RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 CCDC85AQ96PX6 553 aaPredicted RBP25.97■■□□□ 1.75
COPE-208ENST00000598969 PA2G4Q9UQ80 394 aaKnown RBP25.97■■□□□ 1.75
COPE-208ENST00000598969 NRXN2Q9P2S2 1712 aa25.97■■□□□ 1.75
COPE-208ENST00000598969 SLC16A10Q8TF71 515 aa25.97■■□□□ 1.75
COPE-208ENST00000598969 EXOC6BQ9Y2D4 811 aa25.97■■□□□ 1.75
COPE-208ENST00000598969 PTPN12Q05209 780 aaKnown RBP25.96■■□□□ 1.75
COPE-208ENST00000598969 R3HDM1Q15032 1099 aaKnown RBP25.96■■□□□ 1.75
COPE-208ENST00000598969 KLHDC4Q8TBB5 520 aa25.96■■□□□ 1.75
COPE-208ENST00000598969 GREM2Q9H772 168 aa25.96■■□□□ 1.75
COPE-208ENST00000598969 NOP58Q9Y2X3 529 aaKnown RBP25.96■■□□□ 1.75
COPE-208ENST00000598969 CASZ1Q86V15 1759 aa25.95■■□□□ 1.75
COPE-208ENST00000598969 RIC1Q4ADV7 1423 aa25.95■■□□□ 1.74
COPE-208ENST00000598969 NPHP1O15259 732 aa25.95■■□□□ 1.74
COPE-208ENST00000598969 SURF6O75683 361 aaKnown RBP25.95■■□□□ 1.74
COPE-208ENST00000598969 COPRSQ9NQ92 184 aa25.95■■□□□ 1.74
COPE-208ENST00000598969 TNRC6CQ9HCJ0 1690 aaKnown RBP25.94■■□□□ 1.74
COPE-208ENST00000598969 SF3B3Q15393 1217 aaKnown RBP25.94■■□□□ 1.74
COPE-208ENST00000598969 PARP3Q9Y6F1 533 aa25.94■■□□□ 1.74
COPE-208ENST00000598969 PDZRN3Q9UPQ7 1066 aa25.93■■□□□ 1.74
COPE-208ENST00000598969 ITGA6P23229 1130 aa25.92■■□□□ 1.74
COPE-208ENST00000598969 ST5P78524 1137 aa25.92■■□□□ 1.74
COPE-208ENST00000598969 CCDC57Q2TAC2 916 aa25.92■■□□□ 1.74
COPE-208ENST00000598969 NLRP3Q96P20 1036 aa25.92■■□□□ 1.74
COPE-208ENST00000598969 RTL9Q8NET4 1388 aa25.92■■□□□ 1.74
COPE-208ENST00000598969 IFIT5Q13325 482 aaKnown RBP25.92■■□□□ 1.74
COPE-208ENST00000598969 CCDC152Q4G0S7 254 aa25.92■■□□□ 1.74
COPE-208ENST00000598969 ZNF594Q96JF6 807 aaPredicted RBP25.92■■□□□ 1.74
COPE-208ENST00000598969 NUCB1Q02818 461 aa25.91■■□□□ 1.74
COPE-208ENST00000598969 ANKRD45Q5TZF3 282 aa25.9■■□□□ 1.74
COPE-208ENST00000598969 SKAP1Q86WV1 359 aa25.9■■□□□ 1.74
COPE-208ENST00000598969 APBB1O00213 710 aa25.9■■□□□ 1.74
COPE-208ENST00000598969 SIL1Q9H173 461 aa25.9■■□□□ 1.74
COPE-208ENST00000598969 SEC31BQ9NQW1 1179 aa25.9■■□□□ 1.74
COPE-208ENST00000598969 ANKRD18BA2A2Z9 1011 aa25.89■■□□□ 1.73
COPE-208ENST00000598969 PSDA5PKW4 1024 aaPredicted RBP25.88■■□□□ 1.73
COPE-208ENST00000598969 RAB11FIP3O75154 756 aa25.88■■□□□ 1.73
COPE-208ENST00000598969 HSP90AB4PQ58FF6 505 aa25.88■■□□□ 1.73
COPE-208ENST00000598969 TSHZ2Q9NRE2 1034 aa25.88■■□□□ 1.73
COPE-208ENST00000598969 ZBTB7AO95365 584 aa25.87■■□□□ 1.73
COPE-208ENST00000598969 ANKRD31Q8N7Z5 1873 aa25.87■■□□□ 1.73
COPE-208ENST00000598969 COL4A1P02462 1669 aa25.87■■□□□ 1.73
COPE-208ENST00000598969 SMARCA5O60264 1052 aaPredicted RBP25.87■■□□□ 1.73
COPE-208ENST00000598969 G3BP1Q13283 466 aaKnown RBP eCLIP25.87■■□□□ 1.736e-7■□□□□ 10.5
COPE-208ENST00000598969 CHD1LQ86WJ1 897 aa25.87■■□□□ 1.73
COPE-208ENST00000598969 PUS3Q9BZE2 481 aaKnown RBP25.86■■□□□ 1.73
COPE-208ENST00000598969 KLRG2A4D1S0 409 aaPredicted RBP25.85■■□□□ 1.73
COPE-208ENST00000598969 SASH1O94885 1247 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 OS9Q13438 667 aaPredicted RBP25.85■■□□□ 1.73
COPE-208ENST00000598969 CRY2Q49AN0 593 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 LRRC24Q50LG9 513 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 ATG9AQ7Z3C6 839 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 RHPN1Q8TCX5 695 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 BRIP1Q9BX63 1249 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 LRRCC1Q9C099 1032 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 LNPKQ9C0E8 428 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 MTFR1LQ9H019 292 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 LRP5O75197 1615 aa25.85■■□□□ 1.73
COPE-208ENST00000598969 EYA2O00167 538 aa25.84■■□□□ 1.73
COPE-208ENST00000598969 TAF7LQ5H9L4 462 aa25.84■■□□□ 1.73
COPE-208ENST00000598969 KIF1BPQ96EK5 621 aa25.84■■□□□ 1.73
COPE-208ENST00000598969 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.84■■□□□ 1.73
COPE-208ENST00000598969 CIAO1O76071 339 aa25.83■■□□□ 1.73
COPE-208ENST00000598969 PDE4AP27815 886 aa25.83■■□□□ 1.73
COPE-208ENST00000598969 RGS3P49796 1198 aa25.83■■□□□ 1.73
COPE-208ENST00000598969 ERC1Q8IUD2 1116 aa25.83■■□□□ 1.73
COPE-208ENST00000598969 FBXO3Q9UK99 471 aa25.83■■□□□ 1.73
COPE-208ENST00000598969 ATF5Q9Y2D1 282 aaPredicted RBP25.83■■□□□ 1.73
COPE-208ENST00000598969 TAF1P21675 1872 aa25.82■■□□□ 1.72
COPE-208ENST00000598969 LDHAL6AQ6ZMR3 332 aa25.82■■□□□ 1.72
COPE-208ENST00000598969 IL1RAPL2Q9NP60 686 aa25.82■■□□□ 1.72
COPE-208ENST00000598969 CELF1Q92879 486 aaKnown RBP25.81■■□□□ 1.72
COPE-208ENST00000598969 CDC5LQ99459 802 aaKnown RBP25.81■■□□□ 1.72
COPE-208ENST00000598969 RIPOR2Q9Y4F9 1068 aa25.81■■□□□ 1.72
COPE-208ENST00000598969 IL15P40933 162 aaPredicted RBP25.8■■□□□ 1.72
COPE-208ENST00000598969 DDX46Q7L014 1031 aaKnown RBP25.79■■□□□ 1.72
COPE-208ENST00000598969 C16orf71Q8IYS4 520 aaPredicted RBP25.79■■□□□ 1.72
COPE-208ENST00000598969 IGHMBP2P38935 993 aaKnown RBP25.79■■□□□ 1.72
COPE-208ENST00000598969 TFCP2Q12800 502 aa25.79■■□□□ 1.72
COPE-208ENST00000598969 ZBTB47Q9UFB7 747 aaPredicted RBP25.79■■□□□ 1.72
COPE-208ENST00000598969 HOXA10P31260 410 aaPredicted RBP25.78■■□□□ 1.72
COPE-208ENST00000598969 PDE6BP35913 854 aa25.78■■□□□ 1.72
COPE-208ENST00000598969 ANKRD18AQ8IVF6 992 aa25.78■■□□□ 1.72
COPE-208ENST00000598969 RPGRQ92834 1020 aaKnown RBP25.78■■□□□ 1.72
COPE-208ENST00000598969 BCL11AQ9H165 835 aa25.78■■□□□ 1.72
COPE-208ENST00000598969 CNNM1Q9NRU3 951 aa25.78■■□□□ 1.72
COPE-208ENST00000598969 SPEF2Q9C093 1822 aa25.78■■□□□ 1.72
COPE-208ENST00000598969 C10orf71Q711Q0 1435 aa25.78■■□□□ 1.72
COPE-208ENST00000598969 MPHOSPH8Q99549 860 aa25.77■■□□□ 1.72
COPE-208ENST00000598969 SGIP1Q9BQI5 828 aa25.77■■□□□ 1.72
COPE-208ENST00000598969 SRGNP10124 158 aa25.77■■□□□ 1.72
COPE-208ENST00000598969 COL11A2P13942 1736 aaPredicted RBP25.77■■□□□ 1.72
COPE-208ENST00000598969 RPS8P62241 208 aaKnown RBP25.77■■□□□ 1.72
COPE-208ENST00000598969 OTUD7AQ8TE49 926 aaPredicted RBP25.77■■□□□ 1.72
COPE-208ENST00000598969 GRAPQ13588 217 aa25.76■■□□□ 1.71
COPE-208ENST00000598969 GRAPLQ8TC17 118 aaPredicted RBP25.76■■□□□ 1.71
COPE-208ENST00000598969 POLD1P28340 1107 aa25.75■■□□□ 1.71
COPE-208ENST00000598969 RBM17Q96I25 401 aaKnown RBP25.75■■□□□ 1.71
COPE-208ENST00000598969 BSDC1Q9NW68 430 aaPredicted RBP25.75■■□□□ 1.71
COPE-208ENST00000598969 CLASRPQ8N2M8 674 aaKnown RBP25.74■■□□□ 1.71
COPE-208ENST00000598969 SALL3Q9BXA9 1300 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms