RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PRIMPOLQ96LW4 560 aa18.48■□□□□ 0.55
PNKP-204ENST00000594661 ERC2O15083 957 aa18.47■□□□□ 0.55
PNKP-204ENST00000594661 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
PNKP-204ENST00000594661 G3BP1Q13283 466 aaKnown RBP eCLIP18.47■□□□□ 0.55
PNKP-204ENST00000594661 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
PNKP-204ENST00000594661 USP42Q9H9J4 1324 aaKnown RBP18.47■□□□□ 0.55
PNKP-204ENST00000594661 K7ELQ4 463 aaPredicted RBP18.47■□□□□ 0.55
PNKP-204ENST00000594661 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
PNKP-204ENST00000594661 CCDC191Q8NCU4 936 aa18.47■□□□□ 0.55
PNKP-204ENST00000594661 RABEP1Q15276 862 aa18.46■□□□□ 0.55
PNKP-204ENST00000594661 FAM98CQ17RN3 349 aaKnown RBP18.46■□□□□ 0.55
PNKP-204ENST00000594661 ZBTB1Q9Y2K1 713 aa18.46■□□□□ 0.55
PNKP-204ENST00000594661 MAP4K4O95819 1239 aaPredicted RBP18.46■□□□□ 0.55
PNKP-204ENST00000594661 FOXO4P98177 505 aa18.46■□□□□ 0.55
PNKP-204ENST00000594661 KIF6Q6ZMV9 814 aa18.46■□□□□ 0.55
PNKP-204ENST00000594661 ISCA1Q9BUE6 129 aa18.46■□□□□ 0.55
PNKP-204ENST00000594661 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
PNKP-204ENST00000594661 HMGN5P82970 282 aaKnown RBP18.45■□□□□ 0.54
PNKP-204ENST00000594661 PTPN12Q05209 780 aaKnown RBP18.45■□□□□ 0.54
PNKP-204ENST00000594661 TCIRG1Q13488 830 aa18.45■□□□□ 0.54
PNKP-204ENST00000594661 VPS72Q15906 364 aa18.45■□□□□ 0.54
PNKP-204ENST00000594661 RBSNQ9H1K0 784 aa18.45■□□□□ 0.54
PNKP-204ENST00000594661 COPRSQ9NQ92 184 aa18.45■□□□□ 0.54
PNKP-204ENST00000594661 LMBR1LQ6UX01 489 aa18.44■□□□□ 0.54
PNKP-204ENST00000594661 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
PNKP-204ENST00000594661 AACSQ86V21 672 aa18.44■□□□□ 0.54
PNKP-204ENST00000594661 TTC41PQ6P2S7 1318 aa18.44■□□□□ 0.54
PNKP-204ENST00000594661 CHMLP26374 656 aa18.44■□□□□ 0.54
PNKP-204ENST00000594661 EAF2Q96CJ1 260 aaPredicted RBP18.44■□□□□ 0.54
PNKP-204ENST00000594661 MAP3K15Q6ZN16 1313 aa18.44■□□□□ 0.54
PNKP-204ENST00000594661 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
PNKP-204ENST00000594661 AK9Q5TCS8 1911 aa18.43■□□□□ 0.54
PNKP-204ENST00000594661 VGLL3A8MV65 326 aa18.43■□□□□ 0.54
PNKP-204ENST00000594661 ZSCAN23Q3MJ62 389 aa18.43■□□□□ 0.54
PNKP-204ENST00000594661 FNBP4Q8N3X1 1017 aaPredicted RBP18.43■□□□□ 0.54
PNKP-204ENST00000594661 ESYT1Q9BSJ8 1104 aa18.43■□□□□ 0.54
PNKP-204ENST00000594661 HLFQ16534 295 aa18.42■□□□□ 0.54
PNKP-204ENST00000594661 CERKQ8TCT0 537 aa18.42■□□□□ 0.54
PNKP-204ENST00000594661 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
PNKP-204ENST00000594661 TLR7Q9NYK1 1049 aaKnown RBP18.42■□□□□ 0.54
PNKP-204ENST00000594661 SLC20A2Q08357 652 aa18.41■□□□□ 0.54
PNKP-204ENST00000594661 CCDC8Q9H0W5 538 aaPredicted RBP18.41■□□□□ 0.54
PNKP-204ENST00000594661 ECHDC1Q9NTX5 307 aa18.41■□□□□ 0.54
PNKP-204ENST00000594661 CHMP3Q9Y3E7 222 aa18.41■□□□□ 0.54
PNKP-204ENST00000594661 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
PNKP-204ENST00000594661 KCNQ2O43526 872 aa18.41■□□□□ 0.54
PNKP-204ENST00000594661 GLRX3O76003 335 aaKnown RBP18.41■□□□□ 0.54
PNKP-204ENST00000594661 BAG4O95429 457 aaKnown RBP18.41■□□□□ 0.54
PNKP-204ENST00000594661 GIGYF2Q6Y7W6 1299 aaKnown RBP18.41■□□□□ 0.54
PNKP-204ENST00000594661 KIAA2012Q0VF49 1180 aa18.4■□□□□ 0.54
PNKP-204ENST00000594661 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
PNKP-204ENST00000594661 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
PNKP-204ENST00000594661 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
PNKP-204ENST00000594661 LOC102724428A0A0B4J2F2 783 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 SSFA2P28290 1259 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 IL6STP40189 918 aaPredicted RBP18.39■□□□□ 0.53
PNKP-204ENST00000594661 SIK1P57059 783 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 CNTROBQ8N137 903 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 IL25Q9H293 177 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 USP21Q9UK80 565 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 PALLDQ8WX93 1383 aa18.39■□□□□ 0.53
PNKP-204ENST00000594661 TFCP2Q12800 502 aa18.38■□□□□ 0.53
PNKP-204ENST00000594661 ANKRD36CQ5JPF3 1778 aa18.38■□□□□ 0.53
PNKP-204ENST00000594661 GPTP24298 496 aa18.38■□□□□ 0.53
PNKP-204ENST00000594661 ITPK1Q13572 414 aa18.38■□□□□ 0.53
PNKP-204ENST00000594661 INTS5Q6P9B9 1019 aaKnown RBP18.38■□□□□ 0.53
PNKP-204ENST00000594661 CGNQ9P2M7 1197 aaKnown RBP18.38■□□□□ 0.53
PNKP-204ENST00000594661 ST18O60284 1047 aa18.37■□□□□ 0.53
PNKP-204ENST00000594661 CDK11BP21127 795 aaKnown RBP18.37■□□□□ 0.53
PNKP-204ENST00000594661 FAM89AQ96GI7 184 aa18.37■□□□□ 0.53
PNKP-204ENST00000594661 TBC1D2BQ9UPU7 963 aa18.37■□□□□ 0.53
PNKP-204ENST00000594661 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
PNKP-204ENST00000594661 PCCAP05165 728 aaPredicted RBP18.37■□□□□ 0.53
PNKP-204ENST00000594661 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
PNKP-204ENST00000594661 ANO2Q9NQ90 1003 aa18.37■□□□□ 0.53
PNKP-204ENST00000594661 CCDC87Q9NVE4 849 aa18.37■□□□□ 0.53
PNKP-204ENST00000594661 NUP98P52948 1817 aa18.36■□□□□ 0.53
PNKP-204ENST00000594661 CRKLP46109 303 aaKnown RBP18.36■□□□□ 0.53
PNKP-204ENST00000594661 TNNI3KQ59H18 835 aa18.36■□□□□ 0.53
PNKP-204ENST00000594661 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
PNKP-204ENST00000594661 RREB1Q92766 1687 aa18.36■□□□□ 0.53
PNKP-204ENST00000594661 FPGT-TNNI3KV9GXZ4 949 aa18.36■□□□□ 0.53
PNKP-204ENST00000594661 HSPA1LP34931 641 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
PNKP-204ENST00000594661 CAVIN1Q6NZI2 390 aaKnown RBP18.35■□□□□ 0.53
PNKP-204ENST00000594661 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
PNKP-204ENST00000594661 KIF3AQ9Y496 699 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 THSD7AQ9UPZ6 1657 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 MCCP23508 829 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 PLCD3Q8N3E9 789 aa18.35■□□□□ 0.53
PNKP-204ENST00000594661 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
PNKP-204ENST00000594661 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
PNKP-204ENST00000594661 DNTTIP2Q5QJE6 756 aaKnown RBP18.34■□□□□ 0.53
PNKP-204ENST00000594661 DBNLQ9UJU6 430 aaKnown RBP18.34■□□□□ 0.53
PNKP-204ENST00000594661 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
PNKP-204ENST00000594661 IRX5P78411 483 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms