RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 PTPRCP08575 1304 aa20.85■□□□□ 0.93
CHERP-206ENST00000597261 TMC4Q7Z404 712 aa20.85■□□□□ 0.93
CHERP-206ENST00000597261 PLA2G12BQ9BX93 195 aa20.85■□□□□ 0.93
CHERP-206ENST00000597261 RPS8P62241 208 aaKnown RBP20.84■□□□□ 0.93
CHERP-206ENST00000597261 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
CHERP-206ENST00000597261 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
CHERP-206ENST00000597261 SLC51AQ86UW1 340 aa20.84■□□□□ 0.93
CHERP-206ENST00000597261 TTLL11Q8NHH1 800 aa20.84■□□□□ 0.93
CHERP-206ENST00000597261 CELF1Q92879 486 aaKnown RBP20.84■□□□□ 0.93
CHERP-206ENST00000597261 ALDH1L1O75891 902 aa20.83■□□□□ 0.93
CHERP-206ENST00000597261 RARSP54136 660 aaKnown RBP20.83■□□□□ 0.93
CHERP-206ENST00000597261 BCL2L13Q9BXK5 485 aa20.83■□□□□ 0.93
CHERP-206ENST00000597261 TMX4Q9H1E5 349 aaPredicted RBP20.83■□□□□ 0.93
CHERP-206ENST00000597261 GPBP1L1Q9HC44 474 aaPredicted RBP20.83■□□□□ 0.93
CHERP-206ENST00000597261 ZNF277Q9NRM2 450 aaPredicted RBP20.83■□□□□ 0.93
CHERP-206ENST00000597261 CSF1RP07333 972 aa20.82■□□□□ 0.92
CHERP-206ENST00000597261 CTSWP56202 376 aa20.82■□□□□ 0.92
CHERP-206ENST00000597261 RTFDC1Q9BY42 306 aaPredicted RBP20.82■□□□□ 0.92
CHERP-206ENST00000597261 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
CHERP-206ENST00000597261 SMC4Q9NTJ3 1288 aa20.82■□□□□ 0.92
CHERP-206ENST00000597261 ZBED9Q6R2W3 1325 aa20.81■□□□□ 0.92
CHERP-206ENST00000597261 SLC4A10Q6U841 1118 aa20.81■□□□□ 0.92
CHERP-206ENST00000597261 ZNF526Q8TF50 670 aaPredicted RBP20.81■□□□□ 0.92
CHERP-206ENST00000597261 SRCIN1Q9C0H9 1055 aa20.81■□□□□ 0.92
CHERP-206ENST00000597261 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
CHERP-206ENST00000597261 SBF1O95248 1867 aa20.8■□□□□ 0.92
CHERP-206ENST00000597261 FER1L6Q2WGJ9 1857 aa20.8■□□□□ 0.92
CHERP-206ENST00000597261 GLTPD2A6NH11 291 aa20.8■□□□□ 0.92
CHERP-206ENST00000597261 IARSP41252 1262 aaKnown RBP20.8■□□□□ 0.92
CHERP-206ENST00000597261 MPNDQ8N594 471 aa20.8■□□□□ 0.92
CHERP-206ENST00000597261 GRM8O00222 908 aa20.79■□□□□ 0.92
CHERP-206ENST00000597261 NOB1Q9ULX3 412 aaKnown RBP20.79■□□□□ 0.92
CHERP-206ENST00000597261 FOXO4P98177 505 aa20.78■□□□□ 0.92
CHERP-206ENST00000597261 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
CHERP-206ENST00000597261 GREM2Q9H772 168 aa20.78■□□□□ 0.92
CHERP-206ENST00000597261 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
CHERP-206ENST00000597261 RTL9Q8NET4 1388 aa20.77■□□□□ 0.92
CHERP-206ENST00000597261 FZD9O00144 591 aa20.77■□□□□ 0.92
CHERP-206ENST00000597261 KIF3CO14782 793 aa20.77■□□□□ 0.92
CHERP-206ENST00000597261 DPY19L2Q6NUT2 758 aa20.77■□□□□ 0.92
CHERP-206ENST00000597261 DPP8Q6V1X1 898 aaPredicted RBP20.77■□□□□ 0.92
CHERP-206ENST00000597261 SUPT20HQ8NEM7 779 aa20.77■□□□□ 0.92
CHERP-206ENST00000597261 ARHGAP45Q92619 1136 aa20.77■□□□□ 0.92
CHERP-206ENST00000597261 DDX60Q8IY21 1712 aaKnown RBP20.77■□□□□ 0.92
CHERP-206ENST00000597261 UTYO14607 1347 aa20.77■□□□□ 0.91
CHERP-206ENST00000597261 C9orf78Q9NZ63 289 aaPredicted RBP20.76■□□□□ 0.91
CHERP-206ENST00000597261 ANKRD18AQ8IVF6 992 aa20.75■□□□□ 0.91
CHERP-206ENST00000597261 CDC5LQ99459 802 aaKnown RBP20.75■□□□□ 0.91
CHERP-206ENST00000597261 NMRK2Q9NPI5 230 aa20.75■□□□□ 0.91
CHERP-206ENST00000597261 BSDC1Q9NW68 430 aaPredicted RBP20.75■□□□□ 0.91
CHERP-206ENST00000597261 NSFL1CQ9UNZ2 370 aaKnown RBP20.75■□□□□ 0.91
CHERP-206ENST00000597261 NBPF7P0C2Y1 421 aaPredicted RBP20.74■□□□□ 0.91
CHERP-206ENST00000597261 GPSM2P81274 684 aa20.74■□□□□ 0.91
CHERP-206ENST00000597261 EPHA10Q5JZY3 1008 aa20.74■□□□□ 0.91
CHERP-206ENST00000597261 JDP2Q8WYK2 163 aa20.74■□□□□ 0.91
CHERP-206ENST00000597261 API5Q9BZZ5 524 aaKnown RBP20.74■□□□□ 0.91
CHERP-206ENST00000597261 USP44Q9H0E7 712 aa20.74■□□□□ 0.91
CHERP-206ENST00000597261 RRAGCQ9HB90 399 aa20.74■□□□□ 0.91
CHERP-206ENST00000597261 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
CHERP-206ENST00000597261 LAMB2P55268 1798 aa20.74■□□□□ 0.91
CHERP-206ENST00000597261 POTECB2RU33 542 aa20.73■□□□□ 0.91
CHERP-206ENST00000597261 LARGE2Q8N3Y3 721 aa20.73■□□□□ 0.91
CHERP-206ENST00000597261 KAZALD1Q96I82 304 aa20.73■□□□□ 0.91
CHERP-206ENST00000597261 POLLQ9UGP5 575 aa20.73■□□□□ 0.91
CHERP-206ENST00000597261 BCAR3O75815 825 aa20.72■□□□□ 0.91
CHERP-206ENST00000597261 ITGA6P23229 1130 aa20.72■□□□□ 0.91
CHERP-206ENST00000597261 KIAA2012Q0VF49 1180 aa20.72■□□□□ 0.91
CHERP-206ENST00000597261 PPIP5K2O43314 1243 aa20.71■□□□□ 0.91
CHERP-206ENST00000597261 DDNO94850 711 aaPredicted RBP20.71■□□□□ 0.91
CHERP-206ENST00000597261 CCT4P50991 539 aaKnown RBP20.71■□□□□ 0.91
CHERP-206ENST00000597261 C1QTNF8P60827 252 aa20.71■□□□□ 0.91
CHERP-206ENST00000597261 AOC3Q16853 763 aa20.71■□□□□ 0.91
CHERP-206ENST00000597261 LMBR1LQ6UX01 489 aa20.71■□□□□ 0.91
CHERP-206ENST00000597261 MINPP1Q9UNW1 487 aa20.71■□□□□ 0.91
CHERP-206ENST00000597261 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
CHERP-206ENST00000597261 COL4A1P02462 1669 aa20.7■□□□□ 0.91
CHERP-206ENST00000597261 IPO8O15397 1037 aaKnown RBP20.7■□□□□ 0.9
CHERP-206ENST00000597261 VEGFAP15692 232 aaPredicted RBP20.7■□□□□ 0.9
CHERP-206ENST00000597261 FAM161AQ3B820 660 aa20.7■□□□□ 0.9
CHERP-206ENST00000597261 TBC1D16Q8TBP0 767 aa20.7■□□□□ 0.9
CHERP-206ENST00000597261 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
CHERP-206ENST00000597261 ZNRF3Q9ULT6 936 aa20.69■□□□□ 0.9
CHERP-206ENST00000597261 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
CHERP-206ENST00000597261 TAF1P21675 1872 aa20.69■□□□□ 0.9
CHERP-206ENST00000597261 ANKRD18BA2A2Z9 1011 aa20.68■□□□□ 0.9
CHERP-206ENST00000597261 TOMM70O94826 608 aa20.68■□□□□ 0.9
CHERP-206ENST00000597261 IGHMBP2P38935 993 aaKnown RBP20.68■□□□□ 0.9
CHERP-206ENST00000597261 IFIT5Q13325 482 aaKnown RBP20.68■□□□□ 0.9
CHERP-206ENST00000597261 WASHC4Q2M389 1173 aa20.68■□□□□ 0.9
CHERP-206ENST00000597261 RABL6Q3YEC7 729 aaPredicted RBP20.68■□□□□ 0.9
CHERP-206ENST00000597261 NIM1KQ8IY84 436 aa20.68■□□□□ 0.9
CHERP-206ENST00000597261 L3MBTL3Q96JM7 780 aaPredicted RBP20.68■□□□□ 0.9
CHERP-206ENST00000597261 ANKIB1Q9P2G1 1089 aa20.68■□□□□ 0.9
CHERP-206ENST00000597261 ZNF541Q9H0D2 1346 aa20.68■□□□□ 0.9
CHERP-206ENST00000597261 CCDC88AQ3V6T2 1871 aa20.67■□□□□ 0.9
CHERP-206ENST00000597261 C6orf229H3BNL8 230 aa20.67■□□□□ 0.9
CHERP-206ENST00000597261 EIF6P56537 245 aaKnown RBP20.67■□□□□ 0.9
CHERP-206ENST00000597261 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
CHERP-206ENST00000597261 GPC2Q8N158 579 aa20.67■□□□□ 0.9
CHERP-206ENST00000597261 GGA1Q9UJY5 639 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms