RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
ZNF544-215ENST00000599953 AFDNP55196 1824 aaKnown RBP12.84□□□□□ -0.35
ZNF544-215ENST00000599953 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
ZNF544-215ENST00000599953 CPDO75976 1380 aa12.84□□□□□ -0.35
ZNF544-215ENST00000599953 TERF1P54274 439 aa12.83□□□□□ -0.35
ZNF544-215ENST00000599953 KRT85P78386 507 aa12.83□□□□□ -0.35
ZNF544-215ENST00000599953 TFCP2Q12800 502 aa12.83□□□□□ -0.35
ZNF544-215ENST00000599953 DBNLQ9UJU6 430 aaKnown RBP12.83□□□□□ -0.35
ZNF544-215ENST00000599953 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.36
ZNF544-215ENST00000599953 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
ZNF544-215ENST00000599953 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
ZNF544-215ENST00000599953 USPL1Q5W0Q7 1092 aa12.83□□□□□ -0.36
ZNF544-215ENST00000599953 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
ZNF544-215ENST00000599953 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
ZNF544-215ENST00000599953 TAF5LO75529 589 aa12.82□□□□□ -0.36
ZNF544-215ENST00000599953 ST3GAL1Q11201 340 aa12.82□□□□□ -0.36
ZNF544-215ENST00000599953 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
ZNF544-215ENST00000599953 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
ZNF544-215ENST00000599953 DDX54Q8TDD1 881 aaKnown RBP12.82□□□□□ -0.36
ZNF544-215ENST00000599953 HAUS7Q99871 368 aa12.82□□□□□ -0.36
ZNF544-215ENST00000599953 CHRNA2Q15822 529 aa12.81□□□□□ -0.36
ZNF544-215ENST00000599953 ELP1O95163 1332 aa12.81□□□□□ -0.36
ZNF544-215ENST00000599953 SPATA31A3Q5VYP0 1347 aa12.81□□□□□ -0.36
ZNF544-215ENST00000599953 ATP5J2-PTCD1G3V325 749 aa12.81□□□□□ -0.36
ZNF544-215ENST00000599953 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
ZNF544-215ENST00000599953 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
ZNF544-215ENST00000599953 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
ZNF544-215ENST00000599953 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
ZNF544-215ENST00000599953 PCDH11XQ9BZA7 1347 aa12.8□□□□□ -0.36
ZNF544-215ENST00000599953 PCDH11YQ9BZA8 1340 aa12.8□□□□□ -0.36
ZNF544-215ENST00000599953 CASP7P55210 303 aa12.8□□□□□ -0.36
ZNF544-215ENST00000599953 TOB2Q14106 344 aaPredicted RBP12.8□□□□□ -0.36
ZNF544-215ENST00000599953 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
ZNF544-215ENST00000599953 DDX17Q92841 729 aaKnown RBP12.8□□□□□ -0.36
ZNF544-215ENST00000599953 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
ZNF544-215ENST00000599953 SCAND2PQ9GZW5 306 aaPredicted RBP12.8□□□□□ -0.36
ZNF544-215ENST00000599953 GPR108Q9NPR9 543 aa12.8□□□□□ -0.36
ZNF544-215ENST00000599953 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
ZNF544-215ENST00000599953 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
ZNF544-215ENST00000599953 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
ZNF544-215ENST00000599953 DBNDD2Q9BQY9 259 aa12.79□□□□□ -0.36
ZNF544-215ENST00000599953 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
ZNF544-215ENST00000599953 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
ZNF544-215ENST00000599953 H7C1W4 665 aa12.79□□□□□ -0.36
ZNF544-215ENST00000599953 KBTBD3Q8NAB2 608 aa12.79□□□□□ -0.36
ZNF544-215ENST00000599953 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
ZNF544-215ENST00000599953 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
ZNF544-215ENST00000599953 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
ZNF544-215ENST00000599953 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
ZNF544-215ENST00000599953 TPRNQ4KMQ1 711 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 CDC37L1Q7L3B6 337 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 GOLGA6L4A6NEF3 574 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
ZNF544-215ENST00000599953 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 GTF3C6Q969F1 213 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 HELLSQ9NRZ9 838 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 ZNF609O15014 1411 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 GLI3P10071 1580 aa12.78□□□□□ -0.36
ZNF544-215ENST00000599953 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.36
ZNF544-215ENST00000599953 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.36
ZNF544-215ENST00000599953 TCEANC2Q96MN5 208 aa12.77□□□□□ -0.36
ZNF544-215ENST00000599953 FUCA2Q9BTY2 467 aa12.77□□□□□ -0.36
ZNF544-215ENST00000599953 USP25Q9UHP3 1055 aa12.77□□□□□ -0.36
ZNF544-215ENST00000599953 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
ZNF544-215ENST00000599953 ADCY5O95622 1261 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 FGD1P98174 961 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 FOXO4P98177 505 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 CCDC191Q8NCU4 936 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 CHMP4CQ96CF2 233 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 WDR17Q8IZU2 1322 aa12.77□□□□□ -0.37
ZNF544-215ENST00000599953 KDM4AO75164 1064 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 STK3Q13188 491 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
ZNF544-215ENST00000599953 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
ZNF544-215ENST00000599953 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 SPATA32Q96LK8 384 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 NEUROD6Q96NK8 337 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 LLPHQ9BRT6 129 aaKnown RBP12.76□□□□□ -0.37
ZNF544-215ENST00000599953 DSCC1Q9BVC3 393 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 NUP62CLQ9H1M0 184 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 PAG1Q9NWQ8 432 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 MAP3K11Q16584 847 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
ZNF544-215ENST00000599953 Q6ZUG5 572 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 ZSCAN16Q9H4T2 348 aaPredicted RBP12.76□□□□□ -0.37
ZNF544-215ENST00000599953 DDX19AQ9NUU7 478 aaKnown RBP12.76□□□□□ -0.37
ZNF544-215ENST00000599953 TAF6LQ9Y6J9 622 aa12.76□□□□□ -0.37
ZNF544-215ENST00000599953 H3BQV1 296 aa12.75□□□□□ -0.37
ZNF544-215ENST00000599953 CIAO1O76071 339 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms