RNA–Protein interactions for RNA: ENST00000602212.5

NPAS1-208, Transcript of neuronal PAS domain protein 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,117 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPAS1-208	ENST00000602212	EPB41L2	O43491	1005 aa	Known RBP	27.71	■■■□□ 2.03
NPAS1-208	ENST00000602212	ATP5J	P18859	108 aa		27.71	■■■□□ 2.03
NPAS1-208	ENST00000602212	FAM182B	Q5T319	152 aa		27.71	■■■□□ 2.03
NPAS1-208	ENST00000602212	MCC	P23508	829 aa		27.71	■■■□□ 2.03
NPAS1-208	ENST00000602212	BCOR	Q6W2J9	1755 aa		27.7	■■■□□ 2.03
NPAS1-208	ENST00000602212	CTSW	P56202	376 aa		27.7	■■■□□ 2.03
NPAS1-208	ENST00000602212	IFIT5	Q13325	482 aa	Known RBP	27.7	■■■□□ 2.03
NPAS1-208	ENST00000602212	TTLL11	Q8NHH1	800 aa		27.7	■■■□□ 2.03
NPAS1-208	ENST00000602212	ZNF609	O15014	1411 aa		27.7	■■■□□ 2.03
NPAS1-208	ENST00000602212		K7ELQ4	463 aa	Predicted RBP	27.7	■■■□□ 2.02
NPAS1-208	ENST00000602212	FBXO3	Q9UK99	471 aa		27.7	■■■□□ 2.02
NPAS1-208	ENST00000602212	KCNQ4	P56696	695 aa		27.69	■■■□□ 2.02
NPAS1-208	ENST00000602212	RUFY2	Q8WXA3	655 aa		27.68	■■■□□ 2.02
NPAS1-208	ENST00000602212	TRPC5	Q9UL62	973 aa	Predicted RBP	27.68	■■■□□ 2.02
NPAS1-208	ENST00000602212	PALD1	Q9ULE6	856 aa		27.68	■■■□□ 2.02
NPAS1-208	ENST00000602212	GREM2	Q9H772	168 aa		27.68	■■■□□ 2.02
NPAS1-208	ENST00000602212	RAD50	Q92878	1312 aa		27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	PDE8A	O60658	829 aa		27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	SUSD4	Q5VX71	490 aa		27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	LSG1	Q9H089	658 aa	Known RBP	27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	ONECUT3	O60422	494 aa	Predicted RBP	27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	ANAPC15	P60006	121 aa		27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	TAF7L	Q5H9L4	462 aa		27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	SBF2	Q86WG5	1849 aa		27.67	■■■□□ 2.02
NPAS1-208	ENST00000602212	CNTNAP4	Q9C0A0	1308 aa		27.66	■■■□□ 2.02
NPAS1-208	ENST00000602212	TIMM10	P62072	90 aa		27.66	■■■□□ 2.02
NPAS1-208	ENST00000602212	NEUROD6	Q96NK8	337 aa		27.66	■■■□□ 2.02
NPAS1-208	ENST00000602212	FSD1	Q9BTV5	496 aa		27.66	■■■□□ 2.02
NPAS1-208	ENST00000602212	HIP1	O00291	1037 aa		27.65	■■■□□ 2.02
NPAS1-208	ENST00000602212	ITGA6	P23229	1130 aa		27.65	■■■□□ 2.02
NPAS1-208	ENST00000602212	NFKBIB	Q15653	356 aa		27.65	■■■□□ 2.02
NPAS1-208	ENST00000602212	IL17RA	Q96F46	866 aa		27.65	■■■□□ 2.02
NPAS1-208	ENST00000602212	EDC3	Q96F86	508 aa	Known RBP	27.65	■■■□□ 2.02
NPAS1-208	ENST00000602212	CEP126	Q9P2H0	1117 aa		27.65	■■■□□ 2.02
NPAS1-208	ENST00000602212	HSPA4	P34932	840 aa		27.64	■■■□□ 2.02
NPAS1-208	ENST00000602212	PARP10	Q53GL7	1025 aa		27.64	■■■□□ 2.02
NPAS1-208	ENST00000602212	SH3TC1	Q8TE82	1336 aa		27.64	■■■□□ 2.01
NPAS1-208	ENST00000602212		A0A1B0GUL7	405 aa		27.64	■■■□□ 2.01
NPAS1-208	ENST00000602212	HAUS7	Q99871	368 aa		27.64	■■■□□ 2.01
NPAS1-208	ENST00000602212	ANKRD18B	A2A2Z9	1011 aa		27.63	■■■□□ 2.01
NPAS1-208	ENST00000602212	ST18	O60284	1047 aa		27.63	■■■□□ 2.01
NPAS1-208	ENST00000602212	KIAA1211	Q6ZU35	1233 aa		27.63	■■■□□ 2.01
NPAS1-208	ENST00000602212	UTP14A	Q9BVJ6	771 aa	Known RBP	27.63	■■■□□ 2.01
NPAS1-208	ENST00000602212	RIC1	Q4ADV7	1423 aa		27.63	■■■□□ 2.01
NPAS1-208	ENST00000602212	DDX60	Q8IY21	1712 aa	Known RBP	27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	SEPT12	Q8IYM1	358 aa		27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	AK7	Q96M32	723 aa		27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	FAM227B	Q96M60	508 aa		27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	LY75	O60449	1722 aa		27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	NMI	Q13287	307 aa	Predicted RBP	27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	NDUFB9	Q9Y6M9	179 aa		27.62	■■■□□ 2.01
NPAS1-208	ENST00000602212	FAM177B	A6PVY3	158 aa		27.61	■■■□□ 2.01
NPAS1-208	ENST00000602212	ZNF652	Q9Y2D9	606 aa		27.61	■■■□□ 2.01
NPAS1-208	ENST00000602212	DDIT3	P35638	169 aa		27.61	■■■□□ 2.01
NPAS1-208	ENST00000602212	DNAJC2	Q99543	621 aa	Known RBP	27.61	■■■□□ 2.01
NPAS1-208	ENST00000602212	LAMB2	P55268	1798 aa		27.6	■■■□□ 2.01
NPAS1-208	ENST00000602212	SCN7A	Q01118	1682 aa		27.6	■■■□□ 2.01
NPAS1-208	ENST00000602212	RIPOR2	Q9Y4F9	1068 aa		27.6	■■■□□ 2.01
NPAS1-208	ENST00000602212	LRP5	O75197	1615 aa		27.6	■■■□□ 2.01
NPAS1-208	ENST00000602212	NTSR2	O95665	410 aa		27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212	HCLS1	P14317	486 aa	Predicted RBP	27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212	LDHAL6A	Q6ZMR3	332 aa		27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212	SNRK	Q9NRH2	765 aa		27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212	AKAP2	Q9Y2D5	859 aa		27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212		A0A0D9SFI3	127 aa		27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212	CLEC4G	Q6UXB4	293 aa		27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212	CHMP5	Q9NZZ3	219 aa		27.59	■■■□□ 2.01
NPAS1-208	ENST00000602212	RFX7	Q2KHR2	1363 aa		27.58	■■■□□ 2.01
NPAS1-208	ENST00000602212	RC3H1	Q5TC82	1133 aa	Known RBP	27.58	■■■□□ 2.01
NPAS1-208	ENST00000602212	CCNL1	Q9UK58	526 aa	Predicted RBP	27.58	■■■□□ 2.01
NPAS1-208	ENST00000602212	HSP90AA1	P07900	732 aa	Known RBP	27.58	■■■□□ 2.01
NPAS1-208	ENST00000602212	NEK4	P51957	841 aa		27.58	■■■□□ 2.01
NPAS1-208	ENST00000602212	PTH1R	Q03431	593 aa		27.58	■■■□□ 2.01
NPAS1-208	ENST00000602212	TAF1L	Q8IZX4	1826 aa		27.57	■■■□□ 2
NPAS1-208	ENST00000602212	QTRT2	Q9H974	415 aa	Known RBP	27.57	■■■□□ 2
NPAS1-208	ENST00000602212	DDX46	Q7L014	1031 aa	Known RBP	27.56	■■■□□ 2
NPAS1-208	ENST00000602212	MED23	Q9ULK4	1368 aa		27.56	■■■□□ 2
NPAS1-208	ENST00000602212	METTL24	Q5JXM2	366 aa		27.56	■■■□□ 2
NPAS1-208	ENST00000602212	CNNM1	Q9NRU3	951 aa		27.56	■■■□□ 2
NPAS1-208	ENST00000602212	CCDC171	Q6TFL3	1326 aa		27.56	■■■□□ 2
NPAS1-208	ENST00000602212	SMIM5	Q71RC9	77 aa		27.55	■■■□□ 2
NPAS1-208	ENST00000602212	FRAT2	O75474	233 aa	Predicted RBP	27.55	■■■□□ 2
NPAS1-208	ENST00000602212	ADORA1	P30542	326 aa		27.55	■■■□□ 2
NPAS1-208	ENST00000602212	XAGE2	Q96GT9	111 aa		27.55	■■■□□ 2
NPAS1-208	ENST00000602212	FOXD4L1	Q9NU39	408 aa		27.55	■■■□□ 2
NPAS1-208	ENST00000602212	SNX14	Q9Y5W7	946 aa		27.55	■■■□□ 2
NPAS1-208	ENST00000602212	RPS6KA4	O75676	772 aa		27.54	■■■□□ 2
NPAS1-208	ENST00000602212	KBTBD3	Q8NAB2	608 aa		27.54	■■■□□ 2
NPAS1-208	ENST00000602212	SPEF2	Q9C093	1822 aa		27.54	■■■□□ 2
NPAS1-208	ENST00000602212	PAG1	Q9NWQ8	432 aa		27.54	■■■□□ 2
NPAS1-208	ENST00000602212	GNPAT	O15228	680 aa		27.53	■■■□□ 2
NPAS1-208	ENST00000602212	IFIT1	P09914	478 aa	Known RBP	27.53	■■■□□ 2
NPAS1-208	ENST00000602212	RASEF	Q8IZ41	740 aa		27.53	■■■□□ 2
NPAS1-208	ENST00000602212	VGLL2	Q8N8G2	317 aa		27.53	■■■□□ 2
NPAS1-208	ENST00000602212	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	27.53	■■■□□ 2
NPAS1-208	ENST00000602212	GOLIM4	O00461	696 aa		27.52	■■■□□ 2
NPAS1-208	ENST00000602212	RGL2	O15211	777 aa		27.52	■■■□□ 2
NPAS1-208	ENST00000602212	ATP2B3	Q16720	1220 aa		27.52	■■■□□ 2
NPAS1-208	ENST00000602212	HSP90B1	P14625	803 aa	Known RBP	27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms