RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 GRAPQ13588 217 aa20.76■□□□□ 0.91
LINC02560-201ENST00000596379 ANKRD13DQ6ZTN6 518 aa20.76■□□□□ 0.91
LINC02560-201ENST00000596379 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
LINC02560-201ENST00000596379 GRAPLQ8TC17 118 aaPredicted RBP20.76■□□□□ 0.91
LINC02560-201ENST00000596379 WBP1LQ9NX94 342 aa20.76■□□□□ 0.91
LINC02560-201ENST00000596379 GPRC5DQ9NZD1 345 aa20.76■□□□□ 0.91
LINC02560-201ENST00000596379 WDR33Q9C0J8 1336 aaKnown RBP20.75■□□□□ 0.91
LINC02560-201ENST00000596379 HOXB7P09629 217 aa20.74■□□□□ 0.91
LINC02560-201ENST00000596379 CTCFP49711 727 aaPredicted RBP20.74■□□□□ 0.91
LINC02560-201ENST00000596379 KIAA2012Q0VF49 1180 aa20.74■□□□□ 0.91
LINC02560-201ENST00000596379 PRDM10Q9NQV6 1147 aa20.74■□□□□ 0.91
LINC02560-201ENST00000596379 ADARB2Q9NS39 739 aaKnown RBP20.74■□□□□ 0.91
LINC02560-201ENST00000596379 DBF4Q9UBU7 674 aaPredicted RBP20.74■□□□□ 0.91
LINC02560-201ENST00000596379 ATP5J2-PTCD1G3V325 749 aa20.73■□□□□ 0.91
LINC02560-201ENST00000596379 TRAF5O00463 557 aa20.73■□□□□ 0.91
LINC02560-201ENST00000596379 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
LINC02560-201ENST00000596379 CIAPIN1Q6FI81 312 aa20.73■□□□□ 0.91
LINC02560-201ENST00000596379 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
LINC02560-201ENST00000596379 CFAP44Q96MT7 982 aa20.73■□□□□ 0.91
LINC02560-201ENST00000596379 ISCA1Q9BUE6 129 aa20.73■□□□□ 0.91
LINC02560-201ENST00000596379 RAD17O75943 681 aa20.72■□□□□ 0.91
LINC02560-201ENST00000596379 DUSP27Q5VZP5 1158 aa20.72■□□□□ 0.91
LINC02560-201ENST00000596379 CST9Q5W186 159 aa20.72■□□□□ 0.91
LINC02560-201ENST00000596379 TRPM7Q96QT4 1865 aa20.72■□□□□ 0.91
LINC02560-201ENST00000596379 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
LINC02560-201ENST00000596379 TMC4Q7Z404 712 aa20.71■□□□□ 0.91
LINC02560-201ENST00000596379 BCL2L13Q9BXK5 485 aa20.71■□□□□ 0.91
LINC02560-201ENST00000596379 HYPKQ9NX55 129 aa20.71■□□□□ 0.91
LINC02560-201ENST00000596379 LBX1P52954 281 aa20.7■□□□□ 0.9
LINC02560-201ENST00000596379 TNIP1Q15025 636 aa20.7■□□□□ 0.9
LINC02560-201ENST00000596379 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
LINC02560-201ENST00000596379 PAXIP1Q6ZW49 1069 aaPredicted RBP20.7■□□□□ 0.9
LINC02560-201ENST00000596379 CELF1Q92879 486 aaKnown RBP20.7■□□□□ 0.9
LINC02560-201ENST00000596379 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
LINC02560-201ENST00000596379 YDJCA8MPS7 323 aa20.69■□□□□ 0.9
LINC02560-201ENST00000596379 MAP2K1Q02750 393 aaPredicted RBP20.69■□□□□ 0.9
LINC02560-201ENST00000596379 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
LINC02560-201ENST00000596379 CAPNS2Q96L46 248 aa20.69■□□□□ 0.9
LINC02560-201ENST00000596379 GRM1Q13255 1194 aa20.68■□□□□ 0.9
LINC02560-201ENST00000596379 PRKRIP1Q9H875 184 aaPredicted RBP20.68■□□□□ 0.9
LINC02560-201ENST00000596379 NSFL1CQ9UNZ2 370 aaKnown RBP20.68■□□□□ 0.9
LINC02560-201ENST00000596379 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
LINC02560-201ENST00000596379 HIRAP54198 1017 aaPredicted RBP20.67■□□□□ 0.9
LINC02560-201ENST00000596379 TRIM28Q13263 835 aaKnown RBP20.67■□□□□ 0.9
LINC02560-201ENST00000596379 CYP4F22Q6NT55 531 aa20.67■□□□□ 0.9
LINC02560-201ENST00000596379 PGAP2Q9UHJ9 254 aa20.67■□□□□ 0.9
LINC02560-201ENST00000596379 CNOT7Q9UIV1 285 aaKnown RBP20.67■□□□□ 0.9
LINC02560-201ENST00000596379 TLL2Q9Y6L7 1015 aa20.67■□□□□ 0.9
LINC02560-201ENST00000596379 DUOX1Q9NRD9 1551 aa20.67■□□□□ 0.9
LINC02560-201ENST00000596379 ELL2O00472 640 aaPredicted RBP20.66■□□□□ 0.9
LINC02560-201ENST00000596379 IRS4O14654 1257 aaPredicted RBP20.66■□□□□ 0.9
LINC02560-201ENST00000596379 APAF1O14727 1248 aa20.66■□□□□ 0.9
LINC02560-201ENST00000596379 RIMBP2O15034 1052 aa20.66■□□□□ 0.9
LINC02560-201ENST00000596379 HSPA8P11142 646 aaKnown RBP20.66■□□□□ 0.9
LINC02560-201ENST00000596379 ECE1P42892 770 aa20.66■□□□□ 0.9
LINC02560-201ENST00000596379 WASHC4Q2M389 1173 aa20.66■□□□□ 0.9
LINC02560-201ENST00000596379 GPR101Q96P66 508 aaPredicted RBP20.66■□□□□ 0.9
LINC02560-201ENST00000596379 GLIS2Q9BZE0 524 aaPredicted RBP20.66■□□□□ 0.9
LINC02560-201ENST00000596379 CDHR2Q9BYE9 1310 aa20.66■□□□□ 0.9
LINC02560-201ENST00000596379 LRRC37AA6NMS7 1700 aa20.66■□□□□ 0.9
LINC02560-201ENST00000596379 SHTN1A0MZ66 631 aa20.65■□□□□ 0.9
LINC02560-201ENST00000596379 CELF2O95319 508 aaKnown RBP20.65■□□□□ 0.9
LINC02560-201ENST00000596379 RIC3Q7Z5B4 369 aa20.65■□□□□ 0.9
LINC02560-201ENST00000596379 ZC3H15Q8WU90 426 aaKnown RBP20.65■□□□□ 0.9
LINC02560-201ENST00000596379 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
LINC02560-201ENST00000596379 POLLQ9UGP5 575 aa20.65■□□□□ 0.9
LINC02560-201ENST00000596379 C6orf229H3BNL8 230 aa20.64■□□□□ 0.89
LINC02560-201ENST00000596379 H7C1D1 291 aa20.64■□□□□ 0.89
LINC02560-201ENST00000596379 GPSM2P81274 684 aa20.64■□□□□ 0.89
LINC02560-201ENST00000596379 TRPM4Q8TD43 1214 aa20.64■□□□□ 0.89
LINC02560-201ENST00000596379 DBNDD1Q9H9R9 158 aa20.64■□□□□ 0.89
LINC02560-201ENST00000596379 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
LINC02560-201ENST00000596379 ZBTB12Q9Y330 459 aaPredicted RBP20.64■□□□□ 0.89
LINC02560-201ENST00000596379 COL4A1P02462 1669 aa20.64■□□□□ 0.89
LINC02560-201ENST00000596379 RPS8P62241 208 aaKnown RBP20.63■□□□□ 0.89
LINC02560-201ENST00000596379 GNAI1P63096 354 aa20.63■□□□□ 0.89
LINC02560-201ENST00000596379 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
LINC02560-201ENST00000596379 MICALL2Q8IY33 904 aa20.63■□□□□ 0.89
LINC02560-201ENST00000596379 PSMD14O00487 310 aa20.62■□□□□ 0.89
LINC02560-201ENST00000596379 CDC37L1Q7L3B6 337 aa20.62■□□□□ 0.89
LINC02560-201ENST00000596379 SAPCD2Q86UD0 394 aa20.62■□□□□ 0.89
LINC02560-201ENST00000596379 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
LINC02560-201ENST00000596379 DPF2Q92785 391 aa20.62■□□□□ 0.89
LINC02560-201ENST00000596379 AOC2O75106 756 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 CALD1Q05682 793 aaKnown RBP20.61■□□□□ 0.89
LINC02560-201ENST00000596379 DOK7Q18PE1 504 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 SAMD7Q7Z3H4 446 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 EYA3Q99504 573 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 MYD88Q99836 296 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 BEGAINQ9BUH8 593 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 ZNF408Q9H9D4 720 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 SEC31BQ9NQW1 1179 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 KCNQ5Q9NR82 932 aa20.61■□□□□ 0.89
LINC02560-201ENST00000596379 THSD7BQ9C0I4 1608 aa20.6■□□□□ 0.89
LINC02560-201ENST00000596379 USP48Q86UV5 1035 aa20.6■□□□□ 0.89
LINC02560-201ENST00000596379 C8orf58Q8NAV2 365 aa20.6■□□□□ 0.89
LINC02560-201ENST00000596379 TBC1D16Q8TBP0 767 aa20.6■□□□□ 0.89
LINC02560-201ENST00000596379 POLR2AP24928 1970 aaKnown RBP20.59■□□□□ 0.89
LINC02560-201ENST00000596379 ECE2O60344 883 aa20.59■□□□□ 0.89
LINC02560-201ENST00000596379 MAP2K2P36507 400 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms