RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 TTLL11Q8NHH1 800 aa23.8■■□□□ 1.4
COPE-209ENST00000599964 CRBNQ96SW2 442 aa23.8■■□□□ 1.4
COPE-209ENST00000599964 BICC1Q9H694 974 aaKnown RBP23.8■■□□□ 1.4
COPE-209ENST00000599964 CSF1RP07333 972 aa23.79■■□□□ 1.4
COPE-209ENST00000599964 AAMPQ13685 434 aa23.79■■□□□ 1.4
COPE-209ENST00000599964 LMBR1LQ6UX01 489 aa23.79■■□□□ 1.4
COPE-209ENST00000599964 C3orf67Q6ZVT6 689 aa23.79■■□□□ 1.4
COPE-209ENST00000599964 ZNF622Q969S3 477 aaKnown RBP eCLIP23.79■■□□□ 1.4
COPE-209ENST00000599964 SYT17Q9BSW7 474 aa23.79■■□□□ 1.4
COPE-209ENST00000599964 CHMP3Q9Y3E7 222 aa23.79■■□□□ 1.4
COPE-209ENST00000599964 RTL9Q8NET4 1388 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 A0A0G2JLW4 131 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 DPEP1P16444 411 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 CHRNA5P30532 468 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 ALDH1B1P30837 517 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 HOXA10P31260 410 aaPredicted RBP23.78■■□□□ 1.4
COPE-209ENST00000599964 CNKSR1Q969H4 720 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 KAZALD1Q96I82 304 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 ZBTB40Q9NUA8 1239 aa23.78■■□□□ 1.4
COPE-209ENST00000599964 COL11A2P13942 1736 aaPredicted RBP23.77■■□□□ 1.4
COPE-209ENST00000599964 NEFLP07196 543 aa23.77■■□□□ 1.4
COPE-209ENST00000599964 CCDC57Q2TAC2 916 aa23.77■■□□□ 1.4
COPE-209ENST00000599964 RABL6Q3YEC7 729 aaPredicted RBP23.77■■□□□ 1.4
COPE-209ENST00000599964 EPHA10Q5JZY3 1008 aa23.77■■□□□ 1.4
COPE-209ENST00000599964 CRAMP1Q96RY5 1269 aa23.77■■□□□ 1.4
COPE-209ENST00000599964 PIM2Q9P1W9 311 aa23.77■■□□□ 1.4
COPE-209ENST00000599964 DLEC1Q9Y238 1755 aa23.77■■□□□ 1.4
COPE-209ENST00000599964 IFIT5Q13325 482 aaKnown RBP23.76■■□□□ 1.39
COPE-209ENST00000599964 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
COPE-209ENST00000599964 CDC5LQ99459 802 aaKnown RBP23.76■■□□□ 1.39
COPE-209ENST00000599964 ANKRD18BA2A2Z9 1011 aa23.75■■□□□ 1.39
COPE-209ENST00000599964 ANKRD44Q8N8A2 993 aa23.75■■□□□ 1.39
COPE-209ENST00000599964 NLGN2Q8NFZ4 835 aa23.75■■□□□ 1.39
COPE-209ENST00000599964 GREM2Q9H772 168 aa23.75■■□□□ 1.39
COPE-209ENST00000599964 KIAA1551Q9HCM1 1747 aa23.75■■□□□ 1.39
COPE-209ENST00000599964 FAM161AQ3B820 660 aa23.74■■□□□ 1.39
COPE-209ENST00000599964 ITGA6P23229 1130 aa23.73■■□□□ 1.39
COPE-209ENST00000599964 MTX1Q13505 466 aa23.73■■□□□ 1.39
COPE-209ENST00000599964 GRAPQ13588 217 aa23.73■■□□□ 1.39
COPE-209ENST00000599964 TAF7LQ5H9L4 462 aa23.73■■□□□ 1.39
COPE-209ENST00000599964 TTLL6Q8N841 843 aa23.73■■□□□ 1.39
COPE-209ENST00000599964 GRAPLQ8TC17 118 aaPredicted RBP23.73■■□□□ 1.39
COPE-209ENST00000599964 C1orf115Q9H7X2 142 aa23.73■■□□□ 1.39
COPE-209ENST00000599964 BBOX1O75936 387 aa23.72■■□□□ 1.39
COPE-209ENST00000599964 KCNA3P22001 575 aa23.72■■□□□ 1.39
COPE-209ENST00000599964 IRX6P78412 446 aaPredicted RBP23.72■■□□□ 1.39
COPE-209ENST00000599964 TMC4Q7Z404 712 aa23.72■■□□□ 1.39
COPE-209ENST00000599964 ANKRD18AQ8IVF6 992 aa23.72■■□□□ 1.39
COPE-209ENST00000599964 TMX4Q9H1E5 349 aaPredicted RBP23.72■■□□□ 1.39
COPE-209ENST00000599964 SRGAP3O43295 1099 aa23.71■■□□□ 1.39
COPE-209ENST00000599964 IGHMBP2P38935 993 aaKnown RBP23.71■■□□□ 1.39
COPE-209ENST00000599964 DALRD3Q5D0E6 543 aaKnown RBP23.71■■□□□ 1.39
COPE-209ENST00000599964 RPAP2Q8IXW5 612 aaPredicted RBP23.71■■□□□ 1.39
COPE-209ENST00000599964 SEC31BQ9NQW1 1179 aa23.71■■□□□ 1.39
COPE-209ENST00000599964 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
COPE-209ENST00000599964 ATP8B2P98198 1209 aa23.7■■□□□ 1.38
COPE-209ENST00000599964 EXOC6Q8TAG9 804 aa23.7■■□□□ 1.38
COPE-209ENST00000599964 HMMRO75330 724 aa23.69■■□□□ 1.38
COPE-209ENST00000599964 PRPF40BQ6NWY9 871 aaKnown RBP23.69■■□□□ 1.38
COPE-209ENST00000599964 MPHOSPH8Q99549 860 aa23.69■■□□□ 1.38
COPE-209ENST00000599964 PPEF1O14829 653 aaPredicted RBP23.68■■□□□ 1.38
COPE-209ENST00000599964 CEP85Q6P2H3 762 aa23.68■■□□□ 1.38
COPE-209ENST00000599964 CELF1Q92879 486 aaKnown RBP23.68■■□□□ 1.38
COPE-209ENST00000599964 BRCA1P38398 1863 aaKnown RBP23.67■■□□□ 1.38
COPE-209ENST00000599964 BCS1LQ9Y276 419 aa23.67■■□□□ 1.38
COPE-209ENST00000599964 CACNA1SQ13698 1873 aa23.66■■□□□ 1.38
COPE-209ENST00000599964 SOGA3Q5TF21 947 aa23.66■■□□□ 1.38
COPE-209ENST00000599964 CC2D2BQ6DHV5 1058 aa23.65■■□□□ 1.38
COPE-209ENST00000599964 LDHAL6AQ6ZMR3 332 aa23.65■■□□□ 1.38
COPE-209ENST00000599964 BSDC1Q9NW68 430 aaPredicted RBP23.65■■□□□ 1.38
COPE-209ENST00000599964 PNMA6EA0A0J9YXQ4 647 aa23.64■■□□□ 1.37
COPE-209ENST00000599964 SSH3Q8TE77 659 aa23.64■■□□□ 1.37
COPE-209ENST00000599964 CNNM1Q9NRU3 951 aa23.64■■□□□ 1.37
COPE-209ENST00000599964 FBXO3Q9UK99 471 aa23.64■■□□□ 1.37
COPE-209ENST00000599964 ATP6V0A2Q9Y487 856 aa23.64■■□□□ 1.37
COPE-209ENST00000599964 TAF1P21675 1872 aa23.64■■□□□ 1.37
COPE-209ENST00000599964 RFX5P48382 616 aaPredicted RBP23.63■■□□□ 1.37
COPE-209ENST00000599964 POLA2Q14181 598 aa23.63■■□□□ 1.37
COPE-209ENST00000599964 GRIPAP1Q4V328 841 aa23.63■■□□□ 1.37
COPE-209ENST00000599964 SP8Q8IXZ3 490 aa23.63■■□□□ 1.37
COPE-209ENST00000599964 COPRSQ9NQ92 184 aa23.63■■□□□ 1.37
COPE-209ENST00000599964 WWC3Q9ULE0 1092 aa23.63■■□□□ 1.37
COPE-209ENST00000599964 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
COPE-209ENST00000599964 PTPN12Q05209 780 aaKnown RBP23.62■■□□□ 1.37
COPE-209ENST00000599964 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
COPE-209ENST00000599964 ZNF594Q96JF6 807 aaPredicted RBP23.62■■□□□ 1.37
COPE-209ENST00000599964 SPEF2Q9C093 1822 aa23.61■■□□□ 1.37
COPE-209ENST00000599964 C21orf2O43822 256 aa23.61■■□□□ 1.37
COPE-209ENST00000599964 ZNF219Q9P2Y4 722 aaPredicted RBP23.61■■□□□ 1.37
COPE-209ENST00000599964 DCAF8L1A6NGE4 600 aa23.6■■□□□ 1.37
COPE-209ENST00000599964 CIAO1O76071 339 aa23.6■■□□□ 1.37
COPE-209ENST00000599964 CCDC93Q567U6 631 aa23.6■■□□□ 1.37
COPE-209ENST00000599964 KLHDC4Q8TBB5 520 aa23.6■■□□□ 1.37
COPE-209ENST00000599964 ANKRD2Q9GZV1 360 aa23.6■■□□□ 1.37
COPE-209ENST00000599964 ARFGEF1Q9Y6D6 1849 aa23.6■■□□□ 1.37
COPE-209ENST00000599964 EYA2O00167 538 aa23.59■■□□□ 1.37
COPE-209ENST00000599964 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.373e-10■□□□□ 11.3
COPE-209ENST00000599964 GPR162Q16538 588 aa23.59■■□□□ 1.37
COPE-209ENST00000599964 HSP90AB4PQ58FF6 505 aa23.59■■□□□ 1.37
COPE-209ENST00000599964 C7orf43Q8WVR3 580 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms