RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 USP44Q9H0E7 712 aa26.07■■□□□ 1.76
GTPBP3-221ENST00000600610 SYNE4Q8N205 404 aa26.06■■□□□ 1.76
GTPBP3-221ENST00000600610 RBM17Q96I25 401 aaKnown RBP26.06■■□□□ 1.76
GTPBP3-221ENST00000600610 CHMP4BQ9H444 224 aaKnown RBP26.06■■□□□ 1.76
GTPBP3-221ENST00000600610 GNAI3P08754 354 aa26.05■■□□□ 1.76
GTPBP3-221ENST00000600610 CCDC152Q4G0S7 254 aa26.05■■□□□ 1.76
GTPBP3-221ENST00000600610 RTL5Q5HYW3 569 aaPredicted RBP26.04■■□□□ 1.76
GTPBP3-221ENST00000600610 CLUAP1Q96AJ1 413 aa26.04■■□□□ 1.76
GTPBP3-221ENST00000600610 RTL9Q8NET4 1388 aa26.04■■□□□ 1.76
GTPBP3-221ENST00000600610 CACNA1SQ13698 1873 aa26.03■■□□□ 1.76
GTPBP3-221ENST00000600610 CSF1RP07333 972 aa26.02■■□□□ 1.76
GTPBP3-221ENST00000600610 NBPF7P0C2Y1 421 aaPredicted RBP26.02■■□□□ 1.76
GTPBP3-221ENST00000600610 CTSWP56202 376 aa26.02■■□□□ 1.76
GTPBP3-221ENST00000600610 DDX46Q7L014 1031 aaKnown RBP26.02■■□□□ 1.76
GTPBP3-221ENST00000600610 TMC4Q7Z404 712 aa26.02■■□□□ 1.76
GTPBP3-221ENST00000600610 TMEM57Q8N5G2 664 aa26.02■■□□□ 1.76
GTPBP3-221ENST00000600610 SLX4Q8IY92 1834 aa26.02■■□□□ 1.76
GTPBP3-221ENST00000600610 TTLL11Q8NHH1 800 aa26.01■■□□□ 1.75
GTPBP3-221ENST00000600610 BBOX1O75936 387 aa26■■□□□ 1.75
GTPBP3-221ENST00000600610 UBTFL1P0CB47 393 aaPredicted RBP26■■□□□ 1.75
GTPBP3-221ENST00000600610 GRIPAP1Q4V328 841 aa26■■□□□ 1.75
GTPBP3-221ENST00000600610 SOGA3Q5TF21 947 aa26■■□□□ 1.75
GTPBP3-221ENST00000600610 PRPF40BQ6NWY9 871 aaKnown RBP25.99■■□□□ 1.75
GTPBP3-221ENST00000600610 C3orf67Q6ZVT6 689 aa25.99■■□□□ 1.75
GTPBP3-221ENST00000600610 DDX19BQ9UMR2 479 aa25.99■■□□□ 1.75
GTPBP3-221ENST00000600610 SBF1O95248 1867 aa25.99■■□□□ 1.75
GTPBP3-221ENST00000600610 RRP1P56182 461 aaKnown RBP25.98■■□□□ 1.75
GTPBP3-221ENST00000600610 FOXO4P98177 505 aa25.98■■□□□ 1.75
GTPBP3-221ENST00000600610 RABL6Q3YEC7 729 aaPredicted RBP25.98■■□□□ 1.75
GTPBP3-221ENST00000600610 CC2D2BQ6DHV5 1058 aa25.98■■□□□ 1.75
GTPBP3-221ENST00000600610 JARID2Q92833 1246 aaPredicted RBP25.98■■□□□ 1.75
GTPBP3-221ENST00000600610 TNNQ9UQP3 1299 aa25.98■■□□□ 1.75
GTPBP3-221ENST00000600610 RLBP1P12271 317 aa25.97■■□□□ 1.75
GTPBP3-221ENST00000600610 GRAPQ13588 217 aa25.97■■□□□ 1.75
GTPBP3-221ENST00000600610 MVPQ14764 893 aaKnown RBP25.97■■□□□ 1.75
GTPBP3-221ENST00000600610 ITPRIPQ8IWB1 547 aa25.97■■□□□ 1.75
GTPBP3-221ENST00000600610 GRAPLQ8TC17 118 aaPredicted RBP25.97■■□□□ 1.75
GTPBP3-221ENST00000600610 FER1L6Q2WGJ9 1857 aa25.96■■□□□ 1.75
GTPBP3-221ENST00000600610 C21orf2O43822 256 aa25.96■■□□□ 1.75
GTPBP3-221ENST00000600610 ZNF784Q8NCA9 323 aaPredicted RBP25.96■■□□□ 1.75
GTPBP3-221ENST00000600610 CDC5LQ99459 802 aaKnown RBP25.96■■□□□ 1.75
GTPBP3-221ENST00000600610 TAF1P21675 1872 aa25.96■■□□□ 1.75
GTPBP3-221ENST00000600610 ZBTB7BO15156 539 aaPredicted RBP25.95■■□□□ 1.74
GTPBP3-221ENST00000600610 PLIN1O60240 522 aa25.95■■□□□ 1.74
GTPBP3-221ENST00000600610 PANK1Q8TE04 598 aa25.95■■□□□ 1.74
GTPBP3-221ENST00000600610 C7orf43Q8WVR3 580 aa25.95■■□□□ 1.74
GTPBP3-221ENST00000600610 SUCLG2Q96I99 432 aa25.95■■□□□ 1.74
GTPBP3-221ENST00000600610 KAZALD1Q96I82 304 aa25.94■■□□□ 1.74
GTPBP3-221ENST00000600610 MEIS3Q99687 375 aa25.94■■□□□ 1.74
GTPBP3-221ENST00000600610 TMX4Q9H1E5 349 aaPredicted RBP25.94■■□□□ 1.74
GTPBP3-221ENST00000600610 GNAI2P04899 355 aa25.93■■□□□ 1.74
GTPBP3-221ENST00000600610 RPS8P62241 208 aaKnown RBP25.93■■□□□ 1.74
GTPBP3-221ENST00000600610 LMBR1LQ6UX01 489 aa25.93■■□□□ 1.74
GTPBP3-221ENST00000600610 CCDC88AQ3V6T2 1871 aa25.93■■□□□ 1.74
GTPBP3-221ENST00000600610 IFIT5Q13325 482 aaKnown RBP25.92■■□□□ 1.74
GTPBP3-221ENST00000600610 BICC1Q9H694 974 aaKnown RBP25.92■■□□□ 1.74
GTPBP3-221ENST00000600610 LTBP3Q9NS15 1303 aa25.91■■□□□ 1.74
GTPBP3-221ENST00000600610 ANKRD18BA2A2Z9 1011 aa25.91■■□□□ 1.74
GTPBP3-221ENST00000600610 CCDC57Q2TAC2 916 aa25.91■■□□□ 1.74
GTPBP3-221ENST00000600610 C9orf131Q5VYM1 1079 aa25.91■■□□□ 1.74
GTPBP3-221ENST00000600610 SP8Q8IXZ3 490 aa25.91■■□□□ 1.74
GTPBP3-221ENST00000600610 GREM2Q9H772 168 aa25.91■■□□□ 1.74
GTPBP3-221ENST00000600610 ZNF219Q9P2Y4 722 aaPredicted RBP25.91■■□□□ 1.74
GTPBP3-221ENST00000600610 NFKBIEO00221 500 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 LMNB1P20700 586 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 ITGA6P23229 1130 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 CCDC93Q567U6 631 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 EPHA10Q5JZY3 1008 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 ANKRD18AQ8IVF6 992 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 ATP6V0A2Q9Y487 856 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 LRRC37AA6NMS7 1700 aa25.9■■□□□ 1.74
GTPBP3-221ENST00000600610 PPEF1O14829 653 aaPredicted RBP25.89■■□□□ 1.74
GTPBP3-221ENST00000600610 MTX1Q13505 466 aa25.89■■□□□ 1.74
GTPBP3-221ENST00000600610 RTKN2Q8IZC4 609 aa25.89■■□□□ 1.74
GTPBP3-221ENST00000600610 ANKRD44Q8N8A2 993 aa25.89■■□□□ 1.74
GTPBP3-221ENST00000600610 COG6Q9Y2V7 657 aa25.89■■□□□ 1.74
GTPBP3-221ENST00000600610 IGHMBP2P38935 993 aaKnown RBP25.88■■□□□ 1.73
GTPBP3-221ENST00000600610 RASSF7Q02833 373 aa25.88■■□□□ 1.73
GTPBP3-221ENST00000600610 AAMPQ13685 434 aa25.88■■□□□ 1.73
GTPBP3-221ENST00000600610 BSDC1Q9NW68 430 aaPredicted RBP25.88■■□□□ 1.73
GTPBP3-221ENST00000600610 RNF181Q9P0P0 153 aa25.88■■□□□ 1.73
GTPBP3-221ENST00000600610 LRRFIP2Q9Y608 721 aaKnown RBP25.88■■□□□ 1.73
GTPBP3-221ENST00000600610 DICER1Q9UPY3 1922 aaKnown RBP25.88■■□□□ 1.73
GTPBP3-221ENST00000600610 FAM161AQ3B820 660 aa25.87■■□□□ 1.73
GTPBP3-221ENST00000600610 CELF1Q92879 486 aaKnown RBP25.87■■□□□ 1.73
GTPBP3-221ENST00000600610 TAOK3Q9H2K8 898 aa25.87■■□□□ 1.73
GTPBP3-221ENST00000600610 SEC31BQ9NQW1 1179 aa25.87■■□□□ 1.73
GTPBP3-221ENST00000600610 ZC3H4Q9UPT8 1303 aaKnown RBP25.87■■□□□ 1.73
GTPBP3-221ENST00000600610 SPEF2Q9C093 1822 aa25.86■■□□□ 1.73
GTPBP3-221ENST00000600610 CENPBP07199 599 aaPredicted RBP25.86■■□□□ 1.73
GTPBP3-221ENST00000600610 FBXO3Q9UK99 471 aa25.86■■□□□ 1.73
GTPBP3-221ENST00000600610 CHMP3Q9Y3E7 222 aa25.86■■□□□ 1.73
GTPBP3-221ENST00000600610 C20orf194Q5TEA3 1177 aa25.85■■□□□ 1.73
GTPBP3-221ENST00000600610 MPHOSPH8Q99549 860 aa25.85■■□□□ 1.73
GTPBP3-221ENST00000600610 ZBTB40Q9NUA8 1239 aa25.85■■□□□ 1.73
GTPBP3-221ENST00000600610 SUPT16HQ9Y5B9 1047 aaKnown RBP25.85■■□□□ 1.73
GTPBP3-221ENST00000600610 CCDC85AQ96PX6 553 aaPredicted RBP25.84■■□□□ 1.73
GTPBP3-221ENST00000600610 PRELPP51888 382 aa25.83■■□□□ 1.73
GTPBP3-221ENST00000600610 FKBP4Q02790 459 aaKnown RBP eCLIP25.83■■□□□ 1.73
GTPBP3-221ENST00000600610 PSMD1Q99460 953 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms