RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 NOP58Q9Y2X3 529 aaKnown RBP15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 UBN2Q6ZU65 1347 aa15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 FAM177BA6PVY3 158 aa15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 SMARCA5O60264 1052 aaPredicted RBP15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 POLD1P28340 1107 aa15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 SUSD4Q5VX71 490 aa15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 KIF1BPQ96EK5 621 aa15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 SRP68Q9UHB9 627 aaKnown RBP15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 SH3TC1Q8TE82 1336 aa15.65■□□□□ 0.1
HERPUD2-207ENST00000603731 SLC34A2O95436 690 aa15.64■□□□□ 0.09
HERPUD2-207ENST00000603731 SSFA2P28290 1259 aa15.64■□□□□ 0.09
HERPUD2-207ENST00000603731 APLP1P51693 650 aa15.64■□□□□ 0.09
HERPUD2-207ENST00000603731 QSER1Q2KHR3 1735 aa15.64■□□□□ 0.09
HERPUD2-207ENST00000603731 PA2G4Q9UQ80 394 aaKnown RBP15.64■□□□□ 0.09
HERPUD2-207ENST00000603731 LAMB2P55268 1798 aa15.63■□□□□ 0.09
HERPUD2-207ENST00000603731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.63■□□□□ 0.09
HERPUD2-207ENST00000603731 PDE8AO60658 829 aa15.63■□□□□ 0.09
HERPUD2-207ENST00000603731 BICDL1Q6ZP65 573 aa15.63■□□□□ 0.09
HERPUD2-207ENST00000603731 RHPN1Q8TCX5 695 aa15.63■□□□□ 0.09
HERPUD2-207ENST00000603731 SETDB2Q96T68 719 aa15.63■□□□□ 0.09
HERPUD2-207ENST00000603731 USP42Q9H9J4 1324 aaKnown RBP15.63■□□□□ 0.09
HERPUD2-207ENST00000603731 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 CCDC57Q2TAC2 916 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 TBC1D9BQ66K14 1250 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 TNS4Q8IZW8 715 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 SLC16A10Q8TF71 515 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 NYXQ9GZU5 481 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 SIL1Q9H173 461 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 COPRSQ9NQ92 184 aa15.62■□□□□ 0.09
HERPUD2-207ENST00000603731 TUBGCP6Q96RT7 1819 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 DDX60Q8IY21 1712 aaKnown RBP15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 KIF3CO14782 793 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 NTSR2O95665 410 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 CTSWP56202 376 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 AMIGO3Q86WK7 504 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 SYNE4Q8N205 404 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 IL1RAPL2Q9NP60 686 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
HERPUD2-207ENST00000603731 CSF1RP07333 972 aa15.6■□□□□ 0.09
HERPUD2-207ENST00000603731 PTPN12Q05209 780 aaKnown RBP15.6■□□□□ 0.09
HERPUD2-207ENST00000603731 IFIT5Q13325 482 aaKnown RBP15.6■□□□□ 0.09
HERPUD2-207ENST00000603731 FAM161AQ3B820 660 aa15.6■□□□□ 0.09
HERPUD2-207ENST00000603731 PLEKHM2Q8IWE5 1019 aa15.6■□□□□ 0.09
HERPUD2-207ENST00000603731 CLASRPQ8N2M8 674 aaKnown RBP15.6■□□□□ 0.09
HERPUD2-207ENST00000603731 KLHDC4Q8TBB5 520 aa15.6■□□□□ 0.09
HERPUD2-207ENST00000603731 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
HERPUD2-207ENST00000603731 NPHP1O15259 732 aa15.59■□□□□ 0.09
HERPUD2-207ENST00000603731 FLAD1Q8NFF5 587 aa15.59■□□□□ 0.09
HERPUD2-207ENST00000603731 CCDC85AQ96PX6 553 aaPredicted RBP15.59■□□□□ 0.09
HERPUD2-207ENST00000603731 WDR90Q96KV7 1748 aa15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 MSH5O43196 834 aa15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 HCLS1P14317 486 aaPredicted RBP15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 NBPF5PQ86XG9 351 aaPredicted RBP15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 NUTM1Q86Y26 1132 aa15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 TTLL11Q8NHH1 800 aa15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 TSHZ2Q9NRE2 1034 aa15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 PNPLA7Q6ZV29 1317 aa15.58■□□□□ 0.08
HERPUD2-207ENST00000603731 IFIT2P09913 472 aaKnown RBP15.57■□□□□ 0.08
HERPUD2-207ENST00000603731 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
HERPUD2-207ENST00000603731 OTUD7AQ8TE49 926 aaPredicted RBP15.57■□□□□ 0.08
HERPUD2-207ENST00000603731 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
HERPUD2-207ENST00000603731 EYA2O00167 538 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 SASH1O94885 1247 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 MX1P20591 662 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 ITGA6P23229 1130 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 IL15P40933 162 aaPredicted RBP15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 CCDC152Q4G0S7 254 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 BMP2KLQ5H9B9 411 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 GPATCH3Q96I76 525 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 ZNF594Q96JF6 807 aaPredicted RBP15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 BACH2Q9BYV9 841 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 GREM2Q9H772 168 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 CARMIL3Q8ND23 1372 aa15.56■□□□□ 0.08
HERPUD2-207ENST00000603731 CIAO1O76071 339 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 GYS1P13807 737 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 PDE1AP54750 535 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 NFIXQ14938 502 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 TTC22Q5TAA0 569 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 AACSQ86V21 672 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 PCNTO95613 3336 aa15.55■□□□□ 0.08
HERPUD2-207ENST00000603731 SPEF2Q9C093 1822 aa15.54■□□□□ 0.08
HERPUD2-207ENST00000603731 AOX1Q06278 1338 aa15.54■□□□□ 0.08
HERPUD2-207ENST00000603731 SLC10A5Q5PT55 438 aa15.54■□□□□ 0.08
HERPUD2-207ENST00000603731 AK9Q5TCS8 1911 aa15.54■□□□□ 0.08
HERPUD2-207ENST00000603731 TFCP2Q12800 502 aa15.53■□□□□ 0.08
HERPUD2-207ENST00000603731 C8orf34Q49A92 452 aa15.53■□□□□ 0.08
HERPUD2-207ENST00000603731 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
HERPUD2-207ENST00000603731 NLRP3Q96P20 1036 aa15.53■□□□□ 0.08
HERPUD2-207ENST00000603731 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
HERPUD2-207ENST00000603731 CEP126Q9P2H0 1117 aa15.53■□□□□ 0.08
HERPUD2-207ENST00000603731 STAP2Q9UGK3 403 aa15.53■□□□□ 0.08
HERPUD2-207ENST00000603731 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms