RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	STK25	O00506	426 aa		11.53	□□□□□ -0.56
LINC00649-208	ENST00000596365	A1BG	P04217	495 aa		11.53	□□□□□ -0.56
LINC00649-208	ENST00000596365	GRIPAP1	Q4V328	841 aa		11.53	□□□□□ -0.56
LINC00649-208	ENST00000596365	SAGE1	Q9NXZ1	904 aa		11.53	□□□□□ -0.56
LINC00649-208	ENST00000596365	STK24	Q9Y6E0	443 aa		11.53	□□□□□ -0.56
LINC00649-208	ENST00000596365	ZNF790	Q6PG37	636 aa		11.52	□□□□□ -0.57
LINC00649-208	ENST00000596365	LARGE2	Q8N3Y3	721 aa		11.52	□□□□□ -0.57
LINC00649-208	ENST00000596365	NBPF15	Q8N660	670 aa		11.52	□□□□□ -0.57
LINC00649-208	ENST00000596365	MTHFSD	Q2M296	383 aa	Known RBP	11.51	□□□□□ -0.57
LINC00649-208	ENST00000596365	MORC1	Q86VD1	984 aa		11.51	□□□□□ -0.57
LINC00649-208	ENST00000596365	FMNL2	Q96PY5	1086 aa		11.51	□□□□□ -0.57
LINC00649-208	ENST00000596365	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.51	□□□□□ -0.57
LINC00649-208	ENST00000596365	ZNF408	Q9H9D4	720 aa		11.51	□□□□□ -0.57
LINC00649-208	ENST00000596365	GPRC5D	Q9NZD1	345 aa		11.51	□□□□□ -0.57
LINC00649-208	ENST00000596365	TEF	Q10587	303 aa		11.5	□□□□□ -0.57
LINC00649-208	ENST00000596365	NIM1K	Q8IY84	436 aa		11.5	□□□□□ -0.57
LINC00649-208	ENST00000596365	ZC3H15	Q8WU90	426 aa	Known RBP	11.5	□□□□□ -0.57
LINC00649-208	ENST00000596365	ZIC5	Q96T25	663 aa		11.5	□□□□□ -0.57
LINC00649-208	ENST00000596365	POLR3GL	Q9BT43	218 aa		11.5	□□□□□ -0.57
LINC00649-208	ENST00000596365	PGAP2	Q9UHJ9	254 aa		11.5	□□□□□ -0.57
LINC00649-208	ENST00000596365	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
LINC00649-208	ENST00000596365	HMOX1	P09601	288 aa		11.49	□□□□□ -0.57
LINC00649-208	ENST00000596365	GTF2E1	P29083	439 aa	Predicted RBP	11.49	□□□□□ -0.57
LINC00649-208	ENST00000596365	HUNK	P57058	714 aa		11.49	□□□□□ -0.57
LINC00649-208	ENST00000596365	CDC37L1	Q7L3B6	337 aa		11.49	□□□□□ -0.57
LINC00649-208	ENST00000596365	CTU1	Q7Z7A3	348 aa	Known RBP	11.49	□□□□□ -0.57
LINC00649-208	ENST00000596365	POLR2A	P24928	1970 aa	Known RBP	11.48	□□□□□ -0.57
LINC00649-208	ENST00000596365	FAM177B	A6PVY3	158 aa		11.48	□□□□□ -0.57
LINC00649-208	ENST00000596365	NPC1L1	Q9UHC9	1359 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	CDHR2	Q9BYE9	1310 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	PPIP5K2	O43314	1243 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	TRPA1	O75762	1119 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	CRY2	Q49AN0	593 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	RGMB	Q6NW40	437 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	RPGR	Q92834	1020 aa	Known RBP	11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	CCDC102A	Q96A19	550 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	VPS33B	Q9H267	617 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	PANK3	Q9H999	370 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	RNF186	Q9NXI6	227 aa		11.47	□□□□□ -0.57
LINC00649-208	ENST00000596365	FAM155A	B1AL88	458 aa	Predicted RBP	11.46	□□□□□ -0.57
LINC00649-208	ENST00000596365	GMPS	P49915	693 aa	Predicted RBP	11.46	□□□□□ -0.57
LINC00649-208	ENST00000596365	KIF23	Q02241	960 aa	Predicted RBP	11.46	□□□□□ -0.57
LINC00649-208	ENST00000596365	PKN2	Q16513	984 aa	Known RBP	11.46	□□□□□ -0.57
LINC00649-208	ENST00000596365	HABP4	Q5JVS0	413 aa	Known RBP	11.46	□□□□□ -0.57
LINC00649-208	ENST00000596365	NYX	Q9GZU5	481 aa		11.46	□□□□□ -0.57
LINC00649-208	ENST00000596365	HPS5	Q9UPZ3	1129 aa		11.46	□□□□□ -0.57
LINC00649-208	ENST00000596365	NUP98	P52948	1817 aa		11.46	□□□□□ -0.58
LINC00649-208	ENST00000596365	KIF7	Q2M1P5	1343 aa		11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	GNAT3	A8MTJ3	354 aa		11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	HOXA10	P31260	410 aa	Predicted RBP	11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	PIP4K2A	P48426	406 aa	Predicted RBP	11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	CXCL9	Q07325	125 aa		11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	IL17RE	Q8NFR9	667 aa		11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	TMX4	Q9H1E5	349 aa	Predicted RBP	11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	ZNRF3	Q9ULT6	936 aa		11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	USP16	Q9Y5T5	823 aa		11.45	□□□□□ -0.58
LINC00649-208	ENST00000596365	PPEF1	O14829	653 aa	Predicted RBP	11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	ZNF157	P51786	506 aa	Predicted RBP	11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	HIRA	P54198	1017 aa	Predicted RBP	11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	AOC3	Q16853	763 aa		11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	USP48	Q86UV5	1035 aa		11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	C2orf69	Q8N8R5	385 aa		11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	RBM17	Q96I25	401 aa	Known RBP	11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	CRAMP1	Q96RY5	1269 aa		11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	BCL2L13	Q9BXK5	485 aa		11.44	□□□□□ -0.58
LINC00649-208	ENST00000596365	RIC1	Q4ADV7	1423 aa		11.43	□□□□□ -0.58
LINC00649-208	ENST00000596365	ABCC12	Q96J65	1359 aa		11.43	□□□□□ -0.58
LINC00649-208	ENST00000596365	BTBD11	A6QL63	1104 aa		11.43	□□□□□ -0.58
LINC00649-208	ENST00000596365	TNIP1	Q15025	636 aa		11.43	□□□□□ -0.58
LINC00649-208	ENST00000596365	SUPT20H	Q8NEM7	779 aa		11.43	□□□□□ -0.58
LINC00649-208	ENST00000596365	GAS2L2	Q8NHY3	880 aa		11.43	□□□□□ -0.58
LINC00649-208	ENST00000596365	GBA2	Q9HCG7	927 aa	Predicted RBP	11.43	□□□□□ -0.58
LINC00649-208	ENST00000596365		H7C1D1	291 aa		11.42	□□□□□ -0.58
LINC00649-208	ENST00000596365	TCERG1	O14776	1098 aa	Known RBP	11.42	□□□□□ -0.58
LINC00649-208	ENST00000596365	KCNQ3	O43525	872 aa		11.42	□□□□□ -0.58
LINC00649-208	ENST00000596365	SNRPA1	P09661	255 aa	Known RBP	11.42	□□□□□ -0.58
LINC00649-208	ENST00000596365	NUTM1	Q86Y26	1132 aa		11.42	□□□□□ -0.58
LINC00649-208	ENST00000596365	TRPM4	Q8TD43	1214 aa		11.42	□□□□□ -0.58
LINC00649-208	ENST00000596365	CNOT7	Q9UIV1	285 aa	Known RBP	11.42	□□□□□ -0.58
LINC00649-208	ENST00000596365	MKI67	P46013	3256 aa	Known RBP	11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	DIAPH1	O60610	1272 aa	Known RBP	11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	SLC10A3	P09131	477 aa		11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	HLF	Q16534	295 aa		11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	MS4A4A	Q96JQ5	239 aa		11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	CSRNP1	Q96S65	589 aa		11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	HDAC9	Q9UKV0	1011 aa		11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	KNSTRN	Q9Y448	316 aa		11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	CEMIP	Q8WUJ3	1361 aa		11.41	□□□□□ -0.58
LINC00649-208	ENST00000596365	PRAMEF22	A3QJZ6	481 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	NBPF26	B4DH59	902 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	RAD17	O75943	681 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	NBPF10	Q6P3W6	841 aa	Known RBP	11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	KRT26	Q7Z3Y9	468 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	HS6ST3	Q8IZP7	471 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	SLAIN1	Q8ND83	568 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	MFRP	Q9BY79	579 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	BOLA1	Q9Y3E2	137 aa		11.4	□□□□□ -0.58
LINC00649-208	ENST00000596365	ATP6V0A2	Q9Y487	856 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms