RNA–Protein interactions for RNA: ENST00000600341.5

USF2-213, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 1,392 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-213ENST00000600341 ZKSCAN2Q63HK3 967 aa22.76■■□□□ 1.23
USF2-213ENST00000600341 C7orf43Q8WVR3 580 aa22.76■■□□□ 1.23
USF2-213ENST00000600341 PLA2G12BQ9BX93 195 aa22.76■■□□□ 1.23
USF2-213ENST00000600341 C9orf78Q9NZ63 289 aaPredicted RBP22.76■■□□□ 1.23
USF2-213ENST00000600341 TAF1P21675 1872 aa22.76■■□□□ 1.23
USF2-213ENST00000600341 HSP90B1P14625 803 aaKnown RBP22.76■■□□□ 1.23
USF2-213ENST00000600341 CCT4P50991 539 aaKnown RBP22.76■■□□□ 1.23
USF2-213ENST00000600341 SEC31BQ9NQW1 1179 aa22.76■■□□□ 1.23
USF2-213ENST00000600341 UTYO14607 1347 aa22.75■■□□□ 1.23
USF2-213ENST00000600341 UTRNP46939 3433 aa22.75■■□□□ 1.23
USF2-213ENST00000600341 EPHA10Q5JZY3 1008 aa22.75■■□□□ 1.23
USF2-213ENST00000600341 ARHGAP27Q6ZUM4 889 aa22.75■■□□□ 1.23
USF2-213ENST00000600341 DDX46Q7L014 1031 aaKnown RBP22.75■■□□□ 1.23
USF2-213ENST00000600341 TTLL11Q8NHH1 800 aa22.75■■□□□ 1.23
USF2-213ENST00000600341 SUCLG2Q96I99 432 aa22.75■■□□□ 1.23
USF2-213ENST00000600341 USP44Q9H0E7 712 aa22.75■■□□□ 1.23
USF2-213ENST00000600341 FOXO4P98177 505 aa22.74■■□□□ 1.23
USF2-213ENST00000600341 GRAPQ13588 217 aa22.74■■□□□ 1.23
USF2-213ENST00000600341 INTS3Q68E01 1043 aaKnown RBP22.74■■□□□ 1.23
USF2-213ENST00000600341 GRAPLQ8TC17 118 aaPredicted RBP22.74■■□□□ 1.23
USF2-213ENST00000600341 CELF1Q92879 486 aaKnown RBP22.74■■□□□ 1.23
USF2-213ENST00000600341 MYH3P11055 1940 aa22.73■■□□□ 1.23
USF2-213ENST00000600341 PPEF1O14829 653 aaPredicted RBP22.73■■□□□ 1.23
USF2-213ENST00000600341 CCDC152Q4G0S7 254 aa22.73■■□□□ 1.23
USF2-213ENST00000600341 KAZALD1Q96I82 304 aa22.73■■□□□ 1.23
USF2-213ENST00000600341 NFKBIEO00221 500 aa22.72■■□□□ 1.23
USF2-213ENST00000600341 RLBP1P12271 317 aa22.72■■□□□ 1.23
USF2-213ENST00000600341 RASSF7Q02833 373 aa22.72■■□□□ 1.23
USF2-213ENST00000600341 GREM2Q9H772 168 aa22.72■■□□□ 1.23
USF2-213ENST00000600341 SNED1Q8TER0 1413 aa22.72■■□□□ 1.23
USF2-213ENST00000600341 CSF1RP07333 972 aa22.71■■□□□ 1.23
USF2-213ENST00000600341 TMEM57Q8N5G2 664 aa22.71■■□□□ 1.23
USF2-213ENST00000600341 PLIN1O60240 522 aa22.7■■□□□ 1.22
USF2-213ENST00000600341 FAM161AQ3B820 660 aa22.7■■□□□ 1.22
USF2-213ENST00000600341 RTL9Q8NET4 1388 aa22.69■■□□□ 1.22
USF2-213ENST00000600341 PRELPP51888 382 aa22.69■■□□□ 1.22
USF2-213ENST00000600341 CCDC93Q567U6 631 aa22.69■■□□□ 1.22
USF2-213ENST00000600341 DZIP1LQ8IYY4 767 aaKnown RBP22.69■■□□□ 1.22
USF2-213ENST00000600341 MEIS3Q99687 375 aa22.69■■□□□ 1.22
USF2-213ENST00000600341 BBOX1O75936 387 aa22.68■■□□□ 1.22
USF2-213ENST00000600341 LMBR1LQ6UX01 489 aa22.68■■□□□ 1.22
USF2-213ENST00000600341 ATP6V0A2Q9Y487 856 aa22.68■■□□□ 1.22
USF2-213ENST00000600341 FER1L6Q2WGJ9 1857 aa22.68■■□□□ 1.22
USF2-213ENST00000600341 ANKRD44Q8N8A2 993 aa22.67■■□□□ 1.22
USF2-213ENST00000600341 PANK1Q8TE04 598 aa22.67■■□□□ 1.22
USF2-213ENST00000600341 BICC1Q9H694 974 aaKnown RBP22.67■■□□□ 1.22
USF2-213ENST00000600341 LRRC37AA6NMS7 1700 aa22.67■■□□□ 1.22
USF2-213ENST00000600341 ITGA6P23229 1130 aa22.66■■□□□ 1.22
USF2-213ENST00000600341 RPS8P62241 208 aaKnown RBP22.66■■□□□ 1.22
USF2-213ENST00000600341 SOGA3Q5TF21 947 aa22.66■■□□□ 1.22
USF2-213ENST00000600341 FTSJ3Q8IY81 847 aaKnown RBP22.66■■□□□ 1.22
USF2-213ENST00000600341 UBTFL1P0CB47 393 aaPredicted RBP22.65■■□□□ 1.22
USF2-213ENST00000600341 CHMP3Q9Y3E7 222 aa22.65■■□□□ 1.22
USF2-213ENST00000600341 RABL6Q3YEC7 729 aaPredicted RBP22.64■■□□□ 1.22
USF2-213ENST00000600341 SP8Q8IXZ3 490 aa22.64■■□□□ 1.22
USF2-213ENST00000600341 CC2D2BQ6DHV5 1058 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 ANKRD18AQ8IVF6 992 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 CDC5LQ99459 802 aaKnown RBP22.63■■□□□ 1.21
USF2-213ENST00000600341 TAOK3Q9H2K8 898 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 CHD4Q14839 1912 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 SPEF2Q9C093 1822 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 LTBP3Q9NS15 1303 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 FKBP4Q02790 459 aaKnown RBP eCLIP22.63■■□□□ 1.21
USF2-213ENST00000600341 TMC4Q7Z404 712 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 ITPRIPQ8IWB1 547 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 RTKN2Q8IZC4 609 aa22.63■■□□□ 1.21
USF2-213ENST00000600341 LRRFIP2Q9Y608 721 aaKnown RBP22.63■■□□□ 1.21
USF2-213ENST00000600341 SBF1O95248 1867 aa22.62■■□□□ 1.21
USF2-213ENST00000600341 C20orf194Q5TEA3 1177 aa22.62■■□□□ 1.21
USF2-213ENST00000600341 C9orf131Q5VYM1 1079 aa22.62■■□□□ 1.21
USF2-213ENST00000600341 DUOX1Q9NRD9 1551 aa22.61■■□□□ 1.21
USF2-213ENST00000600341 ANKRD18BA2A2Z9 1011 aa22.61■■□□□ 1.21
USF2-213ENST00000600341 IFIT5Q13325 482 aaKnown RBP22.61■■□□□ 1.21
USF2-213ENST00000600341 ZNF594Q96JF6 807 aaPredicted RBP22.61■■□□□ 1.21
USF2-213ENST00000600341 ZNF277Q9NRM2 450 aaPredicted RBP22.61■■□□□ 1.21
USF2-213ENST00000600341 RNF181Q9P0P0 153 aa22.61■■□□□ 1.21
USF2-213ENST00000600341 GNAI3P08754 354 aa22.6■■□□□ 1.21
USF2-213ENST00000600341 LMNB1P20700 586 aa22.6■■□□□ 1.21
USF2-213ENST00000600341 GPSM2P81274 684 aa22.6■■□□□ 1.21
USF2-213ENST00000600341 PSMD1Q99460 953 aa22.6■■□□□ 1.21
USF2-213ENST00000600341 LTBP1Q14766 1721 aa22.59■■□□□ 1.21
USF2-213ENST00000600341 MPNDQ8N594 471 aa22.59■■□□□ 1.21
USF2-213ENST00000600341 BSDC1Q9NW68 430 aaPredicted RBP22.59■■□□□ 1.21
USF2-213ENST00000600341 IGHMBP2P38935 993 aaKnown RBP22.58■■□□□ 1.21
USF2-213ENST00000600341 CCDC57Q2TAC2 916 aa22.58■■□□□ 1.21
USF2-213ENST00000600341 DPP8Q6V1X1 898 aaPredicted RBP22.58■■□□□ 1.21
USF2-213ENST00000600341 TMX4Q9H1E5 349 aaPredicted RBP22.58■■□□□ 1.21
USF2-213ENST00000600341 COG6Q9Y2V7 657 aa22.58■■□□□ 1.21
USF2-213ENST00000600341 ZBTB7BO15156 539 aaPredicted RBP22.57■■□□□ 1.2
USF2-213ENST00000600341 MS4A1P11836 297 aa22.57■■□□□ 1.2
USF2-213ENST00000600341 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.57■■□□□ 1.2
USF2-213ENST00000600341 RTFDC1Q9BY42 306 aaPredicted RBP22.57■■□□□ 1.2
USF2-213ENST00000600341 NSFL1CQ9UNZ2 370 aaKnown RBP22.57■■□□□ 1.2
USF2-213ENST00000600341 CCDC88AQ3V6T2 1871 aa22.57■■□□□ 1.2
USF2-213ENST00000600341 COL4A5P29400 1685 aa22.57■■□□□ 1.2
USF2-213ENST00000600341 YY1P25490 414 aa22.56■■□□□ 1.2
USF2-213ENST00000600341 RRP1P56182 461 aaKnown RBP22.56■■□□□ 1.2
USF2-213ENST00000600341 MVPQ14764 893 aaKnown RBP22.56■■□□□ 1.2
USF2-213ENST00000600341 GRIPAP1Q4V328 841 aa22.56■■□□□ 1.2
USF2-213ENST00000600341 MPHOSPH8Q99549 860 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms