RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 COPS6Q7L5N1 327 aa18.33■□□□□ 0.52
TRPM4-209ENST00000598502 BOLA2Q9H3K6 86 aa18.33■□□□□ 0.52
TRPM4-209ENST00000598502 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.52
TRPM4-209ENST00000598502 HOXB7P09629 217 aa18.33■□□□□ 0.52
TRPM4-209ENST00000598502 RASEFQ8IZ41 740 aa18.33■□□□□ 0.52
TRPM4-209ENST00000598502 GRM8O00222 908 aa18.32■□□□□ 0.52
TRPM4-209ENST00000598502 LARP1BQ659C4 914 aaKnown RBP18.32■□□□□ 0.52
TRPM4-209ENST00000598502 DACT1Q9NYF0 836 aa18.32■□□□□ 0.52
TRPM4-209ENST00000598502 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
TRPM4-209ENST00000598502 ATP5J2-PTCD1G3V325 749 aa18.32■□□□□ 0.52
TRPM4-209ENST00000598502 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
TRPM4-209ENST00000598502 TERF2Q15554 542 aa18.32■□□□□ 0.52
TRPM4-209ENST00000598502 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
TRPM4-209ENST00000598502 DNAJC25Q9H1X3 360 aa18.32■□□□□ 0.52
TRPM4-209ENST00000598502 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 PRPF40BQ6NWY9 871 aaKnown RBP18.31■□□□□ 0.52
TRPM4-209ENST00000598502 HYPKQ9NX55 129 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 DDX41Q9UJV9 622 aaKnown RBP18.31■□□□□ 0.52
TRPM4-209ENST00000598502 SGSM2O43147 1006 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
TRPM4-209ENST00000598502 ZNF165P49910 485 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 NOL10Q9BSC4 688 aaKnown RBP18.31■□□□□ 0.52
TRPM4-209ENST00000598502 RGPD2P0DJD1 1756 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 SLFN14P0C7P3 912 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 KIF18AQ8NI77 898 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 IPO4Q8TEX9 1081 aaKnown RBP18.31■□□□□ 0.52
TRPM4-209ENST00000598502 C19orf44Q9H6X5 657 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
TRPM4-209ENST00000598502 ZNF330Q9Y3S2 320 aaPredicted RBP18.31■□□□□ 0.52
TRPM4-209ENST00000598502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.31■□□□□ 0.52
TRPM4-209ENST00000598502 STK3Q13188 491 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 ZNF496Q96IT1 587 aaPredicted RBP18.3■□□□□ 0.52
TRPM4-209ENST00000598502 ECHDC1Q9NTX5 307 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 PAXBP1Q9Y5B6 917 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
TRPM4-209ENST00000598502 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 ERBB3P21860 1342 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 KRT85P78386 507 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
TRPM4-209ENST00000598502 FAM208AQ9UK61 1670 aaKnown RBP18.3■□□□□ 0.52
TRPM4-209ENST00000598502 ZSCAN25Q6NSZ9 544 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 ZNF397Q8NF99 534 aaPredicted RBP18.29■□□□□ 0.52
TRPM4-209ENST00000598502 LINS1Q8NG48 757 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 TCEANC2Q96MN5 208 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 LIG1P18858 919 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 PTH1RQ03431 593 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 CBX8Q9HC52 389 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
TRPM4-209ENST00000598502 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
TRPM4-209ENST00000598502 HSPA4P34932 840 aa18.29■□□□□ 0.52
TRPM4-209ENST00000598502 CTIFO43310 598 aaKnown RBP18.28■□□□□ 0.52
TRPM4-209ENST00000598502 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
TRPM4-209ENST00000598502 NFAT5O94916 1531 aa18.28■□□□□ 0.52
TRPM4-209ENST00000598502 ALDH1L1O75891 902 aa18.28■□□□□ 0.52
TRPM4-209ENST00000598502 ANAPC15P60006 121 aa18.28■□□□□ 0.52
TRPM4-209ENST00000598502 ZRSR1Q15695 479 aaKnown RBP18.28■□□□□ 0.52
TRPM4-209ENST00000598502 TMX1Q9H3N1 280 aa18.28■□□□□ 0.52
TRPM4-209ENST00000598502 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
TRPM4-209ENST00000598502 CACTINQ8WUQ7 758 aaKnown RBP18.28■□□□□ 0.52
TRPM4-209ENST00000598502 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
TRPM4-209ENST00000598502 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
TRPM4-209ENST00000598502 SKILP12757 684 aa18.27■□□□□ 0.52
TRPM4-209ENST00000598502 HSPA2P54652 639 aa18.27■□□□□ 0.52
TRPM4-209ENST00000598502 EAF2Q96CJ1 260 aaPredicted RBP18.27■□□□□ 0.52
TRPM4-209ENST00000598502 SPATA32Q96LK8 384 aa18.27■□□□□ 0.52
TRPM4-209ENST00000598502 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
TRPM4-209ENST00000598502 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
TRPM4-209ENST00000598502 KMT5BQ4FZB7 885 aa18.27■□□□□ 0.52
TRPM4-209ENST00000598502 RAD50Q92878 1312 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
TRPM4-209ENST00000598502 GNL2Q13823 731 aaKnown RBP18.26■□□□□ 0.51
TRPM4-209ENST00000598502 UBE3BQ7Z3V4 1068 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
TRPM4-209ENST00000598502 SLC52A2Q9HAB3 445 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 PDRG1Q9NUG6 133 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 IGKV5-2P06315 115 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 AOX1Q06278 1338 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
TRPM4-209ENST00000598502 ADCK5Q3MIX3 580 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 EPHA10Q5JZY3 1008 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 FBXO38Q6PIJ6 1188 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
TRPM4-209ENST00000598502 A0A087WWV3 80 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 SASH1O94885 1247 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 CABP4P57796 275 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 ERC1Q8IUD2 1116 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 FAM177A1Q8N128 213 aaPredicted RBP18.25■□□□□ 0.51
TRPM4-209ENST00000598502 CCAR2Q8N163 923 aaKnown RBP18.25■□□□□ 0.51
TRPM4-209ENST00000598502 KAZALD1Q96I82 304 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 USP27XA6NNY8 438 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 PHKG2P15735 406 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 ZNF75DP51815 510 aa18.25■□□□□ 0.51
TRPM4-209ENST00000598502 IFNL2Q8IZJ0 200 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms