RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 PCCAP05165 728 aaPredicted RBP15.63■□□□□ 0.09
LIG1-217ENST00000599165 VEGFAP15692 232 aaPredicted RBP15.63■□□□□ 0.09
LIG1-217ENST00000599165 RTFDC1Q9BY42 306 aaPredicted RBP15.63■□□□□ 0.09
LIG1-217ENST00000599165 BBOX1O75936 387 aa15.62■□□□□ 0.09
LIG1-217ENST00000599165 FLIIQ13045 1269 aa15.62■□□□□ 0.09
LIG1-217ENST00000599165 CWF19L2Q2TBE0 894 aaKnown RBP15.62■□□□□ 0.09
LIG1-217ENST00000599165 SP8Q8IXZ3 490 aa15.62■□□□□ 0.09
LIG1-217ENST00000599165 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
LIG1-217ENST00000599165 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
LIG1-217ENST00000599165 CHMP4AQ9BY43 222 aa15.62■□□□□ 0.09
LIG1-217ENST00000599165 CWC25Q9NXE8 425 aaPredicted RBP15.62■□□□□ 0.09
LIG1-217ENST00000599165 DDX58O95786 925 aaKnown RBP15.61■□□□□ 0.09
LIG1-217ENST00000599165 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
LIG1-217ENST00000599165 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
LIG1-217ENST00000599165 DPY19L2Q6NUT2 758 aa15.61■□□□□ 0.09
LIG1-217ENST00000599165 DDX46Q7L014 1031 aaKnown RBP15.61■□□□□ 0.09
LIG1-217ENST00000599165 SPEF2Q9C093 1822 aa15.6■□□□□ 0.09
LIG1-217ENST00000599165 NEURL1BA8MQ27 555 aa15.6■□□□□ 0.09
LIG1-217ENST00000599165 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
LIG1-217ENST00000599165 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
LIG1-217ENST00000599165 CDHR2Q9BYE9 1310 aa15.6■□□□□ 0.09
LIG1-217ENST00000599165 FSTL1Q12841 308 aa15.59■□□□□ 0.09
LIG1-217ENST00000599165 AOC3Q16853 763 aa15.59■□□□□ 0.09
LIG1-217ENST00000599165 MYH16Q9H6N6 1097 aa15.59■□□□□ 0.09
LIG1-217ENST00000599165 H7C1W4 665 aa15.58■□□□□ 0.08
LIG1-217ENST00000599165 CCER2I3L3R5 266 aa15.58■□□□□ 0.08
LIG1-217ENST00000599165 CASP7P55210 303 aa15.58■□□□□ 0.08
LIG1-217ENST00000599165 C16orf71Q8IYS4 520 aaPredicted RBP15.58■□□□□ 0.08
LIG1-217ENST00000599165 LARGE2Q8N3Y3 721 aa15.58■□□□□ 0.08
LIG1-217ENST00000599165 SCN9AQ15858 1988 aa15.57■□□□□ 0.08
LIG1-217ENST00000599165 PPIP5K2O43314 1243 aa15.57■□□□□ 0.08
LIG1-217ENST00000599165 PDE8AO60658 829 aa15.57■□□□□ 0.08
LIG1-217ENST00000599165 HTRA3P83110 453 aa15.57■□□□□ 0.08
LIG1-217ENST00000599165 MPNDQ8N594 471 aa15.57■□□□□ 0.08
LIG1-217ENST00000599165 SMC1BQ8NDV3 1235 aa15.57■□□□□ 0.08
LIG1-217ENST00000599165 DNAAF4Q8WXU2 420 aa15.57■□□□□ 0.08
LIG1-217ENST00000599165 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
LIG1-217ENST00000599165 F6X3S4 739 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 RPS8P62241 208 aaKnown RBP15.56■□□□□ 0.08
LIG1-217ENST00000599165 GPSM2P81274 684 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 KIAA2012Q0VF49 1180 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 FKBP5Q13451 457 aaPredicted RBP15.56■□□□□ 0.08
LIG1-217ENST00000599165 GCKRQ14397 625 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 DPP8Q6V1X1 898 aaPredicted RBP15.56■□□□□ 0.08
LIG1-217ENST00000599165 TMC4Q7Z404 712 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 GPC2Q8N158 579 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 DNAJC5GQ8N7S2 189 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 CDCA7LQ96GN5 454 aa15.56■□□□□ 0.08
LIG1-217ENST00000599165 CCDC85AQ96PX6 553 aaPredicted RBP15.56■□□□□ 0.08
LIG1-217ENST00000599165 SCNN1DP51172 638 aa15.55■□□□□ 0.08
LIG1-217ENST00000599165 CTSWP56202 376 aa15.55■□□□□ 0.08
LIG1-217ENST00000599165 TTLL11Q8NHH1 800 aa15.55■□□□□ 0.08
LIG1-217ENST00000599165 JDP2Q8WYK2 163 aa15.55■□□□□ 0.08
LIG1-217ENST00000599165 VPS33BQ9H267 617 aa15.55■□□□□ 0.08
LIG1-217ENST00000599165 POLLQ9UGP5 575 aa15.55■□□□□ 0.08
LIG1-217ENST00000599165 YDJCA8MPS7 323 aa15.54■□□□□ 0.08
LIG1-217ENST00000599165 APLP1P51693 650 aa15.54■□□□□ 0.08
LIG1-217ENST00000599165 NEXNQ0ZGT2 675 aa15.54■□□□□ 0.08
LIG1-217ENST00000599165 BEND3Q5T5X7 828 aa15.54■□□□□ 0.08
LIG1-217ENST00000599165 UBE3BQ7Z3V4 1068 aa15.54■□□□□ 0.08
LIG1-217ENST00000599165 TRMT2AQ8IZ69 625 aaKnown RBP15.54■□□□□ 0.08
LIG1-217ENST00000599165 LINS1Q8NG48 757 aa15.54■□□□□ 0.08
LIG1-217ENST00000599165 GPR101Q96P66 508 aaPredicted RBP15.54■□□□□ 0.08
LIG1-217ENST00000599165 RTL9Q8NET4 1388 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 ZNF646O15015 1829 aaPredicted RBP15.53■□□□□ 0.08
LIG1-217ENST00000599165 CXCL9Q07325 125 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 CCDC152Q4G0S7 254 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 NIM1KQ8IY84 436 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 SUPT20HQ8NEM7 779 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 PLA2G12BQ9BX93 195 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 GREM2Q9H772 168 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 NSFL1CQ9UNZ2 370 aaKnown RBP15.53■□□□□ 0.08
LIG1-217ENST00000599165 A0A1B0GUL6 1792 aa15.53■□□□□ 0.08
LIG1-217ENST00000599165 PSME4Q14997 1843 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 IQCA1LA6NCM1 817 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 E9PSI1 815 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 EPHX2P34913 555 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 EIF6P56537 245 aaKnown RBP15.52■□□□□ 0.08
LIG1-217ENST00000599165 TBC1D16Q8TBP0 767 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 PODXL2Q9NZ53 605 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 HACL1Q9UJ83 578 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 ZNRF3Q9ULT6 936 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 GJA3Q9Y6H8 435 aa15.52■□□□□ 0.08
LIG1-217ENST00000599165 WTIPA6NIX2 430 aaPredicted RBP15.51■□□□□ 0.07
LIG1-217ENST00000599165 HSP90B1P14625 803 aaKnown RBP15.51■□□□□ 0.07
LIG1-217ENST00000599165 EPS15P42566 896 aa15.51■□□□□ 0.07
LIG1-217ENST00000599165 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
LIG1-217ENST00000599165 MRPL50Q8N5N7 158 aaKnown RBP15.51■□□□□ 0.07
LIG1-217ENST00000599165 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
LIG1-217ENST00000599165 PASKQ96RG2 1323 aa15.5■□□□□ 0.07
LIG1-217ENST00000599165 CSF1RP07333 972 aa15.5■□□□□ 0.07
LIG1-217ENST00000599165 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
LIG1-217ENST00000599165 ITGBL1O95965 494 aaPredicted RBP15.49■□□□□ 0.07
LIG1-217ENST00000599165 FOXO4P98177 505 aa15.49■□□□□ 0.07
LIG1-217ENST00000599165 FAM161AQ3B820 660 aa15.49■□□□□ 0.07
LIG1-217ENST00000599165 EPHA10Q5JZY3 1008 aa15.49■□□□□ 0.07
LIG1-217ENST00000599165 MIER1Q8N108 512 aa15.49■□□□□ 0.07
LIG1-217ENST00000599165 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
LIG1-217ENST00000599165 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms