RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 THSD7BQ9C0I4 1608 aa21.64■■□□□ 1.05
SHKBP1-215ENST00000597649 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 ZNF316A6NFI3 1004 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 YDJCA8MPS7 323 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 RIPK4P57078 832 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 AIMP1Q12904 312 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 CIAPIN1Q6FI81 312 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 TRPM4Q8TD43 1214 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 XAGE3Q8WTP9 111 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 NECTIN2Q92692 538 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 BEGAINQ9BUH8 593 aa21.63■■□□□ 1.05
SHKBP1-215ENST00000597649 TRPM7Q96QT4 1865 aa21.62■■□□□ 1.05
SHKBP1-215ENST00000597649 ZNF428Q96B54 188 aa21.62■■□□□ 1.05
SHKBP1-215ENST00000597649 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-215ENST00000597649 TCIRG1Q13488 830 aa21.61■■□□□ 1.05
SHKBP1-215ENST00000597649 DLK2Q6UY11 383 aa21.61■■□□□ 1.05
SHKBP1-215ENST00000597649 CCDC85CA6NKD9 419 aa21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 GRAPQ13588 217 aa21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 KRT24Q2M2I5 525 aa21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 DDX46Q7L014 1031 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 GRAPLQ8TC17 118 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 BCL2L13Q9BXK5 485 aa21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 BABAM1Q9NWV8 329 aa21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 TRMT112Q9UI30 125 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 CNOT7Q9UIV1 285 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-215ENST00000597649 TNIP1Q15025 636 aa21.59■■□□□ 1.05
SHKBP1-215ENST00000597649 ZC3H15Q8WU90 426 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-215ENST00000597649 HHIPL1Q96JK4 782 aa21.59■■□□□ 1.05
SHKBP1-215ENST00000597649 ZIC5Q96T25 663 aa21.59■■□□□ 1.05
SHKBP1-215ENST00000597649 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-215ENST00000597649 RGS19P49795 217 aa21.58■■□□□ 1.05
SHKBP1-215ENST00000597649 HSP90AB3PQ58FF7 597 aa21.58■■□□□ 1.05
SHKBP1-215ENST00000597649 ZNF408Q9H9D4 720 aa21.58■■□□□ 1.05
SHKBP1-215ENST00000597649 SH3TC1Q8TE82 1336 aa21.57■■□□□ 1.04
SHKBP1-215ENST00000597649 CDC37L1Q7L3B6 337 aa21.57■■□□□ 1.04
SHKBP1-215ENST00000597649 USP48Q86UV5 1035 aa21.57■■□□□ 1.04
SHKBP1-215ENST00000597649 ZBTB12Q9Y330 459 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-215ENST00000597649 CDHR2Q9BYE9 1310 aa21.56■■□□□ 1.04
SHKBP1-215ENST00000597649 BRPF1P55201 1214 aaPredicted RBP21.55■■□□□ 1.04
SHKBP1-215ENST00000597649 MICALL2Q8IY33 904 aa21.55■■□□□ 1.04
SHKBP1-215ENST00000597649 LAMB2P55268 1798 aa21.55■■□□□ 1.04
SHKBP1-215ENST00000597649 TAF1P21675 1872 aa21.55■■□□□ 1.04
SHKBP1-215ENST00000597649 DUOX1Q9NRD9 1551 aa21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 CHL1O00533 1208 aa21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 CA12O43570 354 aa21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 EGFRP00533 1210 aa21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 SAMD7Q7Z3H4 446 aa21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 CELF1Q92879 486 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 MCOLN1Q9GZU1 580 aa21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 KCNQ5Q9NR82 932 aa21.54■■□□□ 1.04
SHKBP1-215ENST00000597649 ANKRD36CQ5JPF3 1778 aa21.53■■□□□ 1.04
SHKBP1-215ENST00000597649 H7C1D1 291 aa21.53■■□□□ 1.04
SHKBP1-215ENST00000597649 PSMD14O00487 310 aa21.53■■□□□ 1.04
SHKBP1-215ENST00000597649 FAM89AQ96GI7 184 aa21.53■■□□□ 1.04
SHKBP1-215ENST00000597649 CHPF2Q9P2E5 772 aa21.53■■□□□ 1.04
SHKBP1-215ENST00000597649 POLLQ9UGP5 575 aa21.53■■□□□ 1.04
SHKBP1-215ENST00000597649 SLC34A2O95436 690 aa21.52■■□□□ 1.04
SHKBP1-215ENST00000597649 MLLT1Q03111 559 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-215ENST00000597649 WASHC4Q2M389 1173 aa21.52■■□□□ 1.04
SHKBP1-215ENST00000597649 DPF2Q92785 391 aa21.52■■□□□ 1.04
SHKBP1-215ENST00000597649 ISCA1Q9BUE6 129 aa21.52■■□□□ 1.04
SHKBP1-215ENST00000597649 DBNDD1Q9H9R9 158 aa21.52■■□□□ 1.04
SHKBP1-215ENST00000597649 CASP8AP2Q9UKL3 1982 aa21.52■■□□□ 1.04
SHKBP1-215ENST00000597649 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 TNRC18O15417 2968 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 HUNKP57058 714 aa21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 GPSM2P81274 684 aa21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 SF3B3Q15393 1217 aaKnown RBP21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 TBC1D10BQ4KMP7 808 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 TMC4Q7Z404 712 aa21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 NSFL1CQ9UNZ2 370 aaKnown RBP21.51■■□□□ 1.03
SHKBP1-215ENST00000597649 ATP5J2-PTCD1G3V325 749 aa21.5■■□□□ 1.03
SHKBP1-215ENST00000597649 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
SHKBP1-215ENST00000597649 PLBD2Q8NHP8 589 aa21.5■■□□□ 1.03
SHKBP1-215ENST00000597649 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
SHKBP1-215ENST00000597649 COL4A1P02462 1669 aa21.5■■□□□ 1.03
SHKBP1-215ENST00000597649 LMOD3Q0VAK6 560 aa21.49■■□□□ 1.03
SHKBP1-215ENST00000597649 DDX10Q13206 875 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-215ENST00000597649 NOGQ13253 232 aa21.49■■□□□ 1.03
SHKBP1-215ENST00000597649 DOK7Q18PE1 504 aa21.49■■□□□ 1.03
SHKBP1-215ENST00000597649 ANKRD13DQ6ZTN6 518 aa21.49■■□□□ 1.03
SHKBP1-215ENST00000597649 CCDC146Q8IYE0 955 aa21.49■■□□□ 1.03
SHKBP1-215ENST00000597649 LAS1LQ9Y4W2 734 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-215ENST00000597649 FAM155AB1AL88 458 aaPredicted RBP21.48■■□□□ 1.03
SHKBP1-215ENST00000597649 RTL5Q5HYW3 569 aaPredicted RBP21.48■■□□□ 1.03
SHKBP1-215ENST00000597649 KRT26Q7Z3Y9 468 aa21.48■■□□□ 1.03
SHKBP1-215ENST00000597649 RTL9Q8NET4 1388 aa21.48■■□□□ 1.03
SHKBP1-215ENST00000597649 ADM5C9JUS6 153 aa21.47■■□□□ 1.03
SHKBP1-215ENST00000597649 C6orf229H3BNL8 230 aa21.47■■□□□ 1.03
SHKBP1-215ENST00000597649 DGKZQ13574 1117 aa21.47■■□□□ 1.03
SHKBP1-215ENST00000597649 RBM26Q5T8P6 1007 aaKnown RBP21.47■■□□□ 1.03
SHKBP1-215ENST00000597649 HDGFL1Q5TGJ6 251 aa21.47■■□□□ 1.03
SHKBP1-215ENST00000597649 ECE2O60344 883 aa21.46■■□□□ 1.03
SHKBP1-215ENST00000597649 TBC1D16Q8TBP0 767 aa21.46■■□□□ 1.03
SHKBP1-215ENST00000597649 RALBP1Q15311 655 aa21.45■■□□□ 1.02
SHKBP1-215ENST00000597649 RGMBQ6NW40 437 aa21.45■■□□□ 1.02
SHKBP1-215ENST00000597649 CFAP44Q96MT7 982 aa21.45■■□□□ 1.02
SHKBP1-215ENST00000597649 GBA2Q9HCG7 927 aaPredicted RBP21.45■■□□□ 1.02
SHKBP1-215ENST00000597649 LRRC37AA6NMS7 1700 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms