RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 DUSP27Q5VZP5 1158 aa18.52■□□□□ 0.56
NEAT1-203ENST00000601801 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
NEAT1-203ENST00000601801 LARGE2Q8N3Y3 721 aa18.52■□□□□ 0.56
NEAT1-203ENST00000601801 MBIPQ9NS73 344 aa18.52■□□□□ 0.56
NEAT1-203ENST00000601801 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
NEAT1-203ENST00000601801 ATP6V0A2Q9Y487 856 aa18.52■□□□□ 0.56
NEAT1-203ENST00000601801 GTF3C3Q9Y5Q9 886 aa18.52■□□□□ 0.56
NEAT1-203ENST00000601801 ABCC4O15439 1325 aa18.51■□□□□ 0.55
NEAT1-203ENST00000601801 LAMB2P55268 1798 aa18.51■□□□□ 0.55
NEAT1-203ENST00000601801 HCLS1P14317 486 aaPredicted RBP18.51■□□□□ 0.55
NEAT1-203ENST00000601801 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
NEAT1-203ENST00000601801 BBOX1O75936 387 aa18.5■□□□□ 0.55
NEAT1-203ENST00000601801 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
NEAT1-203ENST00000601801 GNAI1P63096 354 aa18.5■□□□□ 0.55
NEAT1-203ENST00000601801 DDX46Q7L014 1031 aaKnown RBP18.5■□□□□ 0.55
NEAT1-203ENST00000601801 ECE1P42892 770 aa18.49■□□□□ 0.55
NEAT1-203ENST00000601801 RGS19P49795 217 aa18.49■□□□□ 0.55
NEAT1-203ENST00000601801 FMR1Q06787 632 aaKnown RBP eCLIP18.49■□□□□ 0.55
NEAT1-203ENST00000601801 NIM1KQ8IY84 436 aa18.49■□□□□ 0.55
NEAT1-203ENST00000601801 CAPNS2Q96L46 248 aa18.49■□□□□ 0.55
NEAT1-203ENST00000601801 GJA3Q9Y6H8 435 aa18.49■□□□□ 0.55
NEAT1-203ENST00000601801 PPIP5K2O43314 1243 aa18.48■□□□□ 0.55
NEAT1-203ENST00000601801 LMOD1P29536 600 aaPredicted RBP18.48■□□□□ 0.55
NEAT1-203ENST00000601801 MLLT1Q03111 559 aaPredicted RBP18.48■□□□□ 0.55
NEAT1-203ENST00000601801 SLC51AQ86UW1 340 aa18.48■□□□□ 0.55
NEAT1-203ENST00000601801 SP8Q8IXZ3 490 aa18.48■□□□□ 0.55
NEAT1-203ENST00000601801 SUPT20HQ8NEM7 779 aa18.48■□□□□ 0.55
NEAT1-203ENST00000601801 VPS33BQ9H267 617 aa18.48■□□□□ 0.55
NEAT1-203ENST00000601801 CCDC85CA6NKD9 419 aa18.47■□□□□ 0.55
NEAT1-203ENST00000601801 SCNN1DP51172 638 aa18.47■□□□□ 0.55
NEAT1-203ENST00000601801 CYP4F22Q6NT55 531 aa18.47■□□□□ 0.55
NEAT1-203ENST00000601801 GPR101Q96P66 508 aaPredicted RBP18.47■□□□□ 0.55
NEAT1-203ENST00000601801 ISCA1Q9BUE6 129 aa18.47■□□□□ 0.55
NEAT1-203ENST00000601801 BEGAINQ9BUH8 593 aa18.47■□□□□ 0.55
NEAT1-203ENST00000601801 ATP5J2-PTCD1G3V325 749 aa18.46■□□□□ 0.55
NEAT1-203ENST00000601801 ELL2O00472 640 aaPredicted RBP18.46■□□□□ 0.55
NEAT1-203ENST00000601801 EPS15P42566 896 aa18.46■□□□□ 0.55
NEAT1-203ENST00000601801 GRAPQ13588 217 aa18.46■□□□□ 0.55
NEAT1-203ENST00000601801 AOC3Q16853 763 aa18.46■□□□□ 0.55
NEAT1-203ENST00000601801 CST9Q5W186 159 aa18.46■□□□□ 0.55
NEAT1-203ENST00000601801 DPP8Q6V1X1 898 aaPredicted RBP18.46■□□□□ 0.55
NEAT1-203ENST00000601801 PAXIP1Q6ZW49 1069 aaPredicted RBP18.46■□□□□ 0.55
NEAT1-203ENST00000601801 USP50Q70EL3 339 aaPredicted RBP18.46■□□□□ 0.55
NEAT1-203ENST00000601801 MPNDQ8N594 471 aa18.46■□□□□ 0.55
NEAT1-203ENST00000601801 GRAPLQ8TC17 118 aaPredicted RBP18.46■□□□□ 0.55
NEAT1-203ENST00000601801 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
NEAT1-203ENST00000601801 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
NEAT1-203ENST00000601801 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
NEAT1-203ENST00000601801 TMC4Q7Z404 712 aa18.45■□□□□ 0.54
NEAT1-203ENST00000601801 FAM89AQ96GI7 184 aa18.45■□□□□ 0.54
NEAT1-203ENST00000601801 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
NEAT1-203ENST00000601801 TLL2Q9Y6L7 1015 aa18.45■□□□□ 0.54
NEAT1-203ENST00000601801 DDX60Q8IY21 1712 aaKnown RBP18.45■□□□□ 0.54
NEAT1-203ENST00000601801 RIC3Q7Z5B4 369 aa18.44■□□□□ 0.54
NEAT1-203ENST00000601801 TAF1P21675 1872 aa18.43■□□□□ 0.54
NEAT1-203ENST00000601801 CASP8AP2Q9UKL3 1982 aa18.43■□□□□ 0.54
NEAT1-203ENST00000601801 TRAF5O00463 557 aa18.43■□□□□ 0.54
NEAT1-203ENST00000601801 MAP2K2P36507 400 aa18.43■□□□□ 0.54
NEAT1-203ENST00000601801 GRM1Q13255 1194 aa18.43■□□□□ 0.54
NEAT1-203ENST00000601801 TRIM28Q13263 835 aaKnown RBP18.43■□□□□ 0.54
NEAT1-203ENST00000601801 ZNRF3Q9ULT6 936 aa18.43■□□□□ 0.54
NEAT1-203ENST00000601801 SF3B3Q15393 1217 aaKnown RBP18.42■□□□□ 0.54
NEAT1-203ENST00000601801 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
NEAT1-203ENST00000601801 C8orf58Q8NAV2 365 aa18.42■□□□□ 0.54
NEAT1-203ENST00000601801 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
NEAT1-203ENST00000601801 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
NEAT1-203ENST00000601801 AOC2O75106 756 aa18.41■□□□□ 0.54
NEAT1-203ENST00000601801 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
NEAT1-203ENST00000601801 CCDC30Q5VVM6 783 aa18.41■□□□□ 0.54
NEAT1-203ENST00000601801 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
NEAT1-203ENST00000601801 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
NEAT1-203ENST00000601801 CXCL9Q07325 125 aa18.4■□□□□ 0.54
NEAT1-203ENST00000601801 CCDC184Q52MB2 194 aa18.4■□□□□ 0.54
NEAT1-203ENST00000601801 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
NEAT1-203ENST00000601801 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
NEAT1-203ENST00000601801 SAPCD2Q86UD0 394 aa18.39■□□□□ 0.53
NEAT1-203ENST00000601801 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
NEAT1-203ENST00000601801 MYD88Q99836 296 aa18.39■□□□□ 0.53
NEAT1-203ENST00000601801 ADARB2Q9NS39 739 aaKnown RBP18.39■□□□□ 0.53
NEAT1-203ENST00000601801 PCDH10Q9P2E7 1040 aa18.39■□□□□ 0.53
NEAT1-203ENST00000601801 CA12O43570 354 aa18.38■□□□□ 0.53
NEAT1-203ENST00000601801 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
NEAT1-203ENST00000601801 CIAPIN1Q6FI81 312 aa18.38■□□□□ 0.53
NEAT1-203ENST00000601801 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
NEAT1-203ENST00000601801 CELF1Q92879 486 aaKnown RBP18.38■□□□□ 0.53
NEAT1-203ENST00000601801 HHIPL1Q96JK4 782 aa18.38■□□□□ 0.53
NEAT1-203ENST00000601801 MCOLN1Q9GZU1 580 aa18.38■□□□□ 0.53
NEAT1-203ENST00000601801 GPRC5DQ9NZD1 345 aa18.38■□□□□ 0.53
NEAT1-203ENST00000601801 NSFL1CQ9UNZ2 370 aaKnown RBP18.38■□□□□ 0.53
NEAT1-203ENST00000601801 TNIP1Q15025 636 aa18.37■□□□□ 0.53
NEAT1-203ENST00000601801 RAD17O75943 681 aa18.36■□□□□ 0.53
NEAT1-203ENST00000601801 CELF2O95319 508 aaKnown RBP18.36■□□□□ 0.53
NEAT1-203ENST00000601801 BRPF1P55201 1214 aaPredicted RBP18.36■□□□□ 0.53
NEAT1-203ENST00000601801 RPS8P62241 208 aaKnown RBP18.36■□□□□ 0.53
NEAT1-203ENST00000601801 WASHC4Q2M389 1173 aa18.36■□□□□ 0.53
NEAT1-203ENST00000601801 WWC1Q8IX03 1113 aa18.36■□□□□ 0.53
NEAT1-203ENST00000601801 TSPYL6Q8N831 410 aa18.36■□□□□ 0.53
NEAT1-203ENST00000601801 TSR2Q969E8 191 aaKnown RBP18.36■□□□□ 0.53
NEAT1-203ENST00000601801 METTL22Q9BUU2 404 aaPredicted RBP18.36■□□□□ 0.53
NEAT1-203ENST00000601801 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms