RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PDE8AO60658 829 aa26.89■■□□□ 1.9
PNKP-209ENST00000596726 MRPL50Q8N5N7 158 aaKnown RBP26.89■■□□□ 1.9
PNKP-209ENST00000596726 F6X3S4 739 aa26.88■■□□□ 1.89
PNKP-209ENST00000596726 H7C1W4 665 aa26.88■■□□□ 1.89
PNKP-209ENST00000596726 GCKRQ14397 625 aa26.88■■□□□ 1.89
PNKP-209ENST00000596726 SP8Q8IXZ3 490 aa26.88■■□□□ 1.89
PNKP-209ENST00000596726 COL4A1P02462 1669 aa26.87■■□□□ 1.89
PNKP-209ENST00000596726 ZNF277Q9NRM2 450 aaPredicted RBP26.87■■□□□ 1.89
PNKP-209ENST00000596726 LRRC37AA6NMS7 1700 aa26.86■■□□□ 1.89
PNKP-209ENST00000596726 KIF3CO14782 793 aa26.86■■□□□ 1.89
PNKP-209ENST00000596726 BEND3Q5T5X7 828 aa26.86■■□□□ 1.89
PNKP-209ENST00000596726 TMC4Q7Z404 712 aa26.86■■□□□ 1.89
PNKP-209ENST00000596726 SSH1Q8WYL5 1049 aa26.86■■□□□ 1.89
PNKP-209ENST00000596726 KDM2BQ8NHM5 1336 aa26.86■■□□□ 1.89
PNKP-209ENST00000596726 GLTPD2A6NH11 291 aa26.85■■□□□ 1.89
PNKP-209ENST00000596726 CT47B1P0C2W7 299 aaPredicted RBP26.85■■□□□ 1.89
PNKP-209ENST00000596726 CELF1Q92879 486 aaKnown RBP26.85■■□□□ 1.89
PNKP-209ENST00000596726 IARSP41252 1262 aaKnown RBP26.84■■□□□ 1.89
PNKP-209ENST00000596726 CASP7P55210 303 aa26.84■■□□□ 1.89
PNKP-209ENST00000596726 ALDH1L2Q3SY69 923 aa26.84■■□□□ 1.89
PNKP-209ENST00000596726 TMX4Q9H1E5 349 aaPredicted RBP26.84■■□□□ 1.89
PNKP-209ENST00000596726 NMRK2Q9NPI5 230 aa26.84■■□□□ 1.89
PNKP-209ENST00000596726 CCDC152Q4G0S7 254 aa26.83■■□□□ 1.89
PNKP-209ENST00000596726 UBE3BQ7Z3V4 1068 aa26.82■■□□□ 1.88
PNKP-209ENST00000596726 RTFDC1Q9BY42 306 aaPredicted RBP26.82■■□□□ 1.88
PNKP-209ENST00000596726 SEC31BQ9NQW1 1179 aa26.82■■□□□ 1.88
PNKP-209ENST00000596726 CTSWP56202 376 aa26.81■■□□□ 1.88
PNKP-209ENST00000596726 C1QTNF8P60827 252 aa26.81■■□□□ 1.88
PNKP-209ENST00000596726 RPS8P62241 208 aaKnown RBP26.81■■□□□ 1.88
PNKP-209ENST00000596726 HNRNPUQ00839 825 aaKnown RBP eCLIP26.81■■□□□ 1.88
PNKP-209ENST00000596726 TTLL11Q8NHH1 800 aa26.81■■□□□ 1.88
PNKP-209ENST00000596726 PLA2G12BQ9BX93 195 aa26.81■■□□□ 1.88
PNKP-209ENST00000596726 PTPRCP08575 1304 aa26.8■■□□□ 1.88
PNKP-209ENST00000596726 COL4A5P29400 1685 aa26.79■■□□□ 1.88
PNKP-209ENST00000596726 WDR90Q96KV7 1748 aa26.79■■□□□ 1.88
PNKP-209ENST00000596726 DPY19L2Q6NUT2 758 aa26.79■■□□□ 1.88
PNKP-209ENST00000596726 MPNDQ8N594 471 aa26.79■■□□□ 1.88
PNKP-209ENST00000596726 BCL2L13Q9BXK5 485 aa26.78■■□□□ 1.88
PNKP-209ENST00000596726 VPS33BQ9H267 617 aa26.78■■□□□ 1.88
PNKP-209ENST00000596726 RRAGCQ9HB90 399 aa26.78■■□□□ 1.88
PNKP-209ENST00000596726 RTL9Q8NET4 1388 aa26.78■■□□□ 1.88
PNKP-209ENST00000596726 FZD9O00144 591 aa26.77■■□□□ 1.88
PNKP-209ENST00000596726 ALDH1L1O75891 902 aa26.77■■□□□ 1.88
PNKP-209ENST00000596726 SLC4A10Q6U841 1118 aa26.77■■□□□ 1.88
PNKP-209ENST00000596726 DPP8Q6V1X1 898 aaPredicted RBP26.77■■□□□ 1.88
PNKP-209ENST00000596726 SUPT20HQ8NEM7 779 aa26.77■■□□□ 1.88
PNKP-209ENST00000596726 CCDC85AQ96PX6 553 aaPredicted RBP26.77■■□□□ 1.88
PNKP-209ENST00000596726 LTBP1Q14766 1721 aa26.76■■□□□ 1.88
PNKP-209ENST00000596726 DUOX1Q9NRD9 1551 aa26.76■■□□□ 1.87
PNKP-209ENST00000596726 CSF1RP07333 972 aa26.75■■□□□ 1.87
PNKP-209ENST00000596726 BRPF1P55201 1214 aaPredicted RBP26.75■■□□□ 1.87
PNKP-209ENST00000596726 SRCIN1Q9C0H9 1055 aa26.75■■□□□ 1.87
PNKP-209ENST00000596726 GREM2Q9H772 168 aa26.75■■□□□ 1.87
PNKP-209ENST00000596726 SMC4Q9NTJ3 1288 aa26.75■■□□□ 1.87
PNKP-209ENST00000596726 POTECB2RU33 542 aa26.74■■□□□ 1.87
PNKP-209ENST00000596726 DDNO94850 711 aaPredicted RBP26.74■■□□□ 1.87
PNKP-209ENST00000596726 LARGE2Q8N3Y3 721 aa26.74■■□□□ 1.87
PNKP-209ENST00000596726 JDP2Q8WYK2 163 aa26.74■■□□□ 1.87
PNKP-209ENST00000596726 ZNF541Q9H0D2 1346 aa26.73■■□□□ 1.87
PNKP-209ENST00000596726 GRM8O00222 908 aa26.73■■□□□ 1.87
PNKP-209ENST00000596726 PPIP5K2O43314 1243 aa26.72■■□□□ 1.87
PNKP-209ENST00000596726 TOMM70O94826 608 aa26.72■■□□□ 1.87
PNKP-209ENST00000596726 VEGFAP15692 232 aaPredicted RBP26.72■■□□□ 1.87
PNKP-209ENST00000596726 RARSP54136 660 aaKnown RBP26.72■■□□□ 1.87
PNKP-209ENST00000596726 GPSM2P81274 684 aa26.72■■□□□ 1.87
PNKP-209ENST00000596726 AOC3Q16853 763 aa26.72■■□□□ 1.87
PNKP-209ENST00000596726 ANKRD18AQ8IVF6 992 aa26.72■■□□□ 1.87
PNKP-209ENST00000596726 CDC5LQ99459 802 aaKnown RBP26.72■■□□□ 1.87
PNKP-209ENST00000596726 NSFL1CQ9UNZ2 370 aaKnown RBP26.72■■□□□ 1.87
PNKP-209ENST00000596726 SPEF2Q9C093 1822 aa26.72■■□□□ 1.87
PNKP-209ENST00000596726 FOXO4P98177 505 aa26.71■■□□□ 1.87
PNKP-209ENST00000596726 KIAA2012Q0VF49 1180 aa26.71■■□□□ 1.87
PNKP-209ENST00000596726 ZBED9Q6R2W3 1325 aa26.7■■□□□ 1.87
PNKP-209ENST00000596726 L3MBTL3Q96JM7 780 aaPredicted RBP26.7■■□□□ 1.86
PNKP-209ENST00000596726 PODXL2Q9NZ53 605 aa26.7■■□□□ 1.86
PNKP-209ENST00000596726 POLLQ9UGP5 575 aa26.7■■□□□ 1.86
PNKP-209ENST00000596726 UTYO14607 1347 aa26.69■■□□□ 1.86
PNKP-209ENST00000596726 NIM1KQ8IY84 436 aa26.69■■□□□ 1.86
PNKP-209ENST00000596726 C9orf78Q9NZ63 289 aaPredicted RBP26.69■■□□□ 1.86
PNKP-209ENST00000596726 SCN4AP35499 1836 aa26.69■■□□□ 1.86
PNKP-209ENST00000596726 FAM161AQ3B820 660 aa26.68■■□□□ 1.86
PNKP-209ENST00000596726 BSDC1Q9NW68 430 aaPredicted RBP26.68■■□□□ 1.86
PNKP-209ENST00000596726 NOB1Q9ULX3 412 aaKnown RBP26.68■■□□□ 1.86
PNKP-209ENST00000596726 ITGA6P23229 1130 aa26.67■■□□□ 1.86
PNKP-209ENST00000596726 EIF6P56537 245 aaKnown RBP26.67■■□□□ 1.86
PNKP-209ENST00000596726 EPHA10Q5JZY3 1008 aa26.67■■□□□ 1.86
PNKP-209ENST00000596726 C16orf71Q8IYS4 520 aaPredicted RBP26.67■■□□□ 1.86
PNKP-209ENST00000596726 TBC1D16Q8TBP0 767 aa26.67■■□□□ 1.86
PNKP-209ENST00000596726 RBM46Q8TBY0 533 aaKnown RBP26.67■■□□□ 1.86
PNKP-209ENST00000596726 GPC2Q8N158 579 aa26.66■■□□□ 1.86
PNKP-209ENST00000596726 C6orf229H3BNL8 230 aa26.65■■□□□ 1.86
PNKP-209ENST00000596726 NBPF7P0C2Y1 421 aaPredicted RBP26.65■■□□□ 1.86
PNKP-209ENST00000596726 KAZALD1Q96I82 304 aa26.65■■□□□ 1.86
PNKP-209ENST00000596726 ZNRF3Q9ULT6 936 aa26.65■■□□□ 1.86
PNKP-209ENST00000596726 WASHC4Q2M389 1173 aa26.64■■□□□ 1.86
PNKP-209ENST00000596726 MINPP1Q9UNW1 487 aa26.64■■□□□ 1.86
PNKP-209ENST00000596726 IGHMBP2P38935 993 aaKnown RBP26.63■■□□□ 1.85
PNKP-209ENST00000596726 LMBR1LQ6UX01 489 aa26.63■■□□□ 1.85
PNKP-209ENST00000596726 SUCLG2Q96I99 432 aa26.63■■□□□ 1.85
PNKP-209ENST00000596726 EYA3Q99504 573 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms