RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 GNPATO15228 680 aa24.46■■□□□ 1.51
PNKP-214ENST00000600573 ZPR1O75312 459 aa24.46■■□□□ 1.51
PNKP-214ENST00000600573 CNTROBQ8N137 903 aa24.46■■□□□ 1.51
PNKP-214ENST00000600573 ANKRD18BA2A2Z9 1011 aa24.46■■□□□ 1.51
PNKP-214ENST00000600573 TRIM6-TRIM34B2RNG4 842 aa24.46■■□□□ 1.51
PNKP-214ENST00000600573 TNNI3KQ59H18 835 aa24.46■■□□□ 1.51
PNKP-214ENST00000600573 FPGT-TNNI3KV9GXZ4 949 aa24.46■■□□□ 1.51
PNKP-214ENST00000600573 BRWD3Q6RI45 1802 aa24.45■■□□□ 1.51
PNKP-214ENST00000600573 TAF7LQ5H9L4 462 aa24.45■■□□□ 1.5
PNKP-214ENST00000600573 ATG9AQ7Z3C6 839 aa24.45■■□□□ 1.5
PNKP-214ENST00000600573 TFCP2Q12800 502 aa24.44■■□□□ 1.5
PNKP-214ENST00000600573 TRAPPC3LQ5T215 181 aa24.44■■□□□ 1.5
PNKP-214ENST00000600573 REC8O95072 547 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 KCNQ4P56696 695 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 RILPL2Q969X0 211 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 NYXQ9GZU5 481 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 AKAP2Q9Y2D5 859 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 TRIM37O94972 964 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 NTSR2O95665 410 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 CEP126Q9P2H0 1117 aa24.43■■□□□ 1.5
PNKP-214ENST00000600573 BCORQ6W2J9 1755 aa24.42■■□□□ 1.5
PNKP-214ENST00000600573 TSHZ3Q63HK5 1081 aa24.42■■□□□ 1.5
PNKP-214ENST00000600573 CCDC8Q9H0W5 538 aaPredicted RBP24.42■■□□□ 1.5
PNKP-214ENST00000600573 PLSCR1O15162 318 aa24.41■■□□□ 1.5
PNKP-214ENST00000600573 EPB41L2O43491 1005 aaKnown RBP24.41■■□□□ 1.5
PNKP-214ENST00000600573 ITGA6P23229 1130 aa24.41■■□□□ 1.5
PNKP-214ENST00000600573 SLC4A3P48751 1232 aa24.41■■□□□ 1.5
PNKP-214ENST00000600573 RTL9Q8NET4 1388 aa24.4■■□□□ 1.5
PNKP-214ENST00000600573 ARHGEF1Q92888 912 aaKnown RBP24.4■■□□□ 1.5
PNKP-214ENST00000600573 EVI5LQ96CN4 794 aa24.4■■□□□ 1.5
PNKP-214ENST00000600573 ATP5JP18859 108 aa24.39■■□□□ 1.5
PNKP-214ENST00000600573 RFC4P35249 363 aa24.39■■□□□ 1.5
PNKP-214ENST00000600573 CCDC152Q4G0S7 254 aa24.39■■□□□ 1.5
PNKP-214ENST00000600573 USPL1Q5W0Q7 1092 aa24.39■■□□□ 1.5
PNKP-214ENST00000600573 TICAM2Q86XR7 235 aa24.39■■□□□ 1.5
PNKP-214ENST00000600573 SYNE4Q8N205 404 aa24.39■■□□□ 1.5
PNKP-214ENST00000600573 SETDB2Q96T68 719 aa24.39■■□□□ 1.5
PNKP-214ENST00000600573 C4BP0C0L5 1744 aa24.39■■□□□ 1.49
PNKP-214ENST00000600573 CHMLP26374 656 aa24.39■■□□□ 1.49
PNKP-214ENST00000600573 SLC10A5Q5PT55 438 aa24.39■■□□□ 1.49
PNKP-214ENST00000600573 GREM2Q9H772 168 aa24.39■■□□□ 1.49
PNKP-214ENST00000600573 LRRC4BQ9NT99 713 aa24.39■■□□□ 1.49
PNKP-214ENST00000600573 HIP1O00291 1037 aa24.38■■□□□ 1.49
PNKP-214ENST00000600573 ZNF594Q96JF6 807 aaPredicted RBP24.38■■□□□ 1.49
PNKP-214ENST00000600573 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
PNKP-214ENST00000600573 TAF1LQ8IZX4 1826 aa24.38■■□□□ 1.49
PNKP-214ENST00000600573 LRRC24Q50LG9 513 aa24.37■■□□□ 1.49
PNKP-214ENST00000600573 LDHAL6AQ6ZMR3 332 aa24.37■■□□□ 1.49
PNKP-214ENST00000600573 SSFA2P28290 1259 aa24.36■■□□□ 1.49
PNKP-214ENST00000600573 RIPOR2Q9Y4F9 1068 aa24.36■■□□□ 1.49
PNKP-214ENST00000600573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.36■■□□□ 1.49
PNKP-214ENST00000600573 SCN7AQ01118 1682 aa24.36■■□□□ 1.49
PNKP-214ENST00000600573 TPTE2Q6XPS3 522 aa24.35■■□□□ 1.49
PNKP-214ENST00000600573 ESYT1Q9BSJ8 1104 aa24.35■■□□□ 1.49
PNKP-214ENST00000600573 TBC1D2Q9BYX2 928 aa24.35■■□□□ 1.49
PNKP-214ENST00000600573 DBNLQ9UJU6 430 aaKnown RBP24.35■■□□□ 1.49
PNKP-214ENST00000600573 TBC1D9BQ66K14 1250 aa24.35■■□□□ 1.49
PNKP-214ENST00000600573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.35■■□□□ 1.49
PNKP-214ENST00000600573 RUFY2Q8WXA3 655 aa24.35■■□□□ 1.49
PNKP-214ENST00000600573 HCLS1P14317 486 aaPredicted RBP24.34■■□□□ 1.49
PNKP-214ENST00000600573 GTF2E1P29083 439 aaPredicted RBP24.34■■□□□ 1.49
PNKP-214ENST00000600573 SF3B3Q15393 1217 aaKnown RBP24.34■■□□□ 1.49
PNKP-214ENST00000600573 TXNRD1Q16881 649 aa24.34■■□□□ 1.49
PNKP-214ENST00000600573 USP26Q9BXU7 913 aa24.34■■□□□ 1.49
PNKP-214ENST00000600573 PUS3Q9BZE2 481 aaKnown RBP24.34■■□□□ 1.49
PNKP-214ENST00000600573 CNNM1Q9NRU3 951 aa24.34■■□□□ 1.49
PNKP-214ENST00000600573 MROH5Q6ZUA9 1318 aa24.33■■□□□ 1.49
PNKP-214ENST00000600573 FAM177BA6PVY3 158 aa24.33■■□□□ 1.49
PNKP-214ENST00000600573 CCDC85AQ96PX6 553 aaPredicted RBP24.33■■□□□ 1.49
PNKP-214ENST00000600573 TLR7Q9NYK1 1049 aaKnown RBP24.33■■□□□ 1.49
PNKP-214ENST00000600573 MYH3P11055 1940 aa24.33■■□□□ 1.48
PNKP-214ENST00000600573 HSCBQ8IWL3 235 aa24.32■■□□□ 1.48
PNKP-214ENST00000600573 NEUROD6Q96NK8 337 aa24.32■■□□□ 1.48
PNKP-214ENST00000600573 A0A1B0GUL7 405 aa24.32■■□□□ 1.48
PNKP-214ENST00000600573 METTL24Q5JXM2 366 aa24.32■■□□□ 1.48
PNKP-214ENST00000600573 SNX21Q969T3 373 aa24.32■■□□□ 1.48
PNKP-214ENST00000600573 CDC5LQ99459 802 aaKnown RBP24.32■■□□□ 1.48
PNKP-214ENST00000600573 DBNDD2Q9BQY9 259 aa24.32■■□□□ 1.48
PNKP-214ENST00000600573 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
PNKP-214ENST00000600573 ZNF609O15014 1411 aa24.31■■□□□ 1.48
PNKP-214ENST00000600573 IGHMBP2P38935 993 aaKnown RBP24.31■■□□□ 1.48
PNKP-214ENST00000600573 NBPF5PQ86XG9 351 aaPredicted RBP24.31■■□□□ 1.48
PNKP-214ENST00000600573 IL27Q8NEV9 243 aa24.31■■□□□ 1.48
PNKP-214ENST00000600573 MPHOSPH8Q99549 860 aa24.31■■□□□ 1.48
PNKP-214ENST00000600573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.3■■□□□ 1.48
PNKP-214ENST00000600573 APBA3O96018 575 aa24.3■■□□□ 1.48
PNKP-214ENST00000600573 ERFEQ4G0M1 354 aa24.3■■□□□ 1.48
PNKP-214ENST00000600573 CCDC158Q5M9N0 1113 aa24.3■■□□□ 1.48
PNKP-214ENST00000600573 KIF2CQ99661 725 aa24.3■■□□□ 1.48
PNKP-214ENST00000600573 HAUS7Q99871 368 aa24.3■■□□□ 1.48
PNKP-214ENST00000600573 BOLA2Q9H3K6 86 aa24.3■■□□□ 1.48
PNKP-214ENST00000600573 RFX7Q2KHR2 1363 aa24.29■■□□□ 1.48
PNKP-214ENST00000600573 TIMM10P62072 90 aa24.29■■□□□ 1.48
PNKP-214ENST00000600573 NLRP3Q96P20 1036 aa24.29■■□□□ 1.48
PNKP-214ENST00000600573 DIAPH3Q9NSV4 1193 aa24.29■■□□□ 1.48
PNKP-214ENST00000600573 ABCC12Q96J65 1359 aa24.29■■□□□ 1.48
PNKP-214ENST00000600573 LAMB2P55268 1798 aa24.29■■□□□ 1.48
PNKP-214ENST00000600573 PDE8BO95263 885 aa24.28■■□□□ 1.48
PNKP-214ENST00000600573 MAP4K4O95819 1239 aaPredicted RBP24.28■■□□□ 1.48
PNKP-214ENST00000600573 MCCP23508 829 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms