RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 MAP2K1Q02750 393 aaPredicted RBP20.71■□□□□ 0.91
USHBP1-205ENST00000595993 FMR1Q06787 632 aaKnown RBP eCLIP20.71■□□□□ 0.91
USHBP1-205ENST00000595993 CXCL9Q07325 125 aa20.71■□□□□ 0.91
USHBP1-205ENST00000595993 CST9Q5W186 159 aa20.71■□□□□ 0.91
USHBP1-205ENST00000595993 COPS6Q7L5N1 327 aa20.71■□□□□ 0.91
USHBP1-205ENST00000595993 ADARB2Q9NS39 739 aaKnown RBP20.71■□□□□ 0.91
USHBP1-205ENST00000595993 ABT1Q9ULW3 272 aaKnown RBP20.71■□□□□ 0.91
USHBP1-205ENST00000595993 CDHR2Q9BYE9 1310 aa20.71■□□□□ 0.91
USHBP1-205ENST00000595993 LBX1P52954 281 aa20.7■□□□□ 0.9
USHBP1-205ENST00000595993 TCIRG1Q13488 830 aa20.7■□□□□ 0.9
USHBP1-205ENST00000595993 MIER1Q8N108 512 aa20.7■□□□□ 0.9
USHBP1-205ENST00000595993 PGAP2Q9UHJ9 254 aa20.7■□□□□ 0.9
USHBP1-205ENST00000595993 LAS1LQ9Y4W2 734 aaKnown RBP20.7■□□□□ 0.9
USHBP1-205ENST00000595993 KIAA2012Q0VF49 1180 aa20.69■□□□□ 0.9
USHBP1-205ENST00000595993 XAGE3Q8WTP9 111 aa20.69■□□□□ 0.9
USHBP1-205ENST00000595993 TMX4Q9H1E5 349 aaPredicted RBP20.69■□□□□ 0.9
USHBP1-205ENST00000595993 TAF1P21675 1872 aa20.69■□□□□ 0.9
USHBP1-205ENST00000595993 TRAF5O00463 557 aa20.68■□□□□ 0.9
USHBP1-205ENST00000595993 HCLS1P14317 486 aaPredicted RBP20.68■□□□□ 0.9
USHBP1-205ENST00000595993 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
USHBP1-205ENST00000595993 TLL2Q9Y6L7 1015 aa20.68■□□□□ 0.9
USHBP1-205ENST00000595993 SH3TC1Q8TE82 1336 aa20.68■□□□□ 0.9
USHBP1-205ENST00000595993 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
USHBP1-205ENST00000595993 GRAPQ13588 217 aa20.67■□□□□ 0.9
USHBP1-205ENST00000595993 CCDC27Q2M243 656 aa20.67■□□□□ 0.9
USHBP1-205ENST00000595993 MPNDQ8N594 471 aa20.67■□□□□ 0.9
USHBP1-205ENST00000595993 GRAPLQ8TC17 118 aaPredicted RBP20.67■□□□□ 0.9
USHBP1-205ENST00000595993 CAPNS2Q96L46 248 aa20.67■□□□□ 0.9
USHBP1-205ENST00000595993 CFAP44Q96MT7 982 aa20.67■□□□□ 0.9
USHBP1-205ENST00000595993 ECE1P42892 770 aa20.66■□□□□ 0.9
USHBP1-205ENST00000595993 GMPSP49915 693 aaPredicted RBP20.66■□□□□ 0.9
USHBP1-205ENST00000595993 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
USHBP1-205ENST00000595993 TMC4Q7Z404 712 aa20.66■□□□□ 0.9
USHBP1-205ENST00000595993 WWC1Q8IX03 1113 aa20.66■□□□□ 0.9
USHBP1-205ENST00000595993 MBIPQ9NS73 344 aa20.66■□□□□ 0.9
USHBP1-205ENST00000595993 TRMT112Q9UI30 125 aaKnown RBP20.66■□□□□ 0.9
USHBP1-205ENST00000595993 AIMP1Q12904 312 aaKnown RBP20.65■□□□□ 0.9
USHBP1-205ENST00000595993 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
USHBP1-205ENST00000595993 SALL2Q9Y467 1007 aaPredicted RBP20.65■□□□□ 0.9
USHBP1-205ENST00000595993 HOXB7P09629 217 aa20.64■□□□□ 0.89
USHBP1-205ENST00000595993 NCBP3Q53F19 620 aaKnown RBP20.64■□□□□ 0.89
USHBP1-205ENST00000595993 CIAPIN1Q6FI81 312 aa20.64■□□□□ 0.89
USHBP1-205ENST00000595993 CYP4F22Q6NT55 531 aa20.64■□□□□ 0.89
USHBP1-205ENST00000595993 ZC3H15Q8WU90 426 aaKnown RBP20.64■□□□□ 0.89
USHBP1-205ENST00000595993 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
USHBP1-205ENST00000595993 HHIPL1Q96JK4 782 aa20.64■□□□□ 0.89
USHBP1-205ENST00000595993 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
USHBP1-205ENST00000595993 YDJCA8MPS7 323 aa20.63■□□□□ 0.89
USHBP1-205ENST00000595993 CALD1Q05682 793 aaKnown RBP20.63■□□□□ 0.89
USHBP1-205ENST00000595993 SAPCD2Q86UD0 394 aa20.63■□□□□ 0.89
USHBP1-205ENST00000595993 GPR101Q96P66 508 aaPredicted RBP20.63■□□□□ 0.89
USHBP1-205ENST00000595993 ISCA1Q9BUE6 129 aa20.63■□□□□ 0.89
USHBP1-205ENST00000595993 CHPF2Q9P2E5 772 aa20.63■□□□□ 0.89
USHBP1-205ENST00000595993 COL4A1P02462 1669 aa20.63■□□□□ 0.89
USHBP1-205ENST00000595993 MAP2K2P36507 400 aa20.62■□□□□ 0.89
USHBP1-205ENST00000595993 HIRAP54198 1017 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-205ENST00000595993 GNAI1P63096 354 aa20.62■□□□□ 0.89
USHBP1-205ENST00000595993 TNIP1Q15025 636 aa20.62■□□□□ 0.89
USHBP1-205ENST00000595993 PLBD2Q8NHP8 589 aa20.62■□□□□ 0.89
USHBP1-205ENST00000595993 RAD17O75943 681 aa20.61■□□□□ 0.89
USHBP1-205ENST00000595993 SF3B3Q15393 1217 aaKnown RBP20.61■□□□□ 0.89
USHBP1-205ENST00000595993 GLIS2Q9BZE0 524 aaPredicted RBP20.6■□□□□ 0.89
USHBP1-205ENST00000595993 CELF2O95319 508 aaKnown RBP20.59■□□□□ 0.89
USHBP1-205ENST00000595993 TRIM28Q13263 835 aaKnown RBP20.59■□□□□ 0.89
USHBP1-205ENST00000595993 HDGFL1Q5TGJ6 251 aa20.59■□□□□ 0.89
USHBP1-205ENST00000595993 ANKRD13DQ6ZTN6 518 aa20.59■□□□□ 0.89
USHBP1-205ENST00000595993 TRPM4Q8TD43 1214 aa20.59■□□□□ 0.89
USHBP1-205ENST00000595993 ABHD8Q96I13 439 aa20.59■□□□□ 0.89
USHBP1-205ENST00000595993 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
USHBP1-205ENST00000595993 DPF2Q92785 391 aa20.58■□□□□ 0.89
USHBP1-205ENST00000595993 CELF1Q92879 486 aaKnown RBP20.58■□□□□ 0.89
USHBP1-205ENST00000595993 TSR2Q969E8 191 aaKnown RBP20.58■□□□□ 0.89
USHBP1-205ENST00000595993 BCL2L13Q9BXK5 485 aa20.58■□□□□ 0.89
USHBP1-205ENST00000595993 CNOT7Q9UIV1 285 aaKnown RBP20.58■□□□□ 0.89
USHBP1-205ENST00000595993 IL16Q14005 1332 aa20.57■□□□□ 0.88
USHBP1-205ENST00000595993 SHTN1A0MZ66 631 aa20.57■□□□□ 0.88
USHBP1-205ENST00000595993 AOC2O75106 756 aa20.57■□□□□ 0.88
USHBP1-205ENST00000595993 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
USHBP1-205ENST00000595993 CDC37L1Q7L3B6 337 aa20.57■□□□□ 0.88
USHBP1-205ENST00000595993 FAM89AQ96GI7 184 aa20.57■□□□□ 0.88
USHBP1-205ENST00000595993 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
USHBP1-205ENST00000595993 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
USHBP1-205ENST00000595993 BEGAINQ9BUH8 593 aa20.56■□□□□ 0.88
USHBP1-205ENST00000595993 HYPKQ9NX55 129 aa20.56■□□□□ 0.88
USHBP1-205ENST00000595993 CA12O43570 354 aa20.55■□□□□ 0.88
USHBP1-205ENST00000595993 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
USHBP1-205ENST00000595993 DUSP27Q5VZP5 1158 aa20.55■□□□□ 0.88
USHBP1-205ENST00000595993 WDR63Q8IWG1 891 aa20.55■□□□□ 0.88
USHBP1-205ENST00000595993 MICALL2Q8IY33 904 aa20.55■□□□□ 0.88
USHBP1-205ENST00000595993 C8orf58Q8NAV2 365 aa20.55■□□□□ 0.88
USHBP1-205ENST00000595993 SPINK5Q9NQ38 1064 aaPredicted RBP20.55■□□□□ 0.88
USHBP1-205ENST00000595993 ATP5J2-PTCD1G3V325 749 aa20.54■□□□□ 0.88
USHBP1-205ENST00000595993 H7C1D1 291 aa20.54■□□□□ 0.88
USHBP1-205ENST00000595993 POLLQ9UGP5 575 aa20.54■□□□□ 0.88
USHBP1-205ENST00000595993 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
USHBP1-205ENST00000595993 PSMD14O00487 310 aa20.53■□□□□ 0.88
USHBP1-205ENST00000595993 GPSM2P81274 684 aa20.53■□□□□ 0.88
USHBP1-205ENST00000595993 GRM1Q13255 1194 aa20.53■□□□□ 0.88
USHBP1-205ENST00000595993 NSFL1CQ9UNZ2 370 aaKnown RBP20.53■□□□□ 0.88
USHBP1-205ENST00000595993 ZBTB12Q9Y330 459 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms