RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MYH3P11055 1940 aa27.92■■■□□ 2.06
IRF3-228ENST00000601291 HCLS1P14317 486 aaPredicted RBP27.91■■■□□ 2.06
IRF3-228ENST00000601291 PTPN12Q05209 780 aaKnown RBP27.91■■■□□ 2.06
IRF3-228ENST00000601291 ERFEQ4G0M1 354 aa27.91■■■□□ 2.06
IRF3-228ENST00000601291 DDX60Q8IY21 1712 aaKnown RBP27.91■■■□□ 2.06
IRF3-228ENST00000601291 NPHP1O15259 732 aa27.9■■■□□ 2.06
IRF3-228ENST00000601291 PDE4AP27815 886 aa27.9■■■□□ 2.06
IRF3-228ENST00000601291 IFIT5Q13325 482 aaKnown RBP27.9■■■□□ 2.06
IRF3-228ENST00000601291 FAM161AQ3B820 660 aa27.9■■■□□ 2.06
IRF3-228ENST00000601291 RHPN1Q8TCX5 695 aa27.9■■■□□ 2.06
IRF3-228ENST00000601291 SMARCA5O60264 1052 aaPredicted RBP27.9■■■□□ 2.06
IRF3-228ENST00000601291 KLHDC4Q8TBB5 520 aa27.9■■■□□ 2.06
IRF3-228ENST00000601291 SIL1Q9H173 461 aa27.9■■■□□ 2.06
IRF3-228ENST00000601291 QSER1Q2KHR3 1735 aa27.89■■■□□ 2.06
IRF3-228ENST00000601291 NLGN1Q8N2Q7 840 aa27.89■■■□□ 2.05
IRF3-228ENST00000601291 TAF7LQ5H9L4 462 aa27.88■■■□□ 2.05
IRF3-228ENST00000601291 SLC10A5Q5PT55 438 aa27.88■■■□□ 2.05
IRF3-228ENST00000601291 CCDC85AQ96PX6 553 aaPredicted RBP27.88■■■□□ 2.05
IRF3-228ENST00000601291 ANKRD18BA2A2Z9 1011 aa27.87■■■□□ 2.05
IRF3-228ENST00000601291 TM4SF1P30408 202 aa27.87■■■□□ 2.05
IRF3-228ENST00000601291 CCDC152Q4G0S7 254 aa27.87■■■□□ 2.05
IRF3-228ENST00000601291 BCL11AQ9H165 835 aa27.87■■■□□ 2.05
IRF3-228ENST00000601291 GREM2Q9H772 168 aa27.87■■■□□ 2.05
IRF3-228ENST00000601291 ITGA6P23229 1130 aa27.86■■■□□ 2.05
IRF3-228ENST00000601291 CNBD1Q8NA66 436 aa27.86■■■□□ 2.05
IRF3-228ENST00000601291 ABCC12Q96J65 1359 aa27.86■■■□□ 2.05
IRF3-228ENST00000601291 FBXO3Q9UK99 471 aa27.85■■■□□ 2.05
IRF3-228ENST00000601291 RTL9Q8NET4 1388 aa27.84■■■□□ 2.05
IRF3-228ENST00000601291 IL1RAPL2Q9NP60 686 aa27.84■■■□□ 2.05
IRF3-228ENST00000601291 CIAO1O76071 339 aa27.83■■■□□ 2.05
IRF3-228ENST00000601291 SERPINB2P05120 415 aa27.83■■■□□ 2.05
IRF3-228ENST00000601291 CLASRPQ8N2M8 674 aaKnown RBP27.83■■■□□ 2.05
IRF3-228ENST00000601291 NLRP3Q96P20 1036 aa27.83■■■□□ 2.05
IRF3-228ENST00000601291 EYA2O00167 538 aa27.82■■■□□ 2.04
IRF3-228ENST00000601291 IL15P40933 162 aaPredicted RBP27.82■■■□□ 2.04
IRF3-228ENST00000601291 ST5P78524 1137 aa27.82■■■□□ 2.04
IRF3-228ENST00000601291 SF3B3Q15393 1217 aaKnown RBP27.82■■■□□ 2.04
IRF3-228ENST00000601291 ZNF594Q96JF6 807 aaPredicted RBP27.82■■■□□ 2.04
IRF3-228ENST00000601291 POLRMTO00411 1230 aaKnown RBP27.82■■■□□ 2.04
IRF3-228ENST00000601291 SASH1O94885 1247 aa27.82■■■□□ 2.04
IRF3-228ENST00000601291 C16orf71Q8IYS4 520 aaPredicted RBP27.82■■■□□ 2.04
IRF3-228ENST00000601291 RIC1Q4ADV7 1423 aa27.81■■■□□ 2.04
IRF3-228ENST00000601291 DDR1Q08345 913 aa27.81■■■□□ 2.04
IRF3-228ENST00000601291 PRR5LQ6MZQ0 368 aa27.81■■■□□ 2.04
IRF3-228ENST00000601291 PLEKHM2Q8IWE5 1019 aa27.8■■■□□ 2.04
IRF3-228ENST00000601291 UPF1Q92900 1129 aaKnown RBP eCLIP27.79■■■□□ 2.04
IRF3-228ENST00000601291 ATG9AQ7Z3C6 839 aa27.78■■■□□ 2.04
IRF3-228ENST00000601291 LRP5O75197 1615 aa27.78■■■□□ 2.04
IRF3-228ENST00000601291 LDHAL6AQ6ZMR3 332 aa27.77■■■□□ 2.04
IRF3-228ENST00000601291 OTUD7AQ8TE49 926 aaPredicted RBP27.77■■■□□ 2.04
IRF3-228ENST00000601291 CDC5LQ99459 802 aaKnown RBP27.77■■■□□ 2.04
IRF3-228ENST00000601291 MX1P20591 662 aa27.77■■■□□ 2.04
IRF3-228ENST00000601291 LRRC24Q50LG9 513 aa27.77■■■□□ 2.04
IRF3-228ENST00000601291 C3orf67Q6ZVT6 689 aa27.77■■■□□ 2.04
IRF3-228ENST00000601291 CCDC24Q8N4L8 307 aa27.77■■■□□ 2.04
IRF3-228ENST00000601291 PARP3Q9Y6F1 533 aa27.77■■■□□ 2.04
IRF3-228ENST00000601291 IFIT2P09913 472 aaKnown RBP27.76■■■□□ 2.03
IRF3-228ENST00000601291 TFCP2Q12800 502 aa27.76■■■□□ 2.03
IRF3-228ENST00000601291 PUS3Q9BZE2 481 aaKnown RBP27.76■■■□□ 2.03
IRF3-228ENST00000601291 CNNM1Q9NRU3 951 aa27.76■■■□□ 2.03
IRF3-228ENST00000601291 MMP10P09238 476 aa27.75■■■□□ 2.03
IRF3-228ENST00000601291 IGHMBP2P38935 993 aaKnown RBP27.75■■■□□ 2.03
IRF3-228ENST00000601291 MSL1Q68DK7 614 aa27.75■■■□□ 2.03
IRF3-228ENST00000601291 AACSQ86V21 672 aa27.75■■■□□ 2.03
IRF3-228ENST00000601291 SEC31BQ9NQW1 1179 aa27.75■■■□□ 2.03
IRF3-228ENST00000601291 CASZ1Q86V15 1759 aa27.75■■■□□ 2.03
IRF3-228ENST00000601291 TNRC6CQ9HCJ0 1690 aaKnown RBP27.75■■■□□ 2.03
IRF3-228ENST00000601291 SALL3Q9BXA9 1300 aa27.75■■■□□ 2.03
IRF3-228ENST00000601291 MPHOSPH8Q99549 860 aa27.74■■■□□ 2.03
IRF3-228ENST00000601291 OSBPL3Q9H4L5 887 aa27.74■■■□□ 2.03
IRF3-228ENST00000601291 PDE1AP54750 535 aa27.73■■■□□ 2.03
IRF3-228ENST00000601291 CEP126Q9P2H0 1117 aa27.73■■■□□ 2.03
IRF3-228ENST00000601291 NRXN2Q9P2S2 1712 aa27.73■■■□□ 2.03
IRF3-228ENST00000601291 GPATCH3Q96I76 525 aa27.73■■■□□ 2.03
IRF3-228ENST00000601291 GPR108Q9NPR9 543 aa27.73■■■□□ 2.03
IRF3-228ENST00000601291 AOX1Q06278 1338 aa27.72■■■□□ 2.03
IRF3-228ENST00000601291 TNNI3KQ59H18 835 aa27.72■■■□□ 2.03
IRF3-228ENST00000601291 STAP2Q9UGK3 403 aa27.72■■■□□ 2.03
IRF3-228ENST00000601291 FPGT-TNNI3KV9GXZ4 949 aa27.72■■■□□ 2.03
IRF3-228ENST00000601291 BMP2KLQ5H9B9 411 aa27.71■■■□□ 2.03
IRF3-228ENST00000601291 ANKRD18AQ8IVF6 992 aa27.71■■■□□ 2.03
IRF3-228ENST00000601291 EAF2Q96CJ1 260 aaPredicted RBP27.71■■■□□ 2.03
IRF3-228ENST00000601291 RIPOR2Q9Y4F9 1068 aa27.71■■■□□ 2.03
IRF3-228ENST00000601291 METTL24Q5JXM2 366 aa27.7■■■□□ 2.03
IRF3-228ENST00000601291 TTC22Q5TAA0 569 aa27.7■■■□□ 2.03
IRF3-228ENST00000601291 DDX46Q7L014 1031 aaKnown RBP27.7■■■□□ 2.03
IRF3-228ENST00000601291 SLC16A10Q8TF71 515 aa27.7■■■□□ 2.03
IRF3-228ENST00000601291 AKAP2Q9Y2D5 859 aa27.7■■■□□ 2.03
IRF3-228ENST00000601291 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.7■■■□□ 2.03
IRF3-228ENST00000601291 MROH5Q6ZUA9 1318 aa27.7■■■□□ 2.02
IRF3-228ENST00000601291 TTC41PQ6P2S7 1318 aa27.69■■■□□ 2.02
IRF3-228ENST00000601291 RPGRQ92834 1020 aaKnown RBP27.68■■■□□ 2.02
IRF3-228ENST00000601291 CCDC8Q9H0W5 538 aaPredicted RBP27.68■■■□□ 2.02
IRF3-228ENST00000601291 ZNF609O15014 1411 aa27.68■■■□□ 2.02
IRF3-228ENST00000601291 CRY2Q49AN0 593 aa27.67■■■□□ 2.02
IRF3-228ENST00000601291 BRIP1Q9BX63 1249 aa27.67■■■□□ 2.02
IRF3-228ENST00000601291 ECHDC1Q9NTX5 307 aa27.66■■■□□ 2.02
IRF3-228ENST00000601291 ERC2O15083 957 aa27.65■■■□□ 2.02
IRF3-228ENST00000601291 BSDC1Q9NW68 430 aaPredicted RBP27.65■■■□□ 2.02
IRF3-228ENST00000601291 SPEF2Q9C093 1822 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms