RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 BICC1Q9H694 974 aaKnown RBP14.3□□□□□ -0.12
SH2D3A-206ENST00000597254 BRCA1P38398 1863 aaKnown RBP14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 FAM177BA6PVY3 158 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 HMMRO75330 724 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 FOXO4P98177 505 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 MTX1Q13505 466 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 SYNE4Q8N205 404 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 SSH3Q8TE77 659 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 CDHR2Q9BYE9 1310 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 SCN7AQ01118 1682 aa14.29□□□□□ -0.12
SH2D3A-206ENST00000597254 POLA2Q14181 598 aa14.28□□□□□ -0.12
SH2D3A-206ENST00000597254 RABL6Q3YEC7 729 aaPredicted RBP14.28□□□□□ -0.12
SH2D3A-206ENST00000597254 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
SH2D3A-206ENST00000597254 PLA2G12BQ9BX93 195 aa14.28□□□□□ -0.12
SH2D3A-206ENST00000597254 DCTPP1Q9H773 170 aa14.28□□□□□ -0.12
SH2D3A-206ENST00000597254 ARFGEF1Q9Y6D6 1849 aa14.28□□□□□ -0.12
SH2D3A-206ENST00000597254 IRS4O14654 1257 aaPredicted RBP14.27□□□□□ -0.13
SH2D3A-206ENST00000597254 SRGAP3O43295 1099 aa14.27□□□□□ -0.13
SH2D3A-206ENST00000597254 NTSR2O95665 410 aa14.27□□□□□ -0.13
SH2D3A-206ENST00000597254 GCC1Q96CN9 775 aa14.27□□□□□ -0.13
SH2D3A-206ENST00000597254 SH3TC1Q8TE82 1336 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 H0YIN7 160 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 NPHP1O15259 732 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 PDE8AO60658 829 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 C9orf131Q5VYM1 1079 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 LMBR1LQ6UX01 489 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 C2CD5Q86YS7 1000 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 NYXQ9GZU5 481 aa14.26□□□□□ -0.13
SH2D3A-206ENST00000597254 CSF1RP07333 972 aa14.25□□□□□ -0.13
SH2D3A-206ENST00000597254 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
SH2D3A-206ENST00000597254 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
SH2D3A-206ENST00000597254 TTLL6Q8N841 843 aa14.25□□□□□ -0.13
SH2D3A-206ENST00000597254 NRXN2Q9P2S2 1712 aa14.24□□□□□ -0.13
SH2D3A-206ENST00000597254 CARMIL3Q8ND23 1372 aa14.24□□□□□ -0.13
SH2D3A-206ENST00000597254 ERFEQ4G0M1 354 aa14.24□□□□□ -0.13
SH2D3A-206ENST00000597254 SLC10A5Q5PT55 438 aa14.24□□□□□ -0.13
SH2D3A-206ENST00000597254 RNF181Q9P0P0 153 aa14.24□□□□□ -0.13
SH2D3A-206ENST00000597254 PDZRN3Q9UPQ7 1066 aa14.24□□□□□ -0.13
SH2D3A-206ENST00000597254 SURF6O75683 361 aaKnown RBP14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 HCLS1P14317 486 aaPredicted RBP14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 HSP90B1P14625 803 aaKnown RBP14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 PDE6BP35913 854 aa14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 RFX5P48382 616 aaPredicted RBP14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 NBPF5PQ86XG9 351 aaPredicted RBP14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 CNBD1Q8NA66 436 aa14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 TTLL11Q8NHH1 800 aa14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 BRIP1Q9BX63 1249 aa14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 CHMP3Q9Y3E7 222 aa14.23□□□□□ -0.13
SH2D3A-206ENST00000597254 KIF3CO14782 793 aa14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 CTSWP56202 376 aa14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 PRR5LQ6MZQ0 368 aa14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 ZNF622Q969S3 477 aaKnown RBP eCLIP14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 PA2G4Q9UQ80 394 aaKnown RBP14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 EXOC6BQ9Y2D4 811 aa14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 NOP58Q9Y2X3 529 aaKnown RBP14.22□□□□□ -0.13
SH2D3A-206ENST00000597254 ST5P78524 1137 aa14.21□□□□□ -0.13
SH2D3A-206ENST00000597254 NUCB1Q02818 461 aa14.21□□□□□ -0.13
SH2D3A-206ENST00000597254 PTPN12Q05209 780 aaKnown RBP14.21□□□□□ -0.13
SH2D3A-206ENST00000597254 CCDC24Q8N4L8 307 aa14.21□□□□□ -0.13
SH2D3A-206ENST00000597254 COPRSQ9NQ92 184 aa14.21□□□□□ -0.13
SH2D3A-206ENST00000597254 RAB11FIP3O75154 756 aa14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 HSPA6P17066 643 aa14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 CCDC57Q2TAC2 916 aa14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 HSP90AB4PQ58FF6 505 aa14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 KLHDC4Q8TBB5 520 aa14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 CCDC85AQ96PX6 553 aaPredicted RBP14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 NMRK2Q9NPI5 230 aa14.2□□□□□ -0.14
SH2D3A-206ENST00000597254 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 DDX60Q8IY21 1712 aaKnown RBP14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 APBB1O00213 710 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 LMNB1P20700 586 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 RASSF7Q02833 373 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 G3BP1Q13283 466 aaKnown RBP eCLIP14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 IFIT5Q13325 482 aaKnown RBP14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 SF3B3Q15393 1217 aaKnown RBP14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 SKAP1Q86WV1 359 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 C16orf71Q8IYS4 520 aaPredicted RBP14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 NLRP3Q96P20 1036 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 GREM2Q9H772 168 aa14.19□□□□□ -0.14
SH2D3A-206ENST00000597254 SBF1O95248 1867 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 MYH3P11055 1940 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 ANKRD18BA2A2Z9 1011 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 SMARCA5O60264 1052 aaPredicted RBP14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 TOMM70O94826 608 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 ITGA6P23229 1130 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 CCDC152Q4G0S7 254 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 ZNF594Q96JF6 807 aaPredicted RBP14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 LNPKQ9C0E8 428 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 ABCC12Q96J65 1359 aa14.18□□□□□ -0.14
SH2D3A-206ENST00000597254 ANKRD31Q8N7Z5 1873 aa14.17□□□□□ -0.14
SH2D3A-206ENST00000597254 C3orf67Q6ZVT6 689 aa14.17□□□□□ -0.14
SH2D3A-206ENST00000597254 RHPN1Q8TCX5 695 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms