RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 C9orf131Q5VYM1 1079 aa19.02■□□□□ 0.64
SCN1B-204ENST00000596348 BCAR3O75815 825 aa19.01■□□□□ 0.63
SCN1B-204ENST00000596348 ALDH1L1O75891 902 aa19.01■□□□□ 0.63
SCN1B-204ENST00000596348 HSP90B1P14625 803 aaKnown RBP19.01■□□□□ 0.63
SCN1B-204ENST00000596348 CTSWP56202 376 aa19.01■□□□□ 0.63
SCN1B-204ENST00000596348 GRAPQ13588 217 aa19.01■□□□□ 0.63
SCN1B-204ENST00000596348 GRAPLQ8TC17 118 aaPredicted RBP19.01■□□□□ 0.63
SCN1B-204ENST00000596348 SRCIN1Q9C0H9 1055 aa19.01■□□□□ 0.63
SCN1B-204ENST00000596348 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
SCN1B-204ENST00000596348 CELF1Q92879 486 aaKnown RBP19■□□□□ 0.63
SCN1B-204ENST00000596348 CCDC85AQ96PX6 553 aaPredicted RBP19■□□□□ 0.63
SCN1B-204ENST00000596348 TAOK3Q9H2K8 898 aa19■□□□□ 0.63
SCN1B-204ENST00000596348 SEC31BQ9NQW1 1179 aa19■□□□□ 0.63
SCN1B-204ENST00000596348 RNF181Q9P0P0 153 aa19■□□□□ 0.63
SCN1B-204ENST00000596348 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
SCN1B-204ENST00000596348 GRM8O00222 908 aa18.99■□□□□ 0.63
SCN1B-204ENST00000596348 BBOX1O75936 387 aa18.99■□□□□ 0.63
SCN1B-204ENST00000596348 LMNB1P20700 586 aa18.99■□□□□ 0.63
SCN1B-204ENST00000596348 TTLL11Q8NHH1 800 aa18.99■□□□□ 0.63
SCN1B-204ENST00000596348 PLA2G12BQ9BX93 195 aa18.99■□□□□ 0.63
SCN1B-204ENST00000596348 ATP6V0A2Q9Y487 856 aa18.99■□□□□ 0.63
SCN1B-204ENST00000596348 DICER1Q9UPY3 1922 aaKnown RBP18.99■□□□□ 0.63
SCN1B-204ENST00000596348 KIF16BQ96L93 1317 aa18.99■□□□□ 0.63
SCN1B-204ENST00000596348 TIAM2Q8IVF5 1701 aa18.98■□□□□ 0.63
SCN1B-204ENST00000596348 CCDC152Q4G0S7 254 aa18.98■□□□□ 0.63
SCN1B-204ENST00000596348 RTKN2Q8IZC4 609 aa18.98■□□□□ 0.63
SCN1B-204ENST00000596348 ZNF784Q8NCA9 323 aaPredicted RBP18.98■□□□□ 0.63
SCN1B-204ENST00000596348 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
SCN1B-204ENST00000596348 CC2D2BQ6DHV5 1058 aa18.97■□□□□ 0.63
SCN1B-204ENST00000596348 GREM2Q9H772 168 aa18.97■□□□□ 0.63
SCN1B-204ENST00000596348 RTL9Q8NET4 1388 aa18.96■□□□□ 0.63
SCN1B-204ENST00000596348 NBPF7P0C2Y1 421 aaPredicted RBP18.96■□□□□ 0.63
SCN1B-204ENST00000596348 FOXO4P98177 505 aa18.96■□□□□ 0.63
SCN1B-204ENST00000596348 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
SCN1B-204ENST00000596348 SP8Q8IXZ3 490 aa18.96■□□□□ 0.63
SCN1B-204ENST00000596348 API5Q9BZZ5 524 aaKnown RBP18.96■□□□□ 0.63
SCN1B-204ENST00000596348 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
SCN1B-204ENST00000596348 C9orf78Q9NZ63 289 aaPredicted RBP18.96■□□□□ 0.63
SCN1B-204ENST00000596348 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
SCN1B-204ENST00000596348 UTYO14607 1347 aa18.96■□□□□ 0.63
SCN1B-204ENST00000596348 SPEF2Q9C093 1822 aa18.95■□□□□ 0.62
SCN1B-204ENST00000596348 DUOX1Q9NRD9 1551 aa18.95■□□□□ 0.62
SCN1B-204ENST00000596348 CSF1RP07333 972 aa18.95■□□□□ 0.62
SCN1B-204ENST00000596348 RPS8P62241 208 aaKnown RBP18.95■□□□□ 0.62
SCN1B-204ENST00000596348 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
SCN1B-204ENST00000596348 PSMD1Q99460 953 aa18.95■□□□□ 0.62
SCN1B-204ENST00000596348 TRIM27P14373 513 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 TMC4Q7Z404 712 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
SCN1B-204ENST00000596348 KAZALD1Q96I82 304 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 SUCLG2Q96I99 432 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 USP44Q9H0E7 712 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 COL4A5P29400 1685 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 LTBP1Q14766 1721 aa18.94■□□□□ 0.62
SCN1B-204ENST00000596348 CCT4P50991 539 aaKnown RBP18.92■□□□□ 0.62
SCN1B-204ENST00000596348 GRIPAP1Q4V328 841 aa18.92■□□□□ 0.62
SCN1B-204ENST00000596348 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
SCN1B-204ENST00000596348 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
SCN1B-204ENST00000596348 ITGA6P23229 1130 aa18.91■□□□□ 0.62
SCN1B-204ENST00000596348 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
SCN1B-204ENST00000596348 LMBR1LQ6UX01 489 aa18.91■□□□□ 0.62
SCN1B-204ENST00000596348 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
SCN1B-204ENST00000596348 MPNDQ8N594 471 aa18.91■□□□□ 0.62
SCN1B-204ENST00000596348 ZNF526Q8TF50 670 aaPredicted RBP18.91■□□□□ 0.62
SCN1B-204ENST00000596348 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
SCN1B-204ENST00000596348 RTFDC1Q9BY42 306 aaPredicted RBP18.91■□□□□ 0.62
SCN1B-204ENST00000596348 GPSM2P81274 684 aa18.9■□□□□ 0.62
SCN1B-204ENST00000596348 INTS3Q68E01 1043 aaKnown RBP18.9■□□□□ 0.62
SCN1B-204ENST00000596348 DPP8Q6V1X1 898 aaPredicted RBP18.9■□□□□ 0.62
SCN1B-204ENST00000596348 CDC5LQ99459 802 aaKnown RBP18.9■□□□□ 0.62
SCN1B-204ENST00000596348 TMX4Q9H1E5 349 aaPredicted RBP18.9■□□□□ 0.62
SCN1B-204ENST00000596348 ZC3H4Q9UPT8 1303 aaKnown RBP18.9■□□□□ 0.62
SCN1B-204ENST00000596348 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
SCN1B-204ENST00000596348 CLUAP1Q96AJ1 413 aa18.89■□□□□ 0.61
SCN1B-204ENST00000596348 ANKRD44Q8N8A2 993 aa18.88■□□□□ 0.61
SCN1B-204ENST00000596348 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
SCN1B-204ENST00000596348 NSFL1CQ9UNZ2 370 aaKnown RBP18.88■□□□□ 0.61
SCN1B-204ENST00000596348 CHMP3Q9Y3E7 222 aa18.88■□□□□ 0.61
SCN1B-204ENST00000596348 AOC3Q16853 763 aa18.87■□□□□ 0.61
SCN1B-204ENST00000596348 RABL6Q3YEC7 729 aaPredicted RBP18.87■□□□□ 0.61
SCN1B-204ENST00000596348 MEIS3Q99687 375 aa18.87■□□□□ 0.61
SCN1B-204ENST00000596348 BSDC1Q9NW68 430 aaPredicted RBP18.87■□□□□ 0.61
SCN1B-204ENST00000596348 POLLQ9UGP5 575 aa18.87■□□□□ 0.61
SCN1B-204ENST00000596348 ANKRD18BA2A2Z9 1011 aa18.86■□□□□ 0.61
SCN1B-204ENST00000596348 IFIT5Q13325 482 aaKnown RBP18.86■□□□□ 0.61
SCN1B-204ENST00000596348 PODXL2Q9NZ53 605 aa18.86■□□□□ 0.61
SCN1B-204ENST00000596348 ZNF541Q9H0D2 1346 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 PPIP5K2O43314 1243 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 RLBP1P12271 317 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 IGHMBP2P38935 993 aaKnown RBP18.85■□□□□ 0.61
SCN1B-204ENST00000596348 LARGE2Q8N3Y3 721 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 TMEM57Q8N5G2 664 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 SUPT20HQ8NEM7 779 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 TBC1D16Q8TBP0 767 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 ZNF594Q96JF6 807 aaPredicted RBP18.85■□□□□ 0.61
SCN1B-204ENST00000596348 GPR101Q96P66 508 aaPredicted RBP18.85■□□□□ 0.61
SCN1B-204ENST00000596348 GPBP1L1Q9HC44 474 aaPredicted RBP18.85■□□□□ 0.61
SCN1B-204ENST00000596348 RCAN3Q9UKA8 241 aa18.85■□□□□ 0.61
SCN1B-204ENST00000596348 MINPP1Q9UNW1 487 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms