RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
USE1-207ENST00000596136 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
USE1-207ENST00000596136 VPS33BQ9H267 617 aa16.72■□□□□ 0.27
USE1-207ENST00000596136 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
USE1-207ENST00000596136 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.27
USE1-207ENST00000596136 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
USE1-207ENST00000596136 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
USE1-207ENST00000596136 E9PSI1 815 aa16.7■□□□□ 0.26
USE1-207ENST00000596136 PDE8AO60658 829 aa16.7■□□□□ 0.26
USE1-207ENST00000596136 TMX4Q9H1E5 349 aaPredicted RBP16.7■□□□□ 0.26
USE1-207ENST00000596136 CEP350Q5VT06 3117 aa16.69■□□□□ 0.26
USE1-207ENST00000596136 H7C1W4 665 aa16.69■□□□□ 0.26
USE1-207ENST00000596136 DDNO94850 711 aaPredicted RBP16.69■□□□□ 0.26
USE1-207ENST00000596136 SLFN5Q08AF3 891 aa16.69■□□□□ 0.26
USE1-207ENST00000596136 FKBP5Q13451 457 aaPredicted RBP16.69■□□□□ 0.26
USE1-207ENST00000596136 DNAAF4Q8WXU2 420 aa16.69■□□□□ 0.26
USE1-207ENST00000596136 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
USE1-207ENST00000596136 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
USE1-207ENST00000596136 LRRC37AA6NMS7 1700 aa16.69■□□□□ 0.26
USE1-207ENST00000596136 COL4A5P29400 1685 aa16.69■□□□□ 0.26
USE1-207ENST00000596136 HSPA6P17066 643 aa16.68■□□□□ 0.26
USE1-207ENST00000596136 CWF19L2Q2TBE0 894 aaKnown RBP16.68■□□□□ 0.26
USE1-207ENST00000596136 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
USE1-207ENST00000596136 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
USE1-207ENST00000596136 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
USE1-207ENST00000596136 LINS1Q8NG48 757 aa16.68■□□□□ 0.26
USE1-207ENST00000596136 COL4A1P02462 1669 aa16.67■□□□□ 0.26
USE1-207ENST00000596136 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
USE1-207ENST00000596136 FSTL1Q12841 308 aa16.67■□□□□ 0.26
USE1-207ENST00000596136 GCKRQ14397 625 aa16.67■□□□□ 0.26
USE1-207ENST00000596136 CCDC152Q4G0S7 254 aa16.67■□□□□ 0.26
USE1-207ENST00000596136 MPNDQ8N594 471 aa16.67■□□□□ 0.26
USE1-207ENST00000596136 JDP2Q8WYK2 163 aa16.67■□□□□ 0.26
USE1-207ENST00000596136 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
USE1-207ENST00000596136 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
USE1-207ENST00000596136 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
USE1-207ENST00000596136 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
USE1-207ENST00000596136 SCN4AP35499 1836 aa16.66■□□□□ 0.26
USE1-207ENST00000596136 MYH3P11055 1940 aa16.65■□□□□ 0.26
USE1-207ENST00000596136 CASP7P55210 303 aa16.65■□□□□ 0.26
USE1-207ENST00000596136 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
USE1-207ENST00000596136 GPC2Q8N158 579 aa16.65■□□□□ 0.26
USE1-207ENST00000596136 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
USE1-207ENST00000596136 PLA2G12BQ9BX93 195 aa16.65■□□□□ 0.26
USE1-207ENST00000596136 SEC31BQ9NQW1 1179 aa16.65■□□□□ 0.26
USE1-207ENST00000596136 RTL9Q8NET4 1388 aa16.64■□□□□ 0.26
USE1-207ENST00000596136 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
USE1-207ENST00000596136 PPIP5K2O43314 1243 aa16.64■□□□□ 0.25
USE1-207ENST00000596136 CTSWP56202 376 aa16.64■□□□□ 0.25
USE1-207ENST00000596136 KIAA2012Q0VF49 1180 aa16.64■□□□□ 0.25
USE1-207ENST00000596136 BEND3Q5T5X7 828 aa16.64■□□□□ 0.25
USE1-207ENST00000596136 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
USE1-207ENST00000596136 LTBP1Q14766 1721 aa16.63■□□□□ 0.25
USE1-207ENST00000596136 IQCA1LA6NCM1 817 aa16.63■□□□□ 0.25
USE1-207ENST00000596136 F6X3S4 739 aa16.63■□□□□ 0.25
USE1-207ENST00000596136 AOC3Q16853 763 aa16.63■□□□□ 0.25
USE1-207ENST00000596136 MIER1Q8N108 512 aa16.63■□□□□ 0.25
USE1-207ENST00000596136 SMC1BQ8NDV3 1235 aa16.63■□□□□ 0.25
USE1-207ENST00000596136 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
USE1-207ENST00000596136 CSF1RP07333 972 aa16.62■□□□□ 0.25
USE1-207ENST00000596136 EIF6P56537 245 aaKnown RBP16.62■□□□□ 0.25
USE1-207ENST00000596136 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
USE1-207ENST00000596136 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
USE1-207ENST00000596136 MRPL50Q8N5N7 158 aaKnown RBP16.62■□□□□ 0.25
USE1-207ENST00000596136 ZNRF3Q9ULT6 936 aa16.62■□□□□ 0.25
USE1-207ENST00000596136 GPSM2P81274 684 aa16.61■□□□□ 0.25
USE1-207ENST00000596136 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
USE1-207ENST00000596136 POLLQ9UGP5 575 aa16.61■□□□□ 0.25
USE1-207ENST00000596136 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
USE1-207ENST00000596136 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
USE1-207ENST00000596136 APLP1P51693 650 aa16.6■□□□□ 0.25
USE1-207ENST00000596136 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
USE1-207ENST00000596136 CDC5LQ99459 802 aaKnown RBP16.6■□□□□ 0.25
USE1-207ENST00000596136 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
USE1-207ENST00000596136 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
USE1-207ENST00000596136 CXCL9Q07325 125 aa16.59■□□□□ 0.25
USE1-207ENST00000596136 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
USE1-207ENST00000596136 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
USE1-207ENST00000596136 ANKRD18AQ8IVF6 992 aa16.59■□□□□ 0.25
USE1-207ENST00000596136 TBC1D16Q8TBP0 767 aa16.59■□□□□ 0.25
USE1-207ENST00000596136 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
USE1-207ENST00000596136 GREM2Q9H772 168 aa16.59■□□□□ 0.25
USE1-207ENST00000596136 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
USE1-207ENST00000596136 PTPRCP08575 1304 aa16.58■□□□□ 0.24
USE1-207ENST00000596136 YDJCA8MPS7 323 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 POTEIP0CG38 1075 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 EPHX2P34913 555 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 SCNN1DP51172 638 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 FOXO4P98177 505 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 LDHDQ86WU2 507 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 EYA3Q99504 573 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 GJA3Q9Y6H8 435 aa16.57■□□□□ 0.24
USE1-207ENST00000596136 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
USE1-207ENST00000596136 C6orf229H3BNL8 230 aa16.56■□□□□ 0.24
USE1-207ENST00000596136 GRM8O00222 908 aa16.56■□□□□ 0.24
USE1-207ENST00000596136 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
USE1-207ENST00000596136 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms