RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C3orf67Q6ZVT6 689 aa21.43■■□□□ 1.02
PPFIA3-207ENST00000602716 CCDC24Q8N4L8 307 aa21.43■■□□□ 1.02
PPFIA3-207ENST00000602716 CSF1RP07333 972 aa21.42■■□□□ 1.02
PPFIA3-207ENST00000602716 NFIXQ14938 502 aa21.42■■□□□ 1.02
PPFIA3-207ENST00000602716 COL23A1Q86Y22 540 aaPredicted RBP21.42■■□□□ 1.02
PPFIA3-207ENST00000602716 TTLL11Q8NHH1 800 aa21.42■■□□□ 1.02
PPFIA3-207ENST00000602716 GREM2Q9H772 168 aa21.42■■□□□ 1.02
PPFIA3-207ENST00000602716 COPRSQ9NQ92 184 aa21.42■■□□□ 1.02
PPFIA3-207ENST00000602716 LAMB2P55268 1798 aa21.42■■□□□ 1.02
PPFIA3-207ENST00000602716 COL4A1P02462 1669 aa21.41■■□□□ 1.02
PPFIA3-207ENST00000602716 SASH1O94885 1247 aa21.41■■□□□ 1.02
PPFIA3-207ENST00000602716 OS9Q13438 667 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-207ENST00000602716 PNPLA7Q6ZV29 1317 aa21.41■■□□□ 1.02
PPFIA3-207ENST00000602716 TSHZ3Q63HK5 1081 aa21.41■■□□□ 1.02
PPFIA3-207ENST00000602716 PLEKHM2Q8IWE5 1019 aa21.41■■□□□ 1.02
PPFIA3-207ENST00000602716 SALL3Q9BXA9 1300 aa21.41■■□□□ 1.02
PPFIA3-207ENST00000602716 PDE8AO60658 829 aa21.4■■□□□ 1.02
PPFIA3-207ENST00000602716 RAB11FIP3O75154 756 aa21.4■■□□□ 1.02
PPFIA3-207ENST00000602716 SETDB2Q96T68 719 aa21.4■■□□□ 1.02
PPFIA3-207ENST00000602716 KIF1BPQ96EK5 621 aa21.39■■□□□ 1.02
PPFIA3-207ENST00000602716 PUS3Q9BZE2 481 aaKnown RBP21.39■■□□□ 1.01
PPFIA3-207ENST00000602716 LRRC24Q50LG9 513 aa21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 TNRC6CQ9HCJ0 1690 aaKnown RBP21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 MYH3P11055 1940 aa21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 LRP5O75197 1615 aa21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 ITGA6P23229 1130 aa21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 BAG6P46379 1132 aa21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 G3BP1Q13283 466 aaKnown RBP eCLIP21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 NBPF5PQ86XG9 351 aaPredicted RBP21.38■■□□□ 1.01
PPFIA3-207ENST00000602716 CARMIL3Q8ND23 1372 aa21.37■■□□□ 1.01
PPFIA3-207ENST00000602716 DDR1Q08345 913 aa21.37■■□□□ 1.01
PPFIA3-207ENST00000602716 SF3B2Q13435 895 aaKnown RBP21.37■■□□□ 1.01
PPFIA3-207ENST00000602716 HSP90AB4PQ58FF6 505 aa21.37■■□□□ 1.01
PPFIA3-207ENST00000602716 ATG9AQ7Z3C6 839 aa21.37■■□□□ 1.01
PPFIA3-207ENST00000602716 GSPT1P15170 499 aaKnown RBP21.36■■□□□ 1.01
PPFIA3-207ENST00000602716 CCDC57Q2TAC2 916 aa21.36■■□□□ 1.01
PPFIA3-207ENST00000602716 SEC31BQ9NQW1 1179 aa21.36■■□□□ 1.01
PPFIA3-207ENST00000602716 IFIT5Q13325 482 aaKnown RBP21.35■■□□□ 1.01
PPFIA3-207ENST00000602716 RIC1Q4ADV7 1423 aa21.35■■□□□ 1.01
PPFIA3-207ENST00000602716 TFCP2Q12800 502 aa21.34■■□□□ 1.01
PPFIA3-207ENST00000602716 SLC15A2Q16348 729 aa21.34■■□□□ 1.01
PPFIA3-207ENST00000602716 TLR7Q9NYK1 1049 aaKnown RBP21.34■■□□□ 1.01
PPFIA3-207ENST00000602716 CASZ1Q86V15 1759 aa21.34■■□□□ 1.01
PPFIA3-207ENST00000602716 ERC1Q8IUD2 1116 aa21.34■■□□□ 1.01
PPFIA3-207ENST00000602716 EYA2O00167 538 aa21.33■■□□□ 1.01
PPFIA3-207ENST00000602716 TM4SF1P30408 202 aa21.33■■□□□ 1.01
PPFIA3-207ENST00000602716 PDE1AP54750 535 aa21.33■■□□□ 1.01
PPFIA3-207ENST00000602716 MSL1Q68DK7 614 aa21.33■■□□□ 1.01
PPFIA3-207ENST00000602716 EAF2Q96CJ1 260 aaPredicted RBP21.33■■□□□ 1.01
PPFIA3-207ENST00000602716 MX1P20591 662 aa21.33■■□□□ 1
PPFIA3-207ENST00000602716 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1
PPFIA3-207ENST00000602716 PDGFDQ9GZP0 370 aaPredicted RBP21.33■■□□□ 1
PPFIA3-207ENST00000602716 NYXQ9GZU5 481 aa21.33■■□□□ 1
PPFIA3-207ENST00000602716 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 POLRMTO00411 1230 aaKnown RBP21.31■■□□□ 1
PPFIA3-207ENST00000602716 PRR5LQ6MZQ0 368 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 AACSQ86V21 672 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 TAF7LQ5H9L4 462 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 SLC10A5Q5PT55 438 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 TTC22Q5TAA0 569 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 TPTE2Q6XPS3 522 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 CNBD1Q8NA66 436 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 STK32BQ9NY57 414 aa21.31■■□□□ 1
PPFIA3-207ENST00000602716 CLASRPQ8N2M8 674 aaKnown RBP21.3■■□□□ 1
PPFIA3-207ENST00000602716 CCDC8Q9H0W5 538 aaPredicted RBP21.3■■□□□ 1
PPFIA3-207ENST00000602716 RTL9Q8NET4 1388 aa21.3■■□□□ 1
PPFIA3-207ENST00000602716 CIAO1O76071 339 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 SERPINB2P05120 415 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 HMGB2P26583 209 aaKnown RBP21.29■■□□□ 1
PPFIA3-207ENST00000602716 CCDC152Q4G0S7 254 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 ZNF609O15014 1411 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 TNNI3KQ59H18 835 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 BMP2KLQ5H9B9 411 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 OSBPL3Q9H4L5 887 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 FPGT-TNNI3KV9GXZ4 949 aa21.29■■□□□ 1
PPFIA3-207ENST00000602716 IL15P40933 162 aaPredicted RBP21.28■■□□□ 1
PPFIA3-207ENST00000602716 SF3B3Q15393 1217 aaKnown RBP21.28■■□□□ 1
PPFIA3-207ENST00000602716 STAP2Q9UGK3 403 aa21.28■■□□□ 1
PPFIA3-207ENST00000602716 NPHP1O15259 732 aa21.28■■□□□ 1
PPFIA3-207ENST00000602716 SLC51AQ86UW1 340 aa21.28■■□□□ 1
PPFIA3-207ENST00000602716 FLAD1Q8NFF5 587 aa21.28■■□□□ 1
PPFIA3-207ENST00000602716 PI4K2BQ8TCG2 481 aa21.28■■□□□ 1
PPFIA3-207ENST00000602716 RIPOR2Q9Y4F9 1068 aa21.28■■□□□ 1
PPFIA3-207ENST00000602716 SPEF2Q9C093 1822 aa21.27■■□□□ 1
PPFIA3-207ENST00000602716 LDHAL6AQ6ZMR3 332 aa21.27■■□□□ 1
PPFIA3-207ENST00000602716 DBNLQ9UJU6 430 aaKnown RBP21.27■■□□□ 1
PPFIA3-207ENST00000602716 QSER1Q2KHR3 1735 aa21.26■□□□□ 0.99
PPFIA3-207ENST00000602716 TAF1P21675 1872 aa21.26■□□□□ 0.99
PPFIA3-207ENST00000602716 IFIT2P09913 472 aaKnown RBP21.26■□□□□ 0.99
PPFIA3-207ENST00000602716 MMP10P09238 476 aa21.25■□□□□ 0.99
PPFIA3-207ENST00000602716 HSP90B1P14625 803 aaKnown RBP21.25■□□□□ 0.99
PPFIA3-207ENST00000602716 CELF1Q92879 486 aaKnown RBP21.25■□□□□ 0.99
PPFIA3-207ENST00000602716 DBNDD2Q9BQY9 259 aa21.25■□□□□ 0.99
PPFIA3-207ENST00000602716 CNNM1Q9NRU3 951 aa21.25■□□□□ 0.99
PPFIA3-207ENST00000602716 SLC4A3P48751 1232 aa21.24■□□□□ 0.99
PPFIA3-207ENST00000602716 NLGN1Q8N2Q7 840 aa21.24■□□□□ 0.99
PPFIA3-207ENST00000602716 VGLL2Q8N8G2 317 aa21.24■□□□□ 0.99
PPFIA3-207ENST00000602716 NLRP3Q96P20 1036 aa21.24■□□□□ 0.99
PPFIA3-207ENST00000602716 SEC24BO95487 1268 aa21.24■□□□□ 0.99
PPFIA3-207ENST00000602716 SDSP20132 328 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms