RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 C1QTNF9BB2RNN3 333 aa11.6□□□□□ -0.55
LINC00343-208ENST00000599264 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
LINC00343-208ENST00000599264 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
LINC00343-208ENST00000599264 RGL4Q8IZJ4 473 aa11.6□□□□□ -0.55
LINC00343-208ENST00000599264 XYLBO75191 536 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 RGS9O75916 674 aaPredicted RBP11.59□□□□□ -0.55
LINC00343-208ENST00000599264 SASH3O75995 380 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 APBA3O96018 575 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 EGFRP00533 1210 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 TARSP26639 723 aaKnown RBP11.59□□□□□ -0.55
LINC00343-208ENST00000599264 TRAPPC3LQ5T215 181 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 PSAPL1Q6NUJ1 521 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 C8orf86Q6ZUL3 223 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 CD163Q86VB7 1156 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 CCDC82Q8N4S0 544 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 SAP130Q9H0E3 1048 aa11.59□□□□□ -0.55
LINC00343-208ENST00000599264 PPP1R15AO75807 674 aaPredicted RBP11.58□□□□□ -0.56
LINC00343-208ENST00000599264 NID1P14543 1247 aa11.58□□□□□ -0.56
LINC00343-208ENST00000599264 SUZ12Q15022 739 aaKnown RBP11.58□□□□□ -0.56
LINC00343-208ENST00000599264 FAM35AQ86V20 835 aa11.58□□□□□ -0.56
LINC00343-208ENST00000599264 NUDT8Q8WV74 236 aa11.58□□□□□ -0.56
LINC00343-208ENST00000599264 ATP2B4P23634 1241 aa11.57□□□□□ -0.56
LINC00343-208ENST00000599264 COL9A3Q14050 684 aaPredicted RBP11.57□□□□□ -0.56
LINC00343-208ENST00000599264 NAA30Q147X3 362 aaPredicted RBP11.57□□□□□ -0.56
LINC00343-208ENST00000599264 TRPM4Q8TD43 1214 aa11.57□□□□□ -0.56
LINC00343-208ENST00000599264 NACC1Q96RE7 527 aa11.57□□□□□ -0.56
LINC00343-208ENST00000599264 NACADO15069 1562 aa11.56□□□□□ -0.56
LINC00343-208ENST00000599264 CHRNA4P43681 627 aa11.56□□□□□ -0.56
LINC00343-208ENST00000599264 BAG6P46379 1132 aa11.56□□□□□ -0.56
LINC00343-208ENST00000599264 ETFBKMTQ8IXQ9 262 aa11.56□□□□□ -0.56
LINC00343-208ENST00000599264 PIK3R5Q8WYR1 880 aa11.56□□□□□ -0.56
LINC00343-208ENST00000599264 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
LINC00343-208ENST00000599264 USP20Q9Y2K6 914 aa11.56□□□□□ -0.56
LINC00343-208ENST00000599264 CPB1P15086 417 aa11.55□□□□□ -0.56
LINC00343-208ENST00000599264 RAC1P63000 192 aa11.55□□□□□ -0.56
LINC00343-208ENST00000599264 GPLD1P80108 840 aa11.55□□□□□ -0.56
LINC00343-208ENST00000599264 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
LINC00343-208ENST00000599264 FRRS1LQ9P0K9 344 aa11.55□□□□□ -0.56
LINC00343-208ENST00000599264 PSAPP07602 524 aa11.54□□□□□ -0.56
LINC00343-208ENST00000599264 NRLP54845 237 aa11.54□□□□□ -0.56
LINC00343-208ENST00000599264 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
LINC00343-208ENST00000599264 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
LINC00343-208ENST00000599264 STIM2Q9P246 746 aa11.54□□□□□ -0.56
LINC00343-208ENST00000599264 NAGPAQ9UK23 515 aa11.53□□□□□ -0.56
LINC00343-208ENST00000599264 FNDC3AQ9Y2H6 1198 aaKnown RBP11.53□□□□□ -0.56
LINC00343-208ENST00000599264 GATA4P43694 442 aa11.52□□□□□ -0.57
LINC00343-208ENST00000599264 AFF1P51825 1210 aaKnown RBP11.52□□□□□ -0.57
LINC00343-208ENST00000599264 PLAURQ03405 335 aa11.52□□□□□ -0.57
LINC00343-208ENST00000599264 CAPN12Q6ZSI9 719 aa11.52□□□□□ -0.57
LINC00343-208ENST00000599264 KCNMB2Q9Y691 235 aa11.52□□□□□ -0.57
LINC00343-208ENST00000599264 FAM229AH3BQW9 127 aa11.51□□□□□ -0.57
LINC00343-208ENST00000599264 TNFRSF10BO14763 440 aa11.51□□□□□ -0.57
LINC00343-208ENST00000599264 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
LINC00343-208ENST00000599264 NLRP13Q86W25 1043 aa11.51□□□□□ -0.57
LINC00343-208ENST00000599264 RBSNQ9H1K0 784 aa11.51□□□□□ -0.57
LINC00343-208ENST00000599264 ZBTB42B2RXF5 422 aa11.5□□□□□ -0.57
LINC00343-208ENST00000599264 ZAP70P43403 619 aa11.5□□□□□ -0.57
LINC00343-208ENST00000599264 MLLT1Q03111 559 aaPredicted RBP11.5□□□□□ -0.57
LINC00343-208ENST00000599264 TTC9Q92623 222 aa11.5□□□□□ -0.57
LINC00343-208ENST00000599264 A0A0A0MRY4 1105 aa11.49□□□□□ -0.57
LINC00343-208ENST00000599264 UBAP1LF5GYI3 381 aa11.49□□□□□ -0.57
LINC00343-208ENST00000599264 ELNP15502 786 aa11.49□□□□□ -0.57
LINC00343-208ENST00000599264 EIF2AK2P19525 551 aaKnown RBP11.49□□□□□ -0.57
LINC00343-208ENST00000599264 SOX18P35713 384 aa11.49□□□□□ -0.57
LINC00343-208ENST00000599264 PERM1Q5SV97 790 aa11.49□□□□□ -0.57
LINC00343-208ENST00000599264 LPIN3Q9BQK8 851 aa11.49□□□□□ -0.57
LINC00343-208ENST00000599264 C9orf172C9J069 976 aa11.48□□□□□ -0.57
LINC00343-208ENST00000599264 K7ELQ4 463 aaPredicted RBP11.48□□□□□ -0.57
LINC00343-208ENST00000599264 ADAM23O75077 832 aa11.48□□□□□ -0.57
LINC00343-208ENST00000599264 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
LINC00343-208ENST00000599264 LOC102724428A0A0B4J2F2 783 aa11.47□□□□□ -0.57
LINC00343-208ENST00000599264 MMP20O60882 483 aa11.47□□□□□ -0.57
LINC00343-208ENST00000599264 GHRHP01286 108 aa11.47□□□□□ -0.57
LINC00343-208ENST00000599264 SIK1P57059 783 aa11.47□□□□□ -0.57
LINC00343-208ENST00000599264 MSL1Q68DK7 614 aa11.47□□□□□ -0.57
LINC00343-208ENST00000599264 DMRTC2Q8IXT2 367 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-208ENST00000599264 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
LINC00343-208ENST00000599264 GRIK4Q16099 956 aa11.46□□□□□ -0.57
LINC00343-208ENST00000599264 HFE2Q6ZVN8 426 aa11.46□□□□□ -0.57
LINC00343-208ENST00000599264 WFDC8Q8IUA0 241 aa11.46□□□□□ -0.57
LINC00343-208ENST00000599264 DTWD1Q8N5C7 304 aa11.46□□□□□ -0.57
LINC00343-208ENST00000599264 GPR152Q8TDT2 470 aa11.46□□□□□ -0.57
LINC00343-208ENST00000599264 SMG9Q9H0W8 520 aaKnown RBP11.46□□□□□ -0.57
LINC00343-208ENST00000599264 FURINP09958 794 aa11.45□□□□□ -0.58
LINC00343-208ENST00000599264 NRG1Q02297 640 aaPredicted RBP11.45□□□□□ -0.58
LINC00343-208ENST00000599264 SEPT3Q9UH03 358 aa11.45□□□□□ -0.58
LINC00343-208ENST00000599264 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
LINC00343-208ENST00000599264 RPLP1P05386 114 aaKnown RBP11.44□□□□□ -0.58
LINC00343-208ENST00000599264 HOXD8P13378 290 aaPredicted RBP11.44□□□□□ -0.58
LINC00343-208ENST00000599264 TRIP4Q15650 581 aaPredicted RBP11.44□□□□□ -0.58
LINC00343-208ENST00000599264 FAM26DQ5JW98 314 aa11.44□□□□□ -0.58
LINC00343-208ENST00000599264 TTC39BQ5VTQ0 682 aaPredicted RBP11.44□□□□□ -0.58
LINC00343-208ENST00000599264 NSUN5Q96P11 429 aaKnown RBP11.44□□□□□ -0.58
LINC00343-208ENST00000599264 C1orf115Q9H7X2 142 aa11.44□□□□□ -0.58
LINC00343-208ENST00000599264 PCSK2P16519 638 aa11.43□□□□□ -0.58
LINC00343-208ENST00000599264 FMR1NBQ8N0W7 255 aaPredicted RBP11.43□□□□□ -0.58
LINC00343-208ENST00000599264 HELQQ8TDG4 1101 aa11.43□□□□□ -0.58
LINC00343-208ENST00000599264 PLD4Q96BZ4 506 aa11.43□□□□□ -0.58
LINC00343-208ENST00000599264 J3QW42 95 aa11.42□□□□□ -0.58
LINC00343-208ENST00000599264 DOC2BQ14184 412 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms