RBP14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 TSGA10IPQ3SY00 556 aa14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 TFIP11Q9UBB9 837 aaKnown RBP14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 JCADQ9P266 1359 aa14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 KCPQ6ZWJ8 1503 aa14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 ANKRD1Q15327 319 aa14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 PIGBQ92521 554 aa14.03□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 HCLS1P14317 486 aaPredicted RBP14.02□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 DDX11Q96FC9 970 aa14.02□□□□□ -0.16
HMGN3-AS1-201ENST00000604516 PHF14O94880 888 aa14.02□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 IFIT1P09914 478 aaKnown RBP14.02□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 MSNP26038 577 aaKnown RBP14.02□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 TTC6Q86TZ1 520 aa14.02□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 BRF1Q92994 677 aa14.02□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.02□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 GPTP24298 496 aa14.01□□□□□ -0.17
HMGN3-AS1-201ENST00000604516 ADORA1P30542 326 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms