RNA–Protein interactions for RNA: ENST00000597573.1

PDE4C-212, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 603 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-212ENST00000597573 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.68
PDE4C-212ENST00000597573 RFX5P48382 616 aaPredicted RBP19.32■□□□□ 0.68
PDE4C-212ENST00000597573 ST5P78524 1137 aa19.32■□□□□ 0.68
PDE4C-212ENST00000597573 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
PDE4C-212ENST00000597573 PDGFDQ9GZP0 370 aaPredicted RBP19.32■□□□□ 0.68
PDE4C-212ENST00000597573 PARP3Q9Y6F1 533 aa19.32■□□□□ 0.68
PDE4C-212ENST00000597573 CCDC152Q4G0S7 254 aa19.31■□□□□ 0.68
PDE4C-212ENST00000597573 COPRSQ9NQ92 184 aa19.31■□□□□ 0.68
PDE4C-212ENST00000597573 NOP58Q9Y2X3 529 aaKnown RBP19.31■□□□□ 0.68
PDE4C-212ENST00000597573 LRP5O75197 1615 aa19.3■□□□□ 0.68
PDE4C-212ENST00000597573 R3HDM1Q15032 1099 aaKnown RBP19.3■□□□□ 0.68
PDE4C-212ENST00000597573 SF3B3Q15393 1217 aaKnown RBP19.3■□□□□ 0.68
PDE4C-212ENST00000597573 CCDC57Q2TAC2 916 aa19.3■□□□□ 0.68
PDE4C-212ENST00000597573 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
PDE4C-212ENST00000597573 GREM2Q9H772 168 aa19.3■□□□□ 0.68
PDE4C-212ENST00000597573 SURF6O75683 361 aaKnown RBP19.29■□□□□ 0.68
PDE4C-212ENST00000597573 PTPN12Q05209 780 aaKnown RBP19.29■□□□□ 0.68
PDE4C-212ENST00000597573 IFIT5Q13325 482 aaKnown RBP19.29■□□□□ 0.68
PDE4C-212ENST00000597573 NLRP3Q96P20 1036 aa19.29■□□□□ 0.68
PDE4C-212ENST00000597573 PA2G4Q9UQ80 394 aaKnown RBP19.29■□□□□ 0.68
PDE4C-212ENST00000597573 EXOC6BQ9Y2D4 811 aa19.29■□□□□ 0.68
PDE4C-212ENST00000597573 ANKRD18BA2A2Z9 1011 aa19.28■□□□□ 0.68
PDE4C-212ENST00000597573 RAB11FIP3O75154 756 aa19.28■□□□□ 0.68
PDE4C-212ENST00000597573 ITGA6P23229 1130 aa19.28■□□□□ 0.68
PDE4C-212ENST00000597573 C3orf67Q6ZVT6 689 aa19.28■□□□□ 0.68
PDE4C-212ENST00000597573 CCDC24Q8N4L8 307 aa19.28■□□□□ 0.68
PDE4C-212ENST00000597573 CCDC85AQ96PX6 553 aaPredicted RBP19.28■□□□□ 0.68
PDE4C-212ENST00000597573 ANKRD31Q8N7Z5 1873 aa19.27■□□□□ 0.68
PDE4C-212ENST00000597573 NUCB1Q02818 461 aa19.27■□□□□ 0.68
PDE4C-212ENST00000597573 G3BP1Q13283 466 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDE4C-212ENST00000597573 ERC1Q8IUD2 1116 aa19.26■□□□□ 0.67
PDE4C-212ENST00000597573 KLHDC4Q8TBB5 520 aa19.26■□□□□ 0.67
PDE4C-212ENST00000597573 MTFR1LQ9H019 292 aa19.26■□□□□ 0.67
PDE4C-212ENST00000597573 FBXO3Q9UK99 471 aa19.26■□□□□ 0.67
PDE4C-212ENST00000597573 PDZRN3Q9UPQ7 1066 aa19.26■□□□□ 0.67
PDE4C-212ENST00000597573 OS9Q13438 667 aaPredicted RBP19.25■□□□□ 0.67
PDE4C-212ENST00000597573 TAF7LQ5H9L4 462 aa19.25■□□□□ 0.67
PDE4C-212ENST00000597573 ANKRD45Q5TZF3 282 aa19.25■□□□□ 0.67
PDE4C-212ENST00000597573 BRIP1Q9BX63 1249 aa19.25■□□□□ 0.67
PDE4C-212ENST00000597573 KLRG2A4D1S0 409 aaPredicted RBP19.24■□□□□ 0.67
PDE4C-212ENST00000597573 CIAO1O76071 339 aa19.24■□□□□ 0.67
PDE4C-212ENST00000597573 CRY2Q49AN0 593 aa19.24■□□□□ 0.67
PDE4C-212ENST00000597573 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
PDE4C-212ENST00000597573 KIF1BPQ96EK5 621 aa19.24■□□□□ 0.67
PDE4C-212ENST00000597573 ZNF594Q96JF6 807 aaPredicted RBP19.24■□□□□ 0.67
PDE4C-212ENST00000597573 CDC5LQ99459 802 aaKnown RBP19.24■□□□□ 0.67
PDE4C-212ENST00000597573 LRRCC1Q9C099 1032 aa19.24■□□□□ 0.67
PDE4C-212ENST00000597573 SIL1Q9H173 461 aa19.24■□□□□ 0.67
PDE4C-212ENST00000597573 ZBTB47Q9UFB7 747 aaPredicted RBP19.24■□□□□ 0.67
PDE4C-212ENST00000597573 PSDA5PKW4 1024 aaPredicted RBP19.23■□□□□ 0.67
PDE4C-212ENST00000597573 EYA2O00167 538 aa19.23■□□□□ 0.67
PDE4C-212ENST00000597573 APBB1O00213 710 aa19.23■□□□□ 0.67
PDE4C-212ENST00000597573 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
PDE4C-212ENST00000597573 RHPN1Q8TCX5 695 aa19.23■□□□□ 0.67
PDE4C-212ENST00000597573 SEC31BQ9NQW1 1179 aa19.23■□□□□ 0.67
PDE4C-212ENST00000597573 C10orf71Q711Q0 1435 aa19.23■□□□□ 0.67
PDE4C-212ENST00000597573 IL15P40933 162 aaPredicted RBP19.22■□□□□ 0.67
PDE4C-212ENST00000597573 COL4A1P02462 1669 aa19.21■□□□□ 0.67
PDE4C-212ENST00000597573 SPEF2Q9C093 1822 aa19.21■□□□□ 0.67
PDE4C-212ENST00000597573 PDE6BP35913 854 aa19.21■□□□□ 0.67
PDE4C-212ENST00000597573 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
PDE4C-212ENST00000597573 ATG9AQ7Z3C6 839 aa19.21■□□□□ 0.67
PDE4C-212ENST00000597573 LNPKQ9C0E8 428 aa19.21■□□□□ 0.67
PDE4C-212ENST00000597573 COL11A2P13942 1736 aaPredicted RBP19.2■□□□□ 0.66
PDE4C-212ENST00000597573 SASH1O94885 1247 aa19.2■□□□□ 0.66
PDE4C-212ENST00000597573 POLD1P28340 1107 aa19.2■□□□□ 0.66
PDE4C-212ENST00000597573 IGHMBP2P38935 993 aaKnown RBP19.2■□□□□ 0.66
PDE4C-212ENST00000597573 LRRC24Q50LG9 513 aa19.2■□□□□ 0.66
PDE4C-212ENST00000597573 LDHAL6AQ6ZMR3 332 aa19.2■□□□□ 0.66
PDE4C-212ENST00000597573 ANKRD18AQ8IVF6 992 aa19.2■□□□□ 0.66
PDE4C-212ENST00000597573 RPGRQ92834 1020 aaKnown RBP19.2■□□□□ 0.66
PDE4C-212ENST00000597573 PUS3Q9BZE2 481 aaKnown RBP19.2■□□□□ 0.66
PDE4C-212ENST00000597573 SMARCA5O60264 1052 aaPredicted RBP19.19■□□□□ 0.66
PDE4C-212ENST00000597573 HOXA10P31260 410 aaPredicted RBP19.19■□□□□ 0.66
PDE4C-212ENST00000597573 MPHOSPH8Q99549 860 aa19.19■□□□□ 0.66
PDE4C-212ENST00000597573 CNNM1Q9NRU3 951 aa19.19■□□□□ 0.66
PDE4C-212ENST00000597573 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
PDE4C-212ENST00000597573 RIPOR2Q9Y4F9 1068 aa19.19■□□□□ 0.66
PDE4C-212ENST00000597573 KIF13BQ9NQT8 1826 aa19.18■□□□□ 0.66
PDE4C-212ENST00000597573 TAF1P21675 1872 aa19.18■□□□□ 0.66
PDE4C-212ENST00000597573 GRAPQ13588 217 aa19.18■□□□□ 0.66
PDE4C-212ENST00000597573 GRAPLQ8TC17 118 aaPredicted RBP19.18■□□□□ 0.66
PDE4C-212ENST00000597573 RBM17Q96I25 401 aaKnown RBP19.18■□□□□ 0.66
PDE4C-212ENST00000597573 PDE4AP27815 886 aa19.17■□□□□ 0.66
PDE4C-212ENST00000597573 RPS8P62241 208 aaKnown RBP19.17■□□□□ 0.66
PDE4C-212ENST00000597573 CELF1Q92879 486 aaKnown RBP19.17■□□□□ 0.66
PDE4C-212ENST00000597573 CRAMP1Q96RY5 1269 aa19.17■□□□□ 0.66
PDE4C-212ENST00000597573 IL1RAPL2Q9NP60 686 aa19.17■□□□□ 0.66
PDE4C-212ENST00000597573 BSDC1Q9NW68 430 aaPredicted RBP19.17■□□□□ 0.66
PDE4C-212ENST00000597573 MROH5Q6ZUA9 1318 aa19.17■□□□□ 0.66
PDE4C-212ENST00000597573 SRGNP10124 158 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 NPR1P16066 1061 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 TFCP2Q12800 502 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 SKAP1Q86WV1 359 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 CLASRPQ8N2M8 674 aaKnown RBP19.16■□□□□ 0.66
PDE4C-212ENST00000597573 SGIP1Q9BQI5 828 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 GPR108Q9NPR9 543 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 CEP126Q9P2H0 1117 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 A0A1B0GUL6 1792 aa19.16■□□□□ 0.66
PDE4C-212ENST00000597573 METTL24Q5JXM2 366 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms