RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 F6X3S4 739 aa15.96■□□□□ 0.15
SYMPK-210ENST00000598329 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.15
SYMPK-210ENST00000598329 ALDH1L1O75891 902 aa15.96■□□□□ 0.15
SYMPK-210ENST00000598329 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
SYMPK-210ENST00000598329 RTFDC1Q9BY42 306 aaPredicted RBP15.96■□□□□ 0.15
SYMPK-210ENST00000598329 VPS33BQ9H267 617 aa15.96■□□□□ 0.15
SYMPK-210ENST00000598329 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
SYMPK-210ENST00000598329 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
SYMPK-210ENST00000598329 RTL9Q8NET4 1388 aa15.96■□□□□ 0.15
SYMPK-210ENST00000598329 LAMB2P55268 1798 aa15.95■□□□□ 0.14
SYMPK-210ENST00000598329 CSF1RP07333 972 aa15.95■□□□□ 0.14
SYMPK-210ENST00000598329 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
SYMPK-210ENST00000598329 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
SYMPK-210ENST00000598329 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
SYMPK-210ENST00000598329 UTYO14607 1347 aa15.94■□□□□ 0.14
SYMPK-210ENST00000598329 CTSWP56202 376 aa15.94■□□□□ 0.14
SYMPK-210ENST00000598329 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
SYMPK-210ENST00000598329 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
SYMPK-210ENST00000598329 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
SYMPK-210ENST00000598329 UBE3BQ7Z3V4 1068 aa15.92■□□□□ 0.14
SYMPK-210ENST00000598329 ARHGAP45Q92619 1136 aa15.92■□□□□ 0.14
SYMPK-210ENST00000598329 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
SYMPK-210ENST00000598329 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
SYMPK-210ENST00000598329 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
SYMPK-210ENST00000598329 GLTPD2A6NH11 291 aa15.91■□□□□ 0.14
SYMPK-210ENST00000598329 GRM8O00222 908 aa15.91■□□□□ 0.14
SYMPK-210ENST00000598329 SLC51AQ86UW1 340 aa15.91■□□□□ 0.14
SYMPK-210ENST00000598329 SEC31BQ9NQW1 1179 aa15.91■□□□□ 0.14
SYMPK-210ENST00000598329 FZD9O00144 591 aa15.9■□□□□ 0.14
SYMPK-210ENST00000598329 IARSP41252 1262 aaKnown RBP15.9■□□□□ 0.14
SYMPK-210ENST00000598329 FOXO4P98177 505 aa15.9■□□□□ 0.14
SYMPK-210ENST00000598329 BCL2L13Q9BXK5 485 aa15.9■□□□□ 0.14
SYMPK-210ENST00000598329 GPBP1L1Q9HC44 474 aaPredicted RBP15.9■□□□□ 0.14
SYMPK-210ENST00000598329 ZNF277Q9NRM2 450 aaPredicted RBP15.9■□□□□ 0.14
SYMPK-210ENST00000598329 PODXL2Q9NZ53 605 aa15.9■□□□□ 0.14
SYMPK-210ENST00000598329 CACNA1SQ13698 1873 aa15.9■□□□□ 0.14
SYMPK-210ENST00000598329 DICER1Q9UPY3 1922 aaKnown RBP15.9■□□□□ 0.14
SYMPK-210ENST00000598329 COL4A1P02462 1669 aa15.89■□□□□ 0.13
SYMPK-210ENST00000598329 LRRC37AA6NMS7 1700 aa15.89■□□□□ 0.13
SYMPK-210ENST00000598329 MPNDQ8N594 471 aa15.89■□□□□ 0.13
SYMPK-210ENST00000598329 TMX4Q9H1E5 349 aaPredicted RBP15.89■□□□□ 0.13
SYMPK-210ENST00000598329 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
SYMPK-210ENST00000598329 KIF3CO14782 793 aa15.88■□□□□ 0.13
SYMPK-210ENST00000598329 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
SYMPK-210ENST00000598329 SUPT20HQ8NEM7 779 aa15.88■□□□□ 0.13
SYMPK-210ENST00000598329 KAZALD1Q96I82 304 aa15.88■□□□□ 0.13
SYMPK-210ENST00000598329 CDC5LQ99459 802 aaKnown RBP15.88■□□□□ 0.13
SYMPK-210ENST00000598329 GREM2Q9H772 168 aa15.88■□□□□ 0.13
SYMPK-210ENST00000598329 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
SYMPK-210ENST00000598329 KDM2BQ8NHM5 1336 aa15.88■□□□□ 0.13
SYMPK-210ENST00000598329 KIF16BQ96L93 1317 aa15.88■□□□□ 0.13
SYMPK-210ENST00000598329 DPY19L2Q6NUT2 758 aa15.87■□□□□ 0.13
SYMPK-210ENST00000598329 DPP8Q6V1X1 898 aaPredicted RBP15.87■□□□□ 0.13
SYMPK-210ENST00000598329 API5Q9BZZ5 524 aaKnown RBP15.87■□□□□ 0.13
SYMPK-210ENST00000598329 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
SYMPK-210ENST00000598329 NBPF7P0C2Y1 421 aaPredicted RBP15.86■□□□□ 0.13
SYMPK-210ENST00000598329 KIAA2012Q0VF49 1180 aa15.86■□□□□ 0.13
SYMPK-210ENST00000598329 RABL6Q3YEC7 729 aaPredicted RBP15.86■□□□□ 0.13
SYMPK-210ENST00000598329 EPHA10Q5JZY3 1008 aa15.86■□□□□ 0.13
SYMPK-210ENST00000598329 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
SYMPK-210ENST00000598329 L3MBTL3Q96JM7 780 aaPredicted RBP15.86■□□□□ 0.13
SYMPK-210ENST00000598329 C9orf78Q9NZ63 289 aaPredicted RBP15.86■□□□□ 0.13
SYMPK-210ENST00000598329 DUOX1Q9NRD9 1551 aa15.86■□□□□ 0.13
SYMPK-210ENST00000598329 TAF1P21675 1872 aa15.86■□□□□ 0.13
SYMPK-210ENST00000598329 CCDC88AQ3V6T2 1871 aa15.85■□□□□ 0.13
SYMPK-210ENST00000598329 POTECB2RU33 542 aa15.85■□□□□ 0.13
SYMPK-210ENST00000598329 ITGA6P23229 1130 aa15.85■□□□□ 0.13
SYMPK-210ENST00000598329 CCT4P50991 539 aaKnown RBP15.85■□□□□ 0.13
SYMPK-210ENST00000598329 POLLQ9UGP5 575 aa15.85■□□□□ 0.13
SYMPK-210ENST00000598329 COL4A5P29400 1685 aa15.85■□□□□ 0.13
SYMPK-210ENST00000598329 LTBP1Q14766 1721 aa15.85■□□□□ 0.13
SYMPK-210ENST00000598329 IPO8O15397 1037 aaKnown RBP15.84■□□□□ 0.13
SYMPK-210ENST00000598329 GPSM2P81274 684 aa15.84■□□□□ 0.13
SYMPK-210ENST00000598329 INTS3Q68E01 1043 aaKnown RBP15.84■□□□□ 0.13
SYMPK-210ENST00000598329 JDP2Q8WYK2 163 aa15.84■□□□□ 0.13
SYMPK-210ENST00000598329 NMRK2Q9NPI5 230 aa15.84■□□□□ 0.13
SYMPK-210ENST00000598329 MINPP1Q9UNW1 487 aa15.84■□□□□ 0.13
SYMPK-210ENST00000598329 MYH3P11055 1940 aa15.84■□□□□ 0.13
SYMPK-210ENST00000598329 TIAM2Q8IVF5 1701 aa15.83■□□□□ 0.13
SYMPK-210ENST00000598329 BCAR3O75815 825 aa15.83■□□□□ 0.12
SYMPK-210ENST00000598329 FAM161AQ3B820 660 aa15.83■□□□□ 0.12
SYMPK-210ENST00000598329 LMBR1LQ6UX01 489 aa15.83■□□□□ 0.12
SYMPK-210ENST00000598329 LARGE2Q8N3Y3 721 aa15.83■□□□□ 0.12
SYMPK-210ENST00000598329 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.12
SYMPK-210ENST00000598329 ZNF526Q8TF50 670 aaPredicted RBP15.83■□□□□ 0.12
SYMPK-210ENST00000598329 SUCLG2Q96I99 432 aa15.83■□□□□ 0.12
SYMPK-210ENST00000598329 CCDC85AQ96PX6 553 aaPredicted RBP15.83■□□□□ 0.12
SYMPK-210ENST00000598329 NSFL1CQ9UNZ2 370 aaKnown RBP15.83■□□□□ 0.12
SYMPK-210ENST00000598329 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
SYMPK-210ENST00000598329 PPIP5K2O43314 1243 aa15.82■□□□□ 0.12
SYMPK-210ENST00000598329 VEGFAP15692 232 aaPredicted RBP15.82■□□□□ 0.12
SYMPK-210ENST00000598329 AOC3Q16853 763 aa15.82■□□□□ 0.12
SYMPK-210ENST00000598329 ATF7IPQ6VMQ6 1270 aa15.82■□□□□ 0.12
SYMPK-210ENST00000598329 GPC2Q8N158 579 aa15.82■□□□□ 0.12
SYMPK-210ENST00000598329 ZNRF3Q9ULT6 936 aa15.82■□□□□ 0.12
SYMPK-210ENST00000598329 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
SYMPK-210ENST00000598329 TOMM70O94826 608 aa15.81■□□□□ 0.12
SYMPK-210ENST00000598329 DDNO94850 711 aaPredicted RBP15.81■□□□□ 0.12
SYMPK-210ENST00000598329 TRIM27P14373 513 aa15.81■□□□□ 0.12
SYMPK-210ENST00000598329 IGHMBP2P38935 993 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms