RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
USE1-210ENST00000601662 SOGA3Q5TF21 947 aa18.2■□□□□ 0.5
USE1-210ENST00000601662 TMEM57Q8N5G2 664 aa18.2■□□□□ 0.5
USE1-210ENST00000601662 C7orf43Q8WVR3 580 aa18.2■□□□□ 0.5
USE1-210ENST00000601662 CRAMP1Q96RY5 1269 aa18.2■□□□□ 0.5
USE1-210ENST00000601662 RIC1Q4ADV7 1423 aa18.2■□□□□ 0.5
USE1-210ENST00000601662 ALDH1L1O75891 902 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 RLBP1P12271 317 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 LMNB1P20700 586 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 PRELPP51888 382 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 AAMPQ13685 434 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 MVPQ14764 893 aaKnown RBP18.19■□□□□ 0.5
USE1-210ENST00000601662 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 DDX46Q7L014 1031 aaKnown RBP18.19■□□□□ 0.5
USE1-210ENST00000601662 ZBTB38Q8NAP3 1195 aaPredicted RBP18.19■□□□□ 0.5
USE1-210ENST00000601662 LINS1Q8NG48 757 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 SRCIN1Q9C0H9 1055 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
USE1-210ENST00000601662 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
USE1-210ENST00000601662 PPEF1O14829 653 aaPredicted RBP18.18■□□□□ 0.5
USE1-210ENST00000601662 BEND3Q5T5X7 828 aa18.18■□□□□ 0.5
USE1-210ENST00000601662 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
USE1-210ENST00000601662 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
USE1-210ENST00000601662 COG6Q9Y2V7 657 aa18.18■□□□□ 0.5
USE1-210ENST00000601662 PCCAP05165 728 aaPredicted RBP18.17■□□□□ 0.5
USE1-210ENST00000601662 SLC51AQ86UW1 340 aa18.17■□□□□ 0.5
USE1-210ENST00000601662 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
USE1-210ENST00000601662 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
USE1-210ENST00000601662 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
USE1-210ENST00000601662 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
USE1-210ENST00000601662 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
USE1-210ENST00000601662 TMX4Q9H1E5 349 aaPredicted RBP18.16■□□□□ 0.5
USE1-210ENST00000601662 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
USE1-210ENST00000601662 ZNF277Q9NRM2 450 aaPredicted RBP18.15■□□□□ 0.5
USE1-210ENST00000601662 SBF1O95248 1867 aa18.14■□□□□ 0.49
USE1-210ENST00000601662 FKBP4Q02790 459 aaKnown RBP eCLIP18.14■□□□□ 0.49
USE1-210ENST00000601662 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.49
USE1-210ENST00000601662 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
USE1-210ENST00000601662 ZBTB7BO15156 539 aaPredicted RBP18.13■□□□□ 0.49
USE1-210ENST00000601662 PDE8AO60658 829 aa18.13■□□□□ 0.49
USE1-210ENST00000601662 BBOX1O75936 387 aa18.13■□□□□ 0.49
USE1-210ENST00000601662 GNAI3P08754 354 aa18.13■□□□□ 0.49
USE1-210ENST00000601662 HSP90B1P14625 803 aaKnown RBP18.13■□□□□ 0.49
USE1-210ENST00000601662 GRAPQ13588 217 aa18.13■□□□□ 0.49
USE1-210ENST00000601662 GCKRQ14397 625 aa18.13■□□□□ 0.49
USE1-210ENST00000601662 CC2D2BQ6DHV5 1058 aa18.13■□□□□ 0.49
USE1-210ENST00000601662 UBE3BQ7Z3V4 1068 aa18.13■□□□□ 0.49
USE1-210ENST00000601662 GRAPLQ8TC17 118 aaPredicted RBP18.13■□□□□ 0.49
USE1-210ENST00000601662 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
USE1-210ENST00000601662 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
USE1-210ENST00000601662 CELF1Q92879 486 aaKnown RBP18.12■□□□□ 0.49
USE1-210ENST00000601662 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
USE1-210ENST00000601662 ATP6V0A2Q9Y487 856 aa18.12■□□□□ 0.49
USE1-210ENST00000601662 LTBP3Q9NS15 1303 aa18.12■□□□□ 0.49
USE1-210ENST00000601662 LAMB2P55268 1798 aa18.12■□□□□ 0.49
USE1-210ENST00000601662 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
USE1-210ENST00000601662 DDX60Q8IY21 1712 aaKnown RBP18.11■□□□□ 0.49
USE1-210ENST00000601662 TAF1P21675 1872 aa18.1■□□□□ 0.49
USE1-210ENST00000601662 CDHR2Q9BYE9 1310 aa18.1■□□□□ 0.49
USE1-210ENST00000601662 H7C1W4 665 aa18.1■□□□□ 0.49
USE1-210ENST00000601662 CCDC152Q4G0S7 254 aa18.1■□□□□ 0.49
USE1-210ENST00000601662 SP8Q8IXZ3 490 aa18.1■□□□□ 0.49
USE1-210ENST00000601662 USP44Q9H0E7 712 aa18.1■□□□□ 0.49
USE1-210ENST00000601662 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
USE1-210ENST00000601662 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
USE1-210ENST00000601662 GRM8O00222 908 aa18.09■□□□□ 0.49
USE1-210ENST00000601662 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
USE1-210ENST00000601662 UBTFL1P0CB47 393 aaPredicted RBP18.08■□□□□ 0.48
USE1-210ENST00000601662 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
USE1-210ENST00000601662 CTSWP56202 376 aa18.08■□□□□ 0.48
USE1-210ENST00000601662 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.48
USE1-210ENST00000601662 DPP8Q6V1X1 898 aaPredicted RBP18.08■□□□□ 0.48
USE1-210ENST00000601662 MPNDQ8N594 471 aa18.08■□□□□ 0.48
USE1-210ENST00000601662 PSMD1Q99460 953 aa18.08■□□□□ 0.48
USE1-210ENST00000601662 RRAGCQ9HB90 399 aa18.08■□□□□ 0.48
USE1-210ENST00000601662 UTYO14607 1347 aa18.07■□□□□ 0.48
USE1-210ENST00000601662 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
USE1-210ENST00000601662 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
USE1-210ENST00000601662 DPY19L2Q6NUT2 758 aa18.07■□□□□ 0.48
USE1-210ENST00000601662 TTLL11Q8NHH1 800 aa18.07■□□□□ 0.48
USE1-210ENST00000601662 MEIS3Q99687 375 aa18.07■□□□□ 0.48
USE1-210ENST00000601662 ZC3H4Q9UPT8 1303 aaKnown RBP18.06■□□□□ 0.48
USE1-210ENST00000601662 GNAI2P04899 355 aa18.06■□□□□ 0.48
USE1-210ENST00000601662 TMC4Q7Z404 712 aa18.06■□□□□ 0.48
USE1-210ENST00000601662 LARGE2Q8N3Y3 721 aa18.06■□□□□ 0.48
USE1-210ENST00000601662 NSFL1CQ9UNZ2 370 aaKnown RBP18.06■□□□□ 0.48
USE1-210ENST00000601662 KIF3CO14782 793 aa18.05■□□□□ 0.48
USE1-210ENST00000601662 PPIP5K2O43314 1243 aa18.05■□□□□ 0.48
USE1-210ENST00000601662 CASP7P55210 303 aa18.05■□□□□ 0.48
USE1-210ENST00000601662 JDP2Q8WYK2 163 aa18.05■□□□□ 0.48
USE1-210ENST00000601662 GREM2Q9H772 168 aa18.05■□□□□ 0.48
USE1-210ENST00000601662 DDNO94850 711 aaPredicted RBP18.04■□□□□ 0.48
USE1-210ENST00000601662 NBPF7P0C2Y1 421 aaPredicted RBP18.04■□□□□ 0.48
USE1-210ENST00000601662 AOC3Q16853 763 aa18.04■□□□□ 0.48
USE1-210ENST00000601662 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
USE1-210ENST00000601662 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
USE1-210ENST00000601662 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
USE1-210ENST00000601662 SNED1Q8TER0 1413 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms