RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
HIF3A-218ENST00000600383 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
HIF3A-218ENST00000600383 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
HIF3A-218ENST00000600383 CNTNAP4Q9C0A0 1308 aa18.45■□□□□ 0.54
HIF3A-218ENST00000600383 KRT27Q7Z3Y8 459 aa18.45■□□□□ 0.54
HIF3A-218ENST00000600383 CEP126Q9P2H0 1117 aa18.45■□□□□ 0.54
HIF3A-218ENST00000600383 EP400Q96L91 3159 aa18.45■□□□□ 0.54
HIF3A-218ENST00000600383 ANKRD18BA2A2Z9 1011 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 CIAO1O76071 339 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 PARP10Q53GL7 1025 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 BCL11BQ9C0K0 894 aaPredicted RBP18.44■□□□□ 0.54
HIF3A-218ENST00000600383 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 ANKRD36CQ5JPF3 1778 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 LDHAL6AQ6ZMR3 332 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 IL25Q9H293 177 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 DIAPH3Q9NSV4 1193 aa18.44■□□□□ 0.54
HIF3A-218ENST00000600383 RPS6KA4O75676 772 aa18.43■□□□□ 0.54
HIF3A-218ENST00000600383 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
HIF3A-218ENST00000600383 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
HIF3A-218ENST00000600383 NDUFB9Q9Y6M9 179 aa18.43■□□□□ 0.54
HIF3A-218ENST00000600383 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
HIF3A-218ENST00000600383 COL5A3P25940 1745 aaPredicted RBP18.43■□□□□ 0.54
HIF3A-218ENST00000600383 TRIM37O94972 964 aa18.43■□□□□ 0.54
HIF3A-218ENST00000600383 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
HIF3A-218ENST00000600383 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
HIF3A-218ENST00000600383 USPL1Q5W0Q7 1092 aa18.42■□□□□ 0.54
HIF3A-218ENST00000600383 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
HIF3A-218ENST00000600383 CNNM1Q9NRU3 951 aa18.42■□□□□ 0.54
HIF3A-218ENST00000600383 SRP68Q9UHB9 627 aaKnown RBP18.42■□□□□ 0.54
HIF3A-218ENST00000600383 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
HIF3A-218ENST00000600383 A0A1B0GUL7 405 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 ZPR1O75312 459 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 PHF14O94880 888 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 ATP5JP18859 108 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 HSCBQ8IWL3 235 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 DNAJC2Q99543 621 aaKnown RBP18.41■□□□□ 0.54
HIF3A-218ENST00000600383 CICQ96RK0 1608 aaPredicted RBP18.41■□□□□ 0.54
HIF3A-218ENST00000600383 RREB1Q92766 1687 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
HIF3A-218ENST00000600383 NTSR2O95665 410 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 SLKQ9H2G2 1235 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-218ENST00000600383 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 SGSM2O43147 1006 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-218ENST00000600383 METTL24Q5JXM2 366 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
HIF3A-218ENST00000600383 ARHGEF1Q92888 912 aaKnown RBP18.4■□□□□ 0.54
HIF3A-218ENST00000600383 LRRC4BQ9NT99 713 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 NARFQ9UHQ1 456 aa18.4■□□□□ 0.54
HIF3A-218ENST00000600383 GORABQ5T7V8 394 aa18.39■□□□□ 0.53
HIF3A-218ENST00000600383 AK7Q96M32 723 aa18.39■□□□□ 0.53
HIF3A-218ENST00000600383 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
HIF3A-218ENST00000600383 RIPOR2Q9Y4F9 1068 aa18.39■□□□□ 0.53
HIF3A-218ENST00000600383 SBF2Q86WG5 1849 aa18.39■□□□□ 0.53
HIF3A-218ENST00000600383 ZNF831Q5JPB2 1677 aa18.39■□□□□ 0.53
HIF3A-218ENST00000600383 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
HIF3A-218ENST00000600383 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
HIF3A-218ENST00000600383 RUFY2Q8WXA3 655 aa18.38■□□□□ 0.53
HIF3A-218ENST00000600383 BCL2L12Q9HB09 334 aa18.38■□□□□ 0.53
HIF3A-218ENST00000600383 MCCP23508 829 aa18.38■□□□□ 0.53
HIF3A-218ENST00000600383 SEC31BQ9NQW1 1179 aa18.38■□□□□ 0.53
HIF3A-218ENST00000600383 CD2BP2O95400 341 aaKnown RBP18.37■□□□□ 0.53
HIF3A-218ENST00000600383 RFC4P35249 363 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 ERFEQ4G0M1 354 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 SETDB2Q96T68 719 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 HSP90B1P14625 803 aaKnown RBP18.37■□□□□ 0.53
HIF3A-218ENST00000600383 RABEP1Q15276 862 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 SNX21Q969T3 373 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
HIF3A-218ENST00000600383 ADORA1P30542 326 aa18.36■□□□□ 0.53
HIF3A-218ENST00000600383 NBR1Q14596 966 aa18.36■□□□□ 0.53
HIF3A-218ENST00000600383 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
HIF3A-218ENST00000600383 HELBQ8NG08 1087 aaPredicted RBP18.36■□□□□ 0.53
HIF3A-218ENST00000600383 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
HIF3A-218ENST00000600383 HAUS7Q99871 368 aa18.36■□□□□ 0.53
HIF3A-218ENST00000600383 MYH3P11055 1940 aa18.36■□□□□ 0.53
HIF3A-218ENST00000600383 NMIQ13287 307 aaPredicted RBP18.35■□□□□ 0.53
HIF3A-218ENST00000600383 CCDC158Q5M9N0 1113 aa18.35■□□□□ 0.53
HIF3A-218ENST00000600383 HIP1O00291 1037 aa18.35■□□□□ 0.53
HIF3A-218ENST00000600383 IFIT1P09914 478 aaKnown RBP18.35■□□□□ 0.53
HIF3A-218ENST00000600383 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
HIF3A-218ENST00000600383 ZNF609O15014 1411 aa18.34■□□□□ 0.53
HIF3A-218ENST00000600383 BRWD3Q6RI45 1802 aa18.34■□□□□ 0.53
HIF3A-218ENST00000600383 GOLIM4O00461 696 aa18.34■□□□□ 0.53
HIF3A-218ENST00000600383 ATP2B3Q16720 1220 aa18.34■□□□□ 0.53
HIF3A-218ENST00000600383 FKBP4Q02790 459 aaKnown RBP eCLIP18.34■□□□□ 0.53
HIF3A-218ENST00000600383 TTC39AQ5SRH9 613 aa18.34■□□□□ 0.53
HIF3A-218ENST00000600383 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
HIF3A-218ENST00000600383 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
HIF3A-218ENST00000600383 LSG1Q9H089 658 aaKnown RBP18.34■□□□□ 0.53
HIF3A-218ENST00000600383 NPHP1O15259 732 aa18.33■□□□□ 0.52
HIF3A-218ENST00000600383 PAG1Q9NWQ8 432 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms