RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 KCNF1Q9H3M0 494 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 LRP10Q7Z4F1 713 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 KCNB2Q92953 911 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 PRDM11Q9NQV5 511 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 STRCP1A6NGW2 1772 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 LIG1P18858 919 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
ZNF541-205ENST00000595558 LARP1BQ659C4 914 aaKnown RBP18.25■□□□□ 0.51
ZNF541-205ENST00000595558 PYCARDQ9ULZ3 195 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 NCAPD2Q15021 1401 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 NBPF26B4DH59 902 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 DDX58O95786 925 aaKnown RBP18.25■□□□□ 0.51
ZNF541-205ENST00000595558 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 NBPF10Q6P3W6 841 aaKnown RBP18.25■□□□□ 0.51
ZNF541-205ENST00000595558 NBPF15Q8N660 670 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 MYRIPQ8NFW9 859 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 EVI5LQ96CN4 794 aa18.25■□□□□ 0.51
ZNF541-205ENST00000595558 SLC27A2O14975 620 aa18.24■□□□□ 0.51
ZNF541-205ENST00000595558 TM6SF1Q9BZW5 370 aa18.24■□□□□ 0.51
ZNF541-205ENST00000595558 STK3Q13188 491 aa18.24■□□□□ 0.51
ZNF541-205ENST00000595558 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
ZNF541-205ENST00000595558 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
ZNF541-205ENST00000595558 SH2B1Q9NRF2 756 aaPredicted RBP18.24■□□□□ 0.51
ZNF541-205ENST00000595558 TFIP11Q9UBB9 837 aaKnown RBP18.24■□□□□ 0.51
ZNF541-205ENST00000595558 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
ZNF541-205ENST00000595558 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
ZNF541-205ENST00000595558 CADPS2Q86UW7 1296 aa18.23■□□□□ 0.51
ZNF541-205ENST00000595558 ZSCAN31Q96LW9 406 aaPredicted RBP18.23■□□□□ 0.51
ZNF541-205ENST00000595558 ZBTB3Q9H5J0 574 aa18.23■□□□□ 0.51
ZNF541-205ENST00000595558 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
ZNF541-205ENST00000595558 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
ZNF541-205ENST00000595558 LARP1Q6PKG0 1096 aaKnown RBP18.23■□□□□ 0.51
ZNF541-205ENST00000595558 ZNF710Q8N1W2 664 aa18.23■□□□□ 0.51
ZNF541-205ENST00000595558 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
ZNF541-205ENST00000595558 A0A087WZG4 1122 aa18.22■□□□□ 0.51
ZNF541-205ENST00000595558 NEXNQ0ZGT2 675 aa18.22■□□□□ 0.51
ZNF541-205ENST00000595558 CKAP2LQ8IYA6 745 aa18.22■□□□□ 0.51
ZNF541-205ENST00000595558 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
ZNF541-205ENST00000595558 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
ZNF541-205ENST00000595558 TFCP2Q12800 502 aa18.22■□□□□ 0.51
ZNF541-205ENST00000595558 GPATCH3Q96I76 525 aa18.22■□□□□ 0.51
ZNF541-205ENST00000595558 LUZP1Q86V48 1076 aa18.21■□□□□ 0.51
ZNF541-205ENST00000595558 MAP7D2Q96T17 732 aa18.21■□□□□ 0.51
ZNF541-205ENST00000595558 SPTLC3Q9NUV7 552 aa18.21■□□□□ 0.51
ZNF541-205ENST00000595558 TOB2Q14106 344 aaPredicted RBP18.2■□□□□ 0.5
ZNF541-205ENST00000595558 FMNL2Q96PY5 1086 aa18.2■□□□□ 0.5
ZNF541-205ENST00000595558 SEC62Q99442 399 aaKnown RBP18.2■□□□□ 0.5
ZNF541-205ENST00000595558 FSD1Q9BTV5 496 aa18.2■□□□□ 0.5
ZNF541-205ENST00000595558 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
ZNF541-205ENST00000595558 ZNF594Q96JF6 807 aaPredicted RBP18.2■□□□□ 0.5
ZNF541-205ENST00000595558 KAT6BQ8WYB5 2073 aa18.2■□□□□ 0.5
ZNF541-205ENST00000595558 ERC1Q8IUD2 1116 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 C5P01031 1676 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 LMBR1LQ6UX01 489 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 KIAA1524Q8TCG1 905 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 DACT1Q9NYF0 836 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
ZNF541-205ENST00000595558 PHRF1Q9P1Y6 1649 aaKnown RBP18.19■□□□□ 0.5
ZNF541-205ENST00000595558 CCDC192P0DO97 292 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 KRT85P78386 507 aa18.19■□□□□ 0.5
ZNF541-205ENST00000595558 PTPN12Q05209 780 aaKnown RBP18.19■□□□□ 0.5
ZNF541-205ENST00000595558 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
ZNF541-205ENST00000595558 JAK2O60674 1132 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 DBNDD2Q9BQY9 259 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 ALS2Q96Q42 1657 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 TYRO3Q06418 890 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 NUP62CLQ9H1M0 184 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
ZNF541-205ENST00000595558 PTGS1P23219 599 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 ZCRB1Q8TBF4 217 aaKnown RBP18.17■□□□□ 0.5
ZNF541-205ENST00000595558 GOLGB1Q14789 3259 aaKnown RBP18.17■□□□□ 0.5
ZNF541-205ENST00000595558 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 COL15A1P39059 1388 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 UTYO14607 1347 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 PPFIA3O75145 1194 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 TIMM10P62072 90 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 MAP3K11Q16584 847 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 PRIMPOLQ96LW4 560 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
ZNF541-205ENST00000595558 RFX5P48382 616 aaPredicted RBP18.16■□□□□ 0.5
ZNF541-205ENST00000595558 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
ZNF541-205ENST00000595558 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
ZNF541-205ENST00000595558 ANO6Q4KMQ2 910 aa18.16■□□□□ 0.5
ZNF541-205ENST00000595558 PSMA5P28066 241 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 HMGN5P82970 282 aaKnown RBP18.15■□□□□ 0.5
ZNF541-205ENST00000595558 LRMPQ12912 555 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 FAM200AQ8TCP9 573 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 NR1I2O75469 434 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 LEO1Q8WVC0 666 aaPredicted RBP18.15■□□□□ 0.5
ZNF541-205ENST00000595558 PGBD1Q96JS3 809 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 NEUROD6Q96NK8 337 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms