RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 IGHDP01880 384 aa14.43□□□□□ -0.1
ZNF548-211ENST00000600927 C9orf131Q5VYM1 1079 aa14.43□□□□□ -0.1
ZNF548-211ENST00000600927 G2E3Q7L622 706 aa14.43□□□□□ -0.1
ZNF548-211ENST00000600927 SYNE4Q8N205 404 aa14.43□□□□□ -0.1
ZNF548-211ENST00000600927 METTL22Q9BUU2 404 aaPredicted RBP14.43□□□□□ -0.1
ZNF548-211ENST00000600927 ATP5J2-PTCD1G3V325 749 aa14.42□□□□□ -0.1
ZNF548-211ENST00000600927 DDX58O95786 925 aaKnown RBP14.42□□□□□ -0.1
ZNF548-211ENST00000600927 ALDH1B1P30837 517 aa14.42□□□□□ -0.1
ZNF548-211ENST00000600927 SOGA3Q5TF21 947 aa14.42□□□□□ -0.1
ZNF548-211ENST00000600927 KSR2Q6VAB6 950 aa14.42□□□□□ -0.1
ZNF548-211ENST00000600927 RIC3Q7Z5B4 369 aa14.42□□□□□ -0.1
ZNF548-211ENST00000600927 RPAP2Q8IXW5 612 aaPredicted RBP14.42□□□□□ -0.1
ZNF548-211ENST00000600927 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
ZNF548-211ENST00000600927 TRMT112Q9UI30 125 aaKnown RBP14.42□□□□□ -0.1
ZNF548-211ENST00000600927 IGKV5-2P06315 115 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 LMNB1P20700 586 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
ZNF548-211ENST00000600927 SMC5Q8IY18 1101 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 CCDC191Q8NCU4 936 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 RNF181Q9P0P0 153 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 HDAC5Q9UQL6 1122 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 MAP3K2Q9Y2U5 619 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 LRRC37AA6NMS7 1700 aa14.41□□□□□ -0.1
ZNF548-211ENST00000600927 COL4A1P02462 1669 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 PI4KAP2A4QPH2 592 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 GNAI3P08754 354 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 HCLS1P14317 486 aaPredicted RBP14.4□□□□□ -0.1
ZNF548-211ENST00000600927 CCDC93Q567U6 631 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 PI4KAP1Q8N8J0 262 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 ZBTB38Q8NAP3 1195 aaPredicted RBP14.4□□□□□ -0.1
ZNF548-211ENST00000600927 RPGRQ92834 1020 aaKnown RBP14.4□□□□□ -0.1
ZNF548-211ENST00000600927 GCC1Q96CN9 775 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 FAM89AQ96GI7 184 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 MYD88Q99836 296 aa14.4□□□□□ -0.1
ZNF548-211ENST00000600927 DICER1Q9UPY3 1922 aaKnown RBP14.4□□□□□ -0.1
ZNF548-211ENST00000600927 SF3B3Q15393 1217 aaKnown RBP14.39□□□□□ -0.11
ZNF548-211ENST00000600927 OLFM4Q6UX06 510 aa14.39□□□□□ -0.11
ZNF548-211ENST00000600927 RBM17Q96I25 401 aaKnown RBP14.39□□□□□ -0.11
ZNF548-211ENST00000600927 TAOK3Q9H2K8 898 aa14.39□□□□□ -0.11
ZNF548-211ENST00000600927 PCCAP05165 728 aaPredicted RBP14.38□□□□□ -0.11
ZNF548-211ENST00000600927 SLC51AQ86UW1 340 aa14.38□□□□□ -0.11
ZNF548-211ENST00000600927 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
ZNF548-211ENST00000600927 CDHR2Q9BYE9 1310 aa14.38□□□□□ -0.11
ZNF548-211ENST00000600927 NEURL1BA8MQ27 555 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 ALDH1L1O75891 902 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 FKBP4Q02790 459 aaKnown RBP eCLIP14.37□□□□□ -0.11
ZNF548-211ENST00000600927 CC2D2BQ6DHV5 1058 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 DNAAF4Q8WXU2 420 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 PSMD1Q99460 953 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 TSHZ2Q9NRE2 1034 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 CWC25Q9NXE8 425 aaPredicted RBP14.37□□□□□ -0.11
ZNF548-211ENST00000600927 CCDC88AQ3V6T2 1871 aa14.37□□□□□ -0.11
ZNF548-211ENST00000600927 DUOX1Q9NRD9 1551 aa14.36□□□□□ -0.11
ZNF548-211ENST00000600927 IRS4O14654 1257 aaPredicted RBP14.36□□□□□ -0.11
ZNF548-211ENST00000600927 PPEF1O14829 653 aaPredicted RBP14.36□□□□□ -0.11
ZNF548-211ENST00000600927 GRAPQ13588 217 aa14.36□□□□□ -0.11
ZNF548-211ENST00000600927 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
ZNF548-211ENST00000600927 GRAPLQ8TC17 118 aaPredicted RBP14.36□□□□□ -0.11
ZNF548-211ENST00000600927 SRCIN1Q9C0H9 1055 aa14.36□□□□□ -0.11
ZNF548-211ENST00000600927 GPBP1L1Q9HC44 474 aaPredicted RBP14.36□□□□□ -0.11
ZNF548-211ENST00000600927 COL4A5P29400 1685 aa14.36□□□□□ -0.11
ZNF548-211ENST00000600927 LTBP1Q14766 1721 aa14.35□□□□□ -0.11
ZNF548-211ENST00000600927 KIF3CO14782 793 aa14.35□□□□□ -0.11
ZNF548-211ENST00000600927 HMMRO75330 724 aa14.35□□□□□ -0.11
ZNF548-211ENST00000600927 CWF19L2Q2TBE0 894 aaKnown RBP14.35□□□□□ -0.11
ZNF548-211ENST00000600927 GRIPAP1Q4V328 841 aa14.35□□□□□ -0.11
ZNF548-211ENST00000600927 ATP6V0A2Q9Y487 856 aa14.35□□□□□ -0.11
ZNF548-211ENST00000600927 F6X3S4 739 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 BBOX1O75936 387 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 GNAI2P04899 355 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 CASP7P55210 303 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 NEXNQ0ZGT2 675 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 BEND3Q5T5X7 828 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
ZNF548-211ENST00000600927 LINS1Q8NG48 757 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 ZNF526Q8TF50 670 aaPredicted RBP14.34□□□□□ -0.11
ZNF548-211ENST00000600927 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
ZNF548-211ENST00000600927 TAF1P21675 1872 aa14.33□□□□□ -0.11
ZNF548-211ENST00000600927 H7C1W4 665 aa14.33□□□□□ -0.12
ZNF548-211ENST00000600927 HSP90B1P14625 803 aaKnown RBP14.33□□□□□ -0.12
ZNF548-211ENST00000600927 GCKRQ14397 625 aa14.33□□□□□ -0.12
ZNF548-211ENST00000600927 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
ZNF548-211ENST00000600927 TMC4Q7Z404 712 aa14.33□□□□□ -0.12
ZNF548-211ENST00000600927 RTFDC1Q9BY42 306 aaPredicted RBP14.33□□□□□ -0.12
ZNF548-211ENST00000600927 DCTPP1Q9H773 170 aa14.33□□□□□ -0.12
ZNF548-211ENST00000600927 RTL9Q8NET4 1388 aa14.33□□□□□ -0.12
ZNF548-211ENST00000600927 GLTPD2A6NH11 291 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 PDE8AO60658 829 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 NUCB1Q02818 461 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 SP8Q8IXZ3 490 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 CELF1Q92879 486 aaKnown RBP14.32□□□□□ -0.12
ZNF548-211ENST00000600927 MEIS3Q99687 375 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 USP44Q9H0E7 712 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 NMRK2Q9NPI5 230 aa14.32□□□□□ -0.12
ZNF548-211ENST00000600927 ZNF277Q9NRM2 450 aaPredicted RBP14.32□□□□□ -0.12
ZNF548-211ENST00000600927 MYH3P11055 1940 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms