RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
ZNF548-203ENST00000594668 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
ZNF548-203ENST00000594668 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
ZNF548-203ENST00000594668 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
ZNF548-203ENST00000594668 H0YIN7 160 aa11.67□□□□□ -0.54
ZNF548-203ENST00000594668 CSF1RP07333 972 aa11.67□□□□□ -0.54
ZNF548-203ENST00000594668 GNAI3P08754 354 aa11.67□□□□□ -0.54
ZNF548-203ENST00000594668 UBTFL1P0CB47 393 aaPredicted RBP11.67□□□□□ -0.54
ZNF548-203ENST00000594668 CTSWP56202 376 aa11.67□□□□□ -0.54
ZNF548-203ENST00000594668 ANKRD44Q8N8A2 993 aa11.67□□□□□ -0.54
ZNF548-203ENST00000594668 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
ZNF548-203ENST00000594668 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
ZNF548-203ENST00000594668 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
ZNF548-203ENST00000594668 ARFGEF1Q9Y6D6 1849 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 HSP90B1P14625 803 aaKnown RBP11.66□□□□□ -0.54
ZNF548-203ENST00000594668 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
ZNF548-203ENST00000594668 LMBR1LQ6UX01 489 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
ZNF548-203ENST00000594668 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 GREM2Q9H772 168 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 ZBTB40Q9NUA8 1239 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
ZNF548-203ENST00000594668 GNAI2P04899 355 aa11.65□□□□□ -0.54
ZNF548-203ENST00000594668 NPR1P16066 1061 aa11.65□□□□□ -0.54
ZNF548-203ENST00000594668 HOXA10P31260 410 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-203ENST00000594668 RABL6Q3YEC7 729 aaPredicted RBP11.65□□□□□ -0.54
ZNF548-203ENST00000594668 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
ZNF548-203ENST00000594668 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
ZNF548-203ENST00000594668 CCDC88AQ3V6T2 1871 aa11.65□□□□□ -0.54
ZNF548-203ENST00000594668 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
ZNF548-203ENST00000594668 CCDC152Q4G0S7 254 aa11.64□□□□□ -0.55
ZNF548-203ENST00000594668 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
ZNF548-203ENST00000594668 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
ZNF548-203ENST00000594668 RBM17Q96I25 401 aaKnown RBP11.64□□□□□ -0.55
ZNF548-203ENST00000594668 CRAMP1Q96RY5 1269 aa11.64□□□□□ -0.55
ZNF548-203ENST00000594668 PIM2Q9P1W9 311 aa11.64□□□□□ -0.55
ZNF548-203ENST00000594668 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
ZNF548-203ENST00000594668 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
ZNF548-203ENST00000594668 ITGA6P23229 1130 aa11.63□□□□□ -0.55
ZNF548-203ENST00000594668 ALDH1B1P30837 517 aa11.63□□□□□ -0.55
ZNF548-203ENST00000594668 EXOC6Q8TAG9 804 aa11.63□□□□□ -0.55
ZNF548-203ENST00000594668 HDAC5Q9UQL6 1122 aa11.63□□□□□ -0.55
ZNF548-203ENST00000594668 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
ZNF548-203ENST00000594668 GOLGB1Q14789 3259 aaKnown RBP11.62□□□□□ -0.55
ZNF548-203ENST00000594668 FER1L6Q2WGJ9 1857 aa11.62□□□□□ -0.55
ZNF548-203ENST00000594668 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
ZNF548-203ENST00000594668 GRAPQ13588 217 aa11.62□□□□□ -0.55
ZNF548-203ENST00000594668 SLC51AQ86UW1 340 aa11.62□□□□□ -0.55
ZNF548-203ENST00000594668 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
ZNF548-203ENST00000594668 GRAPLQ8TC17 118 aaPredicted RBP11.62□□□□□ -0.55
ZNF548-203ENST00000594668 CNKSR1Q969H4 720 aa11.62□□□□□ -0.55
ZNF548-203ENST00000594668 ZNF594Q96JF6 807 aaPredicted RBP11.62□□□□□ -0.55
ZNF548-203ENST00000594668 LRRC37AA6NMS7 1700 aa11.61□□□□□ -0.55
ZNF548-203ENST00000594668 PNMA6EA0A0J9YXQ4 647 aa11.61□□□□□ -0.55
ZNF548-203ENST00000594668 ANKRD18BA2A2Z9 1011 aa11.61□□□□□ -0.55
ZNF548-203ENST00000594668 RFX5P48382 616 aaPredicted RBP11.61□□□□□ -0.55
ZNF548-203ENST00000594668 RPS8P62241 208 aaKnown RBP11.61□□□□□ -0.55
ZNF548-203ENST00000594668 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
ZNF548-203ENST00000594668 DALRD3Q5D0E6 543 aaKnown RBP11.61□□□□□ -0.55
ZNF548-203ENST00000594668 PRPF40BQ6NWY9 871 aaKnown RBP11.61□□□□□ -0.55
ZNF548-203ENST00000594668 KLHDC4Q8TBB5 520 aa11.61□□□□□ -0.55
ZNF548-203ENST00000594668 CHMP4BQ9H444 224 aaKnown RBP11.61□□□□□ -0.55
ZNF548-203ENST00000594668 SBF1O95248 1867 aa11.61□□□□□ -0.55
ZNF548-203ENST00000594668 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 BBOX1O75936 387 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 MTX1Q13505 466 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 CCDC57Q2TAC2 916 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 CEP85Q6P2H3 762 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 SIRT2Q8IXJ6 389 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
ZNF548-203ENST00000594668 BCS1LQ9Y276 419 aa11.6□□□□□ -0.55
ZNF548-203ENST00000594668 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
ZNF548-203ENST00000594668 C21orf2O43822 256 aa11.59□□□□□ -0.55
ZNF548-203ENST00000594668 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
ZNF548-203ENST00000594668 PTPN12Q05209 780 aaKnown RBP11.59□□□□□ -0.55
ZNF548-203ENST00000594668 SSH3Q8TE77 659 aa11.59□□□□□ -0.55
ZNF548-203ENST00000594668 CDC5LQ99459 802 aaKnown RBP11.59□□□□□ -0.55
ZNF548-203ENST00000594668 PUS3Q9BZE2 481 aaKnown RBP11.59□□□□□ -0.55
ZNF548-203ENST00000594668 PA2G4Q9UQ80 394 aaKnown RBP11.59□□□□□ -0.55
ZNF548-203ENST00000594668 PCDHB15Q9Y5E8 787 aa11.59□□□□□ -0.55
ZNF548-203ENST00000594668 LTBP1Q14766 1721 aa11.58□□□□□ -0.56
ZNF548-203ENST00000594668 IGHMBP2P38935 993 aaKnown RBP11.58□□□□□ -0.56
ZNF548-203ENST00000594668 POLA2Q14181 598 aa11.58□□□□□ -0.56
ZNF548-203ENST00000594668 RPAP2Q8IXW5 612 aaPredicted RBP11.58□□□□□ -0.56
ZNF548-203ENST00000594668 SP8Q8IXZ3 490 aa11.58□□□□□ -0.56
ZNF548-203ENST00000594668 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
ZNF548-203ENST00000594668 ATP6V0A2Q9Y487 856 aa11.58□□□□□ -0.56
ZNF548-203ENST00000594668 CHD4Q14839 1912 aa11.57□□□□□ -0.56
ZNF548-203ENST00000594668 LRRC24Q50LG9 513 aa11.57□□□□□ -0.56
ZNF548-203ENST00000594668 TAF7LQ5H9L4 462 aa11.57□□□□□ -0.56
ZNF548-203ENST00000594668 LDHAL6AQ6ZMR3 332 aa11.57□□□□□ -0.56
ZNF548-203ENST00000594668 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
ZNF548-203ENST00000594668 MPHOSPH8Q99549 860 aa11.57□□□□□ -0.56
ZNF548-203ENST00000594668 COPRSQ9NQ92 184 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms