RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
NOTCH3-205ENST00000600841 CCER2I3L3R5 266 aa21.54■■□□□ 1.04
NOTCH3-205ENST00000600841 DDNO94850 711 aaPredicted RBP21.54■■□□□ 1.04
NOTCH3-205ENST00000600841 FLIIQ13045 1269 aa21.54■■□□□ 1.04
NOTCH3-205ENST00000600841 TMC4Q7Z404 712 aa21.54■■□□□ 1.04
NOTCH3-205ENST00000600841 JDP2Q8WYK2 163 aa21.54■■□□□ 1.04
NOTCH3-205ENST00000600841 POTECB2RU33 542 aa21.52■■□□□ 1.04
NOTCH3-205ENST00000600841 IGKV5-2P06315 115 aa21.52■■□□□ 1.04
NOTCH3-205ENST00000600841 FSTL1Q12841 308 aa21.52■■□□□ 1.04
NOTCH3-205ENST00000600841 FKBP5Q13451 457 aaPredicted RBP21.52■■□□□ 1.04
NOTCH3-205ENST00000600841 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
NOTCH3-205ENST00000600841 ZNF541Q9H0D2 1346 aa21.52■■□□□ 1.03
NOTCH3-205ENST00000600841 FZD9O00144 591 aa21.51■■□□□ 1.03
NOTCH3-205ENST00000600841 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
NOTCH3-205ENST00000600841 MPNDQ8N594 471 aa21.51■■□□□ 1.03
NOTCH3-205ENST00000600841 SUPT20HQ8NEM7 779 aa21.51■■□□□ 1.03
NOTCH3-205ENST00000600841 JARID2Q92833 1246 aaPredicted RBP21.51■■□□□ 1.03
NOTCH3-205ENST00000600841 PDE8AO60658 829 aa21.5■■□□□ 1.03
NOTCH3-205ENST00000600841 SMC1BQ8NDV3 1235 aa21.5■■□□□ 1.03
NOTCH3-205ENST00000600841 CELF1Q92879 486 aaKnown RBP21.5■■□□□ 1.03
NOTCH3-205ENST00000600841 RTFDC1Q9BY42 306 aaPredicted RBP21.5■■□□□ 1.03
NOTCH3-205ENST00000600841 NEURL1BA8MQ27 555 aa21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 PPIP5K2O43314 1243 aa21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 CWF19L2Q2TBE0 894 aaKnown RBP21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 CCDC152Q4G0S7 254 aa21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 L3MBTL3Q96JM7 780 aaPredicted RBP21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 VPS33BQ9H267 617 aa21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 COL4A5P29400 1685 aa21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 CDHR2Q9BYE9 1310 aa21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 LRRC37AA6NMS7 1700 aa21.49■■□□□ 1.03
NOTCH3-205ENST00000600841 SCN4AP35499 1836 aa21.48■■□□□ 1.03
NOTCH3-205ENST00000600841 IQCA1LA6NCM1 817 aa21.48■■□□□ 1.03
NOTCH3-205ENST00000600841 EIF6P56537 245 aaKnown RBP21.48■■□□□ 1.03
NOTCH3-205ENST00000600841 NIM1KQ8IY84 436 aa21.48■■□□□ 1.03
NOTCH3-205ENST00000600841 DNAAF4Q8WXU2 420 aa21.48■■□□□ 1.03
NOTCH3-205ENST00000600841 E9PSI1 815 aa21.47■■□□□ 1.03
NOTCH3-205ENST00000600841 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
NOTCH3-205ENST00000600841 AOC3Q16853 763 aa21.47■■□□□ 1.03
NOTCH3-205ENST00000600841 GPC2Q8N158 579 aa21.47■■□□□ 1.03
NOTCH3-205ENST00000600841 APLP1P51693 650 aa21.46■■□□□ 1.03
NOTCH3-205ENST00000600841 MYH3P11055 1940 aa21.46■■□□□ 1.03
NOTCH3-205ENST00000600841 COL4A1P02462 1669 aa21.45■■□□□ 1.02
NOTCH3-205ENST00000600841 LINS1Q8NG48 757 aa21.45■■□□□ 1.02
NOTCH3-205ENST00000600841 CCDC85AQ96PX6 553 aaPredicted RBP21.45■■□□□ 1.02
NOTCH3-205ENST00000600841 SEC31BQ9NQW1 1179 aa21.45■■□□□ 1.02
NOTCH3-205ENST00000600841 CTSWP56202 376 aa21.44■■□□□ 1.02
NOTCH3-205ENST00000600841 GCKRQ14397 625 aa21.44■■□□□ 1.02
NOTCH3-205ENST00000600841 UBE3BQ7Z3V4 1068 aa21.44■■□□□ 1.02
NOTCH3-205ENST00000600841 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
NOTCH3-205ENST00000600841 GJA3Q9Y6H8 435 aa21.44■■□□□ 1.02
NOTCH3-205ENST00000600841 H7C1W4 665 aa21.43■■□□□ 1.02
NOTCH3-205ENST00000600841 KIAA2012Q0VF49 1180 aa21.43■■□□□ 1.02
NOTCH3-205ENST00000600841 TAF1DQ9H5J8 278 aaPredicted RBP21.43■■□□□ 1.02
NOTCH3-205ENST00000600841 HACL1Q9UJ83 578 aa21.43■■□□□ 1.02
NOTCH3-205ENST00000600841 DUOX1Q9NRD9 1551 aa21.43■■□□□ 1.02
NOTCH3-205ENST00000600841 F6X3S4 739 aa21.42■■□□□ 1.02
NOTCH3-205ENST00000600841 SLFN5Q08AF3 891 aa21.42■■□□□ 1.02
NOTCH3-205ENST00000600841 ZNRF3Q9ULT6 936 aa21.42■■□□□ 1.02
NOTCH3-205ENST00000600841 GPSM2P81274 684 aa21.41■■□□□ 1.02
NOTCH3-205ENST00000600841 ANKRD18AQ8IVF6 992 aa21.41■■□□□ 1.02
NOTCH3-205ENST00000600841 TTLL11Q8NHH1 800 aa21.41■■□□□ 1.02
NOTCH3-205ENST00000600841 C6orf229H3BNL8 230 aa21.4■■□□□ 1.02
NOTCH3-205ENST00000600841 EPHX2P34913 555 aa21.4■■□□□ 1.02
NOTCH3-205ENST00000600841 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
NOTCH3-205ENST00000600841 CDC5LQ99459 802 aaKnown RBP21.4■■□□□ 1.02
NOTCH3-205ENST00000600841 LTBP1Q14766 1721 aa21.39■■□□□ 1.01
NOTCH3-205ENST00000600841 LMOD1P29536 600 aaPredicted RBP21.39■■□□□ 1.01
NOTCH3-205ENST00000600841 WASHC4Q2M389 1173 aa21.39■■□□□ 1.01
NOTCH3-205ENST00000600841 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
NOTCH3-205ENST00000600841 LDHDQ86WU2 507 aa21.39■■□□□ 1.01
NOTCH3-205ENST00000600841 PLA2G12BQ9BX93 195 aa21.39■■□□□ 1.01
NOTCH3-205ENST00000600841 POLLQ9UGP5 575 aa21.39■■□□□ 1.01
NOTCH3-205ENST00000600841 RTL9Q8NET4 1388 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 POTEIP0CG38 1075 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 POTEJP0CG39 1038 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 CASP7P55210 303 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 EAPPQ56P03 285 aaPredicted RBP21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 BEND3Q5T5X7 828 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 TBC1D16Q8TBP0 767 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 CDCA7LQ96GN5 454 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 EYA3Q99504 573 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 GREM2Q9H772 168 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 ANKIB1Q9P2G1 1089 aa21.38■■□□□ 1.01
NOTCH3-205ENST00000600841 CXCL9Q07325 125 aa21.37■■□□□ 1.01
NOTCH3-205ENST00000600841 PNMA8AQ86V59 439 aaPredicted RBP21.37■■□□□ 1.01
NOTCH3-205ENST00000600841 PODXL2Q9NZ53 605 aa21.37■■□□□ 1.01
NOTCH3-205ENST00000600841 RIMBP2O15034 1052 aa21.36■■□□□ 1.01
NOTCH3-205ENST00000600841 UFL1O94874 794 aa21.36■■□□□ 1.01
NOTCH3-205ENST00000600841 SCNN1DP51172 638 aa21.36■■□□□ 1.01
NOTCH3-205ENST00000600841 CIAPIN1Q6FI81 312 aa21.36■■□□□ 1.01
NOTCH3-205ENST00000600841 GGA1Q9UJY5 639 aa21.36■■□□□ 1.01
NOTCH3-205ENST00000600841 SPEF2Q9C093 1822 aa21.36■■□□□ 1.01
NOTCH3-205ENST00000600841 RAD17O75943 681 aa21.35■■□□□ 1.01
NOTCH3-205ENST00000600841 TNIP1Q15025 636 aa21.35■■□□□ 1.01
NOTCH3-205ENST00000600841 SLC4A10Q6U841 1118 aa21.35■■□□□ 1.01
NOTCH3-205ENST00000600841 MRPL50Q8N5N7 158 aaKnown RBP21.35■■□□□ 1.01
NOTCH3-205ENST00000600841 CLEC11AQ9Y240 323 aa21.35■■□□□ 1.01
NOTCH3-205ENST00000600841 TRMT2AQ8IZ69 625 aaKnown RBP21.34■■□□□ 1.01
NOTCH3-205ENST00000600841 MIER1Q8N108 512 aa21.34■■□□□ 1.01
NOTCH3-205ENST00000600841 GPR101Q96P66 508 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms