RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 CXCL9Q07325 125 aa24.55■■□□□ 1.52
FARP1-229ENST00000600190 RTFDC1Q9BY42 306 aaPredicted RBP24.55■■□□□ 1.52
FARP1-229ENST00000600190 WDR33Q9C0J8 1336 aaKnown RBP24.55■■□□□ 1.52
FARP1-229ENST00000600190 HDGFL1Q5TGJ6 251 aa24.54■■□□□ 1.52
FARP1-229ENST00000600190 WBP1LQ9NX94 342 aa24.54■■□□□ 1.52
FARP1-229ENST00000600190 GPRC5DQ9NZD1 345 aa24.54■■□□□ 1.52
FARP1-229ENST00000600190 GRAPQ13588 217 aa24.53■■□□□ 1.52
FARP1-229ENST00000600190 GRAPLQ8TC17 118 aaPredicted RBP24.53■■□□□ 1.52
FARP1-229ENST00000600190 PRDM10Q9NQV6 1147 aa24.53■■□□□ 1.52
FARP1-229ENST00000600190 ADARB2Q9NS39 739 aaKnown RBP24.53■■□□□ 1.52
FARP1-229ENST00000600190 TRAF5O00463 557 aa24.52■■□□□ 1.52
FARP1-229ENST00000600190 ANKRD13DQ6ZTN6 518 aa24.52■■□□□ 1.52
FARP1-229ENST00000600190 PAXIP1Q6ZW49 1069 aaPredicted RBP24.52■■□□□ 1.52
FARP1-229ENST00000600190 ADAMTS8Q9UP79 889 aa24.52■■□□□ 1.52
FARP1-229ENST00000600190 GMPSP49915 693 aaPredicted RBP24.51■■□□□ 1.51
FARP1-229ENST00000600190 PLBD2Q8NHP8 589 aa24.51■■□□□ 1.51
FARP1-229ENST00000600190 TAF1P21675 1872 aa24.5■■□□□ 1.51
FARP1-229ENST00000600190 RAD17O75943 681 aa24.5■■□□□ 1.51
FARP1-229ENST00000600190 LBX1P52954 281 aa24.5■■□□□ 1.51
FARP1-229ENST00000600190 KIAA2012Q0VF49 1180 aa24.5■■□□□ 1.51
FARP1-229ENST00000600190 GRM1Q13255 1194 aa24.5■■□□□ 1.51
FARP1-229ENST00000600190 CIAPIN1Q6FI81 312 aa24.5■■□□□ 1.51
FARP1-229ENST00000600190 BCL2L13Q9BXK5 485 aa24.5■■□□□ 1.51
FARP1-229ENST00000600190 DBF4Q9UBU7 674 aaPredicted RBP24.5■■□□□ 1.51
FARP1-229ENST00000600190 ATP5J2-PTCD1G3V325 749 aa24.49■■□□□ 1.51
FARP1-229ENST00000600190 MAP2K1Q02750 393 aaPredicted RBP24.49■■□□□ 1.51
FARP1-229ENST00000600190 CST9Q5W186 159 aa24.49■■□□□ 1.51
FARP1-229ENST00000600190 FAM89AQ96GI7 184 aa24.49■■□□□ 1.51
FARP1-229ENST00000600190 HOXB7P09629 217 aa24.48■■□□□ 1.51
FARP1-229ENST00000600190 TNIP1Q15025 636 aa24.48■■□□□ 1.51
FARP1-229ENST00000600190 RTL5Q5HYW3 569 aaPredicted RBP24.47■■□□□ 1.51
FARP1-229ENST00000600190 DUSP27Q5VZP5 1158 aa24.47■■□□□ 1.51
FARP1-229ENST00000600190 TMC4Q7Z404 712 aa24.47■■□□□ 1.51
FARP1-229ENST00000600190 CAPNS2Q96L46 248 aa24.47■■□□□ 1.51
FARP1-229ENST00000600190 CFAP44Q96MT7 982 aa24.47■■□□□ 1.51
FARP1-229ENST00000600190 ISCA1Q9BUE6 129 aa24.47■■□□□ 1.51
FARP1-229ENST00000600190 ECE1P42892 770 aa24.46■■□□□ 1.51
FARP1-229ENST00000600190 CYP4F22Q6NT55 531 aa24.46■■□□□ 1.51
FARP1-229ENST00000600190 HYPKQ9NX55 129 aa24.46■■□□□ 1.51
FARP1-229ENST00000600190 TRPM7Q96QT4 1865 aa24.45■■□□□ 1.51
FARP1-229ENST00000600190 MBIPQ9NS73 344 aa24.45■■□□□ 1.5
FARP1-229ENST00000600190 NSFL1CQ9UNZ2 370 aaKnown RBP24.45■■□□□ 1.5
FARP1-229ENST00000600190 DDX60Q8IY21 1712 aaKnown RBP24.44■■□□□ 1.5
FARP1-229ENST00000600190 YDJCA8MPS7 323 aa24.44■■□□□ 1.5
FARP1-229ENST00000600190 HSPA8P11142 646 aaKnown RBP24.44■■□□□ 1.5
FARP1-229ENST00000600190 SF3B3Q15393 1217 aaKnown RBP24.44■■□□□ 1.5
FARP1-229ENST00000600190 CELF1Q92879 486 aaKnown RBP24.44■■□□□ 1.5
FARP1-229ENST00000600190 GPR101Q96P66 508 aaPredicted RBP24.44■■□□□ 1.5
FARP1-229ENST00000600190 GLIS2Q9BZE0 524 aaPredicted RBP24.44■■□□□ 1.5
FARP1-229ENST00000600190 TLL2Q9Y6L7 1015 aa24.44■■□□□ 1.5
FARP1-229ENST00000600190 CDHR2Q9BYE9 1310 aa24.43■■□□□ 1.5
FARP1-229ENST00000600190 WASHC4Q2M389 1173 aa24.43■■□□□ 1.5
FARP1-229ENST00000600190 CNOT7Q9UIV1 285 aaKnown RBP24.43■■□□□ 1.5
FARP1-229ENST00000600190 RIMBP2O15034 1052 aa24.42■■□□□ 1.5
FARP1-229ENST00000600190 CELF2O95319 508 aaKnown RBP24.42■■□□□ 1.5
FARP1-229ENST00000600190 HIRAP54198 1017 aaPredicted RBP24.42■■□□□ 1.5
FARP1-229ENST00000600190 BEGAINQ9BUH8 593 aa24.42■■□□□ 1.5
FARP1-229ENST00000600190 PGAP2Q9UHJ9 254 aa24.42■■□□□ 1.5
FARP1-229ENST00000600190 C6orf229H3BNL8 230 aa24.41■■□□□ 1.5
FARP1-229ENST00000600190 H7C1D1 291 aa24.41■■□□□ 1.5
FARP1-229ENST00000600190 IRS4O14654 1257 aaPredicted RBP24.41■■□□□ 1.5
FARP1-229ENST00000600190 RIC3Q7Z5B4 369 aa24.41■■□□□ 1.5
FARP1-229ENST00000600190 ZNF408Q9H9D4 720 aa24.41■■□□□ 1.5
FARP1-229ENST00000600190 DUOX1Q9NRD9 1551 aa24.41■■□□□ 1.5
FARP1-229ENST00000600190 SHTN1A0MZ66 631 aa24.4■■□□□ 1.5
FARP1-229ENST00000600190 TRPM4Q8TD43 1214 aa24.4■■□□□ 1.5
FARP1-229ENST00000600190 ZC3H15Q8WU90 426 aaKnown RBP24.4■■□□□ 1.5
FARP1-229ENST00000600190 DBNDD1Q9H9R9 158 aa24.4■■□□□ 1.5
FARP1-229ENST00000600190 ZBTB12Q9Y330 459 aaPredicted RBP24.4■■□□□ 1.5
FARP1-229ENST00000600190 LRRC37AA6NMS7 1700 aa24.4■■□□□ 1.5
FARP1-229ENST00000600190 ELL2O00472 640 aaPredicted RBP24.39■■□□□ 1.49
FARP1-229ENST00000600190 GPSM2P81274 684 aa24.39■■□□□ 1.49
FARP1-229ENST00000600190 TRIM28Q13263 835 aaKnown RBP24.39■■□□□ 1.49
FARP1-229ENST00000600190 SAPCD2Q86UD0 394 aa24.39■■□□□ 1.49
FARP1-229ENST00000600190 MICALL2Q8IY33 904 aa24.39■■□□□ 1.49
FARP1-229ENST00000600190 POLLQ9UGP5 575 aa24.39■■□□□ 1.49
FARP1-229ENST00000600190 APAF1O14727 1248 aa24.38■■□□□ 1.49
FARP1-229ENST00000600190 AOC2O75106 756 aa24.38■■□□□ 1.49
FARP1-229ENST00000600190 ZNF853P0CG23 659 aa24.38■■□□□ 1.49
FARP1-229ENST00000600190 GOLGA2Q08379 1002 aa24.38■■□□□ 1.49
FARP1-229ENST00000600190 CDC37L1Q7L3B6 337 aa24.38■■□□□ 1.49
FARP1-229ENST00000600190 PHAXQ9H814 394 aaKnown RBP24.38■■□□□ 1.49
FARP1-229ENST00000600190 MRS2Q9HD23 443 aa24.38■■□□□ 1.49
FARP1-229ENST00000600190 PSMD14O00487 310 aa24.37■■□□□ 1.49
FARP1-229ENST00000600190 RPS8P62241 208 aaKnown RBP24.37■■□□□ 1.49
FARP1-229ENST00000600190 GNAI1P63096 354 aa24.36■■□□□ 1.49
FARP1-229ENST00000600190 DOK7Q18PE1 504 aa24.36■■□□□ 1.49
FARP1-229ENST00000600190 DIEXFQ68CQ4 756 aaKnown RBP24.36■■□□□ 1.49
FARP1-229ENST00000600190 SAMD7Q7Z3H4 446 aa24.36■■□□□ 1.49
FARP1-229ENST00000600190 ZBTB38Q8NAP3 1195 aaPredicted RBP24.36■■□□□ 1.49
FARP1-229ENST00000600190 EYA3Q99504 573 aa24.36■■□□□ 1.49
FARP1-229ENST00000600190 MYD88Q99836 296 aa24.36■■□□□ 1.49
FARP1-229ENST00000600190 IFT57Q9NWB7 429 aa24.36■■□□□ 1.49
FARP1-229ENST00000600190 COL4A1P02462 1669 aa24.36■■□□□ 1.49
FARP1-229ENST00000600190 THSD7BQ9C0I4 1608 aa24.35■■□□□ 1.49
FARP1-229ENST00000600190 MAP2K2P36507 400 aa24.35■■□□□ 1.49
FARP1-229ENST00000600190 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
FARP1-229ENST00000600190 USP48Q86UV5 1035 aa24.35■■□□□ 1.49
FARP1-229ENST00000600190 DPF2Q92785 391 aa24.35■■□□□ 1.49
FARP1-229ENST00000600190 KCNQ5Q9NR82 932 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms