RNA–Protein interactions for RNA: ENST00000600818.1

SUPT5H-218, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-218ENST00000600818 RTL5Q5HYW3 569 aaPredicted RBP17.28■□□□□ 0.36
SUPT5H-218ENST00000600818 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
SUPT5H-218ENST00000600818 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
SUPT5H-218ENST00000600818 SSH1Q8WYL5 1049 aa17.28■□□□□ 0.36
SUPT5H-218ENST00000600818 PSMD1Q99460 953 aa17.28■□□□□ 0.36
SUPT5H-218ENST00000600818 COL4A1P02462 1669 aa17.28■□□□□ 0.36
SUPT5H-218ENST00000600818 CASP7P55210 303 aa17.27■□□□□ 0.36
SUPT5H-218ENST00000600818 BEND3Q5T5X7 828 aa17.27■□□□□ 0.36
SUPT5H-218ENST00000600818 PTPRCP08575 1304 aa17.26■□□□□ 0.35
SUPT5H-218ENST00000600818 F6X3S4 739 aa17.26■□□□□ 0.35
SUPT5H-218ENST00000600818 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
SUPT5H-218ENST00000600818 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
SUPT5H-218ENST00000600818 SP8Q8IXZ3 490 aa17.26■□□□□ 0.35
SUPT5H-218ENST00000600818 PLA2G12BQ9BX93 195 aa17.26■□□□□ 0.35
SUPT5H-218ENST00000600818 GPBP1L1Q9HC44 474 aaPredicted RBP17.26■□□□□ 0.35
SUPT5H-218ENST00000600818 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
SUPT5H-218ENST00000600818 RTL9Q8NET4 1388 aa17.25■□□□□ 0.35
SUPT5H-218ENST00000600818 ZBED9Q6R2W3 1325 aa17.24■□□□□ 0.35
SUPT5H-218ENST00000600818 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
SUPT5H-218ENST00000600818 JARID2Q92833 1246 aaPredicted RBP17.24■□□□□ 0.35
SUPT5H-218ENST00000600818 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
SUPT5H-218ENST00000600818 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
SUPT5H-218ENST00000600818 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
SUPT5H-218ENST00000600818 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
SUPT5H-218ENST00000600818 CTSWP56202 376 aa17.23■□□□□ 0.35
SUPT5H-218ENST00000600818 UBE3BQ7Z3V4 1068 aa17.23■□□□□ 0.35
SUPT5H-218ENST00000600818 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
SUPT5H-218ENST00000600818 WDR90Q96KV7 1748 aa17.23■□□□□ 0.35
SUPT5H-218ENST00000600818 GLTPD2A6NH11 291 aa17.22■□□□□ 0.35
SUPT5H-218ENST00000600818 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
SUPT5H-218ENST00000600818 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
SUPT5H-218ENST00000600818 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
SUPT5H-218ENST00000600818 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
SUPT5H-218ENST00000600818 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
SUPT5H-218ENST00000600818 COL4A5P29400 1685 aa17.22■□□□□ 0.35
SUPT5H-218ENST00000600818 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
SUPT5H-218ENST00000600818 KIF3CO14782 793 aa17.21■□□□□ 0.35
SUPT5H-218ENST00000600818 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
SUPT5H-218ENST00000600818 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
SUPT5H-218ENST00000600818 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
SUPT5H-218ENST00000600818 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
SUPT5H-218ENST00000600818 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
SUPT5H-218ENST00000600818 CSF1RP07333 972 aa17.2■□□□□ 0.34
SUPT5H-218ENST00000600818 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
SUPT5H-218ENST00000600818 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
SUPT5H-218ENST00000600818 UTYO14607 1347 aa17.2■□□□□ 0.34
SUPT5H-218ENST00000600818 GRM8O00222 908 aa17.19■□□□□ 0.34
SUPT5H-218ENST00000600818 MPNDQ8N594 471 aa17.19■□□□□ 0.34
SUPT5H-218ENST00000600818 SUPT20HQ8NEM7 779 aa17.19■□□□□ 0.34
SUPT5H-218ENST00000600818 FZD9O00144 591 aa17.18■□□□□ 0.34
SUPT5H-218ENST00000600818 DPY19L2Q6NUT2 758 aa17.18■□□□□ 0.34
SUPT5H-218ENST00000600818 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
SUPT5H-218ENST00000600818 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
SUPT5H-218ENST00000600818 GREM2Q9H772 168 aa17.18■□□□□ 0.34
SUPT5H-218ENST00000600818 NMRK2Q9NPI5 230 aa17.18■□□□□ 0.34
SUPT5H-218ENST00000600818 SPEF2Q9C093 1822 aa17.18■□□□□ 0.34
SUPT5H-218ENST00000600818 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
SUPT5H-218ENST00000600818 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
SUPT5H-218ENST00000600818 SCN4AP35499 1836 aa17.17■□□□□ 0.34
SUPT5H-218ENST00000600818 FOXO4P98177 505 aa17.16■□□□□ 0.34
SUPT5H-218ENST00000600818 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
SUPT5H-218ENST00000600818 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
SUPT5H-218ENST00000600818 ARHGAP45Q92619 1136 aa17.16■□□□□ 0.34
SUPT5H-218ENST00000600818 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
SUPT5H-218ENST00000600818 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
SUPT5H-218ENST00000600818 KIF16BQ96L93 1317 aa17.16■□□□□ 0.34
SUPT5H-218ENST00000600818 GPSM2P81274 684 aa17.15■□□□□ 0.34
SUPT5H-218ENST00000600818 LARGE2Q8N3Y3 721 aa17.15■□□□□ 0.34
SUPT5H-218ENST00000600818 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
SUPT5H-218ENST00000600818 BSDC1Q9NW68 430 aaPredicted RBP17.15■□□□□ 0.34
SUPT5H-218ENST00000600818 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
SUPT5H-218ENST00000600818 POTECB2RU33 542 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 PPIP5K2O43314 1243 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 ITGA6P23229 1130 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 C1QTNF8P60827 252 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 AOC3Q16853 763 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 L3MBTL3Q96JM7 780 aaPredicted RBP17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
SUPT5H-218ENST00000600818 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
SUPT5H-218ENST00000600818 DDNO94850 711 aaPredicted RBP17.13■□□□□ 0.33
SUPT5H-218ENST00000600818 NBPF7P0C2Y1 421 aaPredicted RBP17.13■□□□□ 0.33
SUPT5H-218ENST00000600818 EPHA10Q5JZY3 1008 aa17.13■□□□□ 0.33
SUPT5H-218ENST00000600818 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
SUPT5H-218ENST00000600818 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
SUPT5H-218ENST00000600818 TOMM70O94826 608 aa17.12■□□□□ 0.33
SUPT5H-218ENST00000600818 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
SUPT5H-218ENST00000600818 CCT4P50991 539 aaKnown RBP17.12■□□□□ 0.33
SUPT5H-218ENST00000600818 NIM1KQ8IY84 436 aa17.12■□□□□ 0.33
SUPT5H-218ENST00000600818 GPC2Q8N158 579 aa17.12■□□□□ 0.33
SUPT5H-218ENST00000600818 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
SUPT5H-218ENST00000600818 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
SUPT5H-218ENST00000600818 RABL6Q3YEC7 729 aaPredicted RBP17.11■□□□□ 0.33
SUPT5H-218ENST00000600818 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
SUPT5H-218ENST00000600818 SUCLG2Q96I99 432 aa17.11■□□□□ 0.33
SUPT5H-218ENST00000600818 MINPP1Q9UNW1 487 aa17.11■□□□□ 0.33
SUPT5H-218ENST00000600818 XDHP47989 1333 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 896.2 ms