RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
LINC00343-206ENST00000598478 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
LINC00343-206ENST00000598478 LIMD1Q9UGP4 676 aa11.16□□□□□ -0.62
LINC00343-206ENST00000598478 PER1O15534 1290 aaPredicted RBP11.15□□□□□ -0.62
LINC00343-206ENST00000598478 PDE4DQ08499 809 aa11.15□□□□□ -0.62
LINC00343-206ENST00000598478 MYSM1Q5VVJ2 828 aa11.15□□□□□ -0.62
LINC00343-206ENST00000598478 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
LINC00343-206ENST00000598478 CDK15Q96Q40 435 aa11.15□□□□□ -0.62
LINC00343-206ENST00000598478 TFCP2L1Q9NZI6 479 aa11.15□□□□□ -0.62
LINC00343-206ENST00000598478 WWC3Q9ULE0 1092 aa11.15□□□□□ -0.62
LINC00343-206ENST00000598478 USP6P35125 1406 aa11.15□□□□□ -0.62
LINC00343-206ENST00000598478 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.63
LINC00343-206ENST00000598478 ARID5BQ14865 1188 aa11.14□□□□□ -0.63
LINC00343-206ENST00000598478 QPCTQ16769 361 aa11.14□□□□□ -0.63
LINC00343-206ENST00000598478 NPAS3Q8IXF0 933 aa11.14□□□□□ -0.63
LINC00343-206ENST00000598478 TSC1Q92574 1164 aa11.14□□□□□ -0.63
LINC00343-206ENST00000598478 KLF16Q9BXK1 252 aaPredicted RBP11.14□□□□□ -0.63
LINC00343-206ENST00000598478 WDR90Q96KV7 1748 aa11.14□□□□□ -0.63
LINC00343-206ENST00000598478 BRD4O60885 1362 aaPredicted RBP11.14□□□□□ -0.63
LINC00343-206ENST00000598478 TNS2Q63HR2 1409 aa11.13□□□□□ -0.63
LINC00343-206ENST00000598478 VEGFBP49765 207 aa11.13□□□□□ -0.63
LINC00343-206ENST00000598478 SCARF1Q14162 830 aa11.13□□□□□ -0.63
LINC00343-206ENST00000598478 AGERQ15109 404 aa11.13□□□□□ -0.63
LINC00343-206ENST00000598478 MSL1Q68DK7 614 aa11.13□□□□□ -0.63
LINC00343-206ENST00000598478 CSB-PGBD3P0DP91 1061 aa11.12□□□□□ -0.63
LINC00343-206ENST00000598478 TUSC1Q2TAM9 212 aa11.12□□□□□ -0.63
LINC00343-206ENST00000598478 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
LINC00343-206ENST00000598478 IRF7Q92985 503 aa11.12□□□□□ -0.63
LINC00343-206ENST00000598478 PURBQ96QR8 312 aaKnown RBP11.12□□□□□ -0.63
LINC00343-206ENST00000598478 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
LINC00343-206ENST00000598478 CARD10Q9BWT7 1032 aa11.12□□□□□ -0.63
LINC00343-206ENST00000598478 SLIT3O75094 1523 aa11.12□□□□□ -0.63
LINC00343-206ENST00000598478 H3BM21 787 aa11.11□□□□□ -0.63
LINC00343-206ENST00000598478 LILRB3O75022 631 aa11.11□□□□□ -0.63
LINC00343-206ENST00000598478 GMPRP36959 345 aa11.11□□□□□ -0.63
LINC00343-206ENST00000598478 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
LINC00343-206ENST00000598478 KLRG1Q96E93 195 aa11.11□□□□□ -0.63
LINC00343-206ENST00000598478 TOMM70O94826 608 aa11.1□□□□□ -0.63
LINC00343-206ENST00000598478 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
LINC00343-206ENST00000598478 CPSF1Q10570 1443 aaKnown RBP11.09□□□□□ -0.63
LINC00343-206ENST00000598478 ABCC6O95255 1503 aa11.09□□□□□ -0.63
LINC00343-206ENST00000598478 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
LINC00343-206ENST00000598478 NR5A1Q13285 461 aa11.09□□□□□ -0.63
LINC00343-206ENST00000598478 COL23A1Q86Y22 540 aaPredicted RBP11.09□□□□□ -0.63
LINC00343-206ENST00000598478 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
LINC00343-206ENST00000598478 PPIP5K1Q6PFW1 1433 aa11.09□□□□□ -0.63
LINC00343-206ENST00000598478 ZIC2O95409 532 aaPredicted RBP11.08□□□□□ -0.64
LINC00343-206ENST00000598478 NR3C2P08235 984 aa11.08□□□□□ -0.64
LINC00343-206ENST00000598478 SLC27A3Q5K4L6 730 aa11.08□□□□□ -0.64
LINC00343-206ENST00000598478 ARMC2Q8NEN0 867 aa11.08□□□□□ -0.64
LINC00343-206ENST00000598478 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
LINC00343-206ENST00000598478 SLC24A3Q9HC58 644 aa11.08□□□□□ -0.64
LINC00343-206ENST00000598478 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
LINC00343-206ENST00000598478 GRM5P41594 1212 aa11.07□□□□□ -0.64
LINC00343-206ENST00000598478 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
LINC00343-206ENST00000598478 HELBQ8NG08 1087 aaPredicted RBP11.07□□□□□ -0.64
LINC00343-206ENST00000598478 CD2APQ9Y5K6 639 aa11.07□□□□□ -0.64
LINC00343-206ENST00000598478 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
LINC00343-206ENST00000598478 CCDC7Q96M83 1385 aa11.06□□□□□ -0.64
LINC00343-206ENST00000598478 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
LINC00343-206ENST00000598478 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
LINC00343-206ENST00000598478 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
LINC00343-206ENST00000598478 CLK2P49760 499 aaKnown RBP11.05□□□□□ -0.64
LINC00343-206ENST00000598478 C1QTNF2Q9BXJ5 285 aa11.05□□□□□ -0.64
LINC00343-206ENST00000598478 IGSF1Q8N6C5 1336 aa11.05□□□□□ -0.64
LINC00343-206ENST00000598478 LY75O60449 1722 aa11.04□□□□□ -0.64
LINC00343-206ENST00000598478 DCAF11Q8TEB1 546 aa11.04□□□□□ -0.64
LINC00343-206ENST00000598478 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
LINC00343-206ENST00000598478 C6orf118Q5T5N4 469 aa11.03□□□□□ -0.64
LINC00343-206ENST00000598478 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
LINC00343-206ENST00000598478 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-206ENST00000598478 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
LINC00343-206ENST00000598478 IL2RBP14784 551 aa11.02□□□□□ -0.65
LINC00343-206ENST00000598478 LORP23490 312 aaPredicted RBP11.02□□□□□ -0.65
LINC00343-206ENST00000598478 SH3BP5LQ7L8J4 393 aa11.02□□□□□ -0.65
LINC00343-206ENST00000598478 ZSCAN1Q8NBB4 408 aa11.02□□□□□ -0.65
LINC00343-206ENST00000598478 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.65
LINC00343-206ENST00000598478 CABP1Q9NZU7 370 aa11.02□□□□□ -0.65
LINC00343-206ENST00000598478 FAM181BA6NEQ2 426 aa11.01□□□□□ -0.65
LINC00343-206ENST00000598478 HSPA1AP0DMV8 641 aaKnown RBP11.01□□□□□ -0.65
LINC00343-206ENST00000598478 HSPA1BP0DMV9 641 aaKnown RBP11.01□□□□□ -0.65
LINC00343-206ENST00000598478 FSHRP23945 695 aa11.01□□□□□ -0.65
LINC00343-206ENST00000598478 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
LINC00343-206ENST00000598478 POLR3EQ9NVU0 708 aa11.01□□□□□ -0.65
LINC00343-206ENST00000598478 CCNL1Q9UK58 526 aaPredicted RBP11.01□□□□□ -0.65
LINC00343-206ENST00000598478 MAP4K5Q9Y4K4 846 aa11.01□□□□□ -0.65
LINC00343-206ENST00000598478 NFAT5O94916 1531 aa11□□□□□ -0.65
LINC00343-206ENST00000598478 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
LINC00343-206ENST00000598478 MAN1A2O60476 641 aa11□□□□□ -0.65
LINC00343-206ENST00000598478 TRMT44Q8IYL2 757 aaKnown RBP11□□□□□ -0.65
LINC00343-206ENST00000598478 MEIOBQ8N635 442 aa11□□□□□ -0.65
LINC00343-206ENST00000598478 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
LINC00343-206ENST00000598478 NSD2O96028 1365 aa11□□□□□ -0.65
LINC00343-206ENST00000598478 CICQ96RK0 1608 aaPredicted RBP10.99□□□□□ -0.65
LINC00343-206ENST00000598478 QRICH2Q9H0J4 1663 aa10.99□□□□□ -0.65
LINC00343-206ENST00000598478 UPP2O95045 317 aa10.99□□□□□ -0.65
LINC00343-206ENST00000598478 BMP2P12643 396 aa10.99□□□□□ -0.65
LINC00343-206ENST00000598478 VASH1Q7L8A9 365 aaPredicted RBP10.99□□□□□ -0.65
LINC00343-206ENST00000598478 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
LINC00343-206ENST00000598478 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms