RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 SLC51AQ86UW1 340 aa21.73■■□□□ 1.07
LTBP4-209ENST00000594116 LARGE2Q8N3Y3 721 aa21.73■■□□□ 1.07
LTBP4-209ENST00000594116 CHMP4AQ9BY43 222 aa21.73■■□□□ 1.07
LTBP4-209ENST00000594116 TMX4Q9H1E5 349 aaPredicted RBP21.73■■□□□ 1.07
LTBP4-209ENST00000594116 TRMT112Q9UI30 125 aaKnown RBP21.73■■□□□ 1.07
LTBP4-209ENST00000594116 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
LTBP4-209ENST00000594116 TCERG1O14776 1098 aaKnown RBP21.72■■□□□ 1.07
LTBP4-209ENST00000594116 EIF6P56537 245 aaKnown RBP21.72■■□□□ 1.07
LTBP4-209ENST00000594116 PNMA8AQ86V59 439 aaPredicted RBP21.72■■□□□ 1.07
LTBP4-209ENST00000594116 VPS33BQ9H267 617 aa21.72■■□□□ 1.07
LTBP4-209ENST00000594116 HCLS1P14317 486 aaPredicted RBP21.71■■□□□ 1.07
LTBP4-209ENST00000594116 EAPPQ56P03 285 aaPredicted RBP21.71■■□□□ 1.07
LTBP4-209ENST00000594116 CCDC30Q5VVM6 783 aa21.71■■□□□ 1.07
LTBP4-209ENST00000594116 ANKRD13DQ6ZTN6 518 aa21.71■■□□□ 1.07
LTBP4-209ENST00000594116 HYPKQ9NX55 129 aa21.71■■□□□ 1.07
LTBP4-209ENST00000594116 LTBP1Q14766 1721 aa21.71■■□□□ 1.07
LTBP4-209ENST00000594116 LRRC37AA6NMS7 1700 aa21.7■■□□□ 1.06
LTBP4-209ENST00000594116 BBOX1O75936 387 aa21.7■■□□□ 1.06
LTBP4-209ENST00000594116 ALDH1L2Q3SY69 923 aa21.7■■□□□ 1.06
LTBP4-209ENST00000594116 TAF1P21675 1872 aa21.69■■□□□ 1.06
LTBP4-209ENST00000594116 RARSP54136 660 aaKnown RBP21.69■■□□□ 1.06
LTBP4-209ENST00000594116 ISCA1Q9BUE6 129 aa21.69■■□□□ 1.06
LTBP4-209ENST00000594116 RTFDC1Q9BY42 306 aaPredicted RBP21.69■■□□□ 1.06
LTBP4-209ENST00000594116 PPIP5K2O43314 1243 aa21.68■■□□□ 1.06
LTBP4-209ENST00000594116 ITGBL1O95965 494 aaPredicted RBP21.68■■□□□ 1.06
LTBP4-209ENST00000594116 DDX46Q7L014 1031 aaKnown RBP21.68■■□□□ 1.06
LTBP4-209ENST00000594116 SP8Q8IXZ3 490 aa21.68■■□□□ 1.06
LTBP4-209ENST00000594116 NIM1KQ8IY84 436 aa21.68■■□□□ 1.06
LTBP4-209ENST00000594116 SUPT20HQ8NEM7 779 aa21.68■■□□□ 1.06
LTBP4-209ENST00000594116 GJA3Q9Y6H8 435 aa21.68■■□□□ 1.06
LTBP4-209ENST00000594116 GRAPQ13588 217 aa21.67■■□□□ 1.06
LTBP4-209ENST00000594116 AOC3Q16853 763 aa21.67■■□□□ 1.06
LTBP4-209ENST00000594116 GRAPLQ8TC17 118 aaPredicted RBP21.67■■□□□ 1.06
LTBP4-209ENST00000594116 SSH1Q8WYL5 1049 aa21.67■■□□□ 1.06
LTBP4-209ENST00000594116 CLEC11AQ9Y240 323 aa21.67■■□□□ 1.06
LTBP4-209ENST00000594116 LMOD1P29536 600 aaPredicted RBP21.66■■□□□ 1.06
LTBP4-209ENST00000594116 SCNN1DP51172 638 aa21.66■■□□□ 1.06
LTBP4-209ENST00000594116 BRPF1P55201 1214 aaPredicted RBP21.66■■□□□ 1.06
LTBP4-209ENST00000594116 TMC4Q7Z404 712 aa21.66■■□□□ 1.06
LTBP4-209ENST00000594116 STK31Q9BXU1 1019 aa21.66■■□□□ 1.06
LTBP4-209ENST00000594116 RCAN3Q9UKA8 241 aa21.66■■□□□ 1.06
LTBP4-209ENST00000594116 TRIM28Q13263 835 aaKnown RBP21.65■■□□□ 1.06
LTBP4-209ENST00000594116 DPP8Q6V1X1 898 aaPredicted RBP21.65■■□□□ 1.06
LTBP4-209ENST00000594116 DUOX1Q9NRD9 1551 aa21.65■■□□□ 1.06
LTBP4-209ENST00000594116 CNTNAP1P78357 1384 aa21.64■■□□□ 1.06
LTBP4-209ENST00000594116 TMEM88BA6NKF7 163 aa21.64■■□□□ 1.05
LTBP4-209ENST00000594116 ATP5J2-PTCD1G3V325 749 aa21.64■■□□□ 1.05
LTBP4-209ENST00000594116 MPNDQ8N594 471 aa21.64■■□□□ 1.05
LTBP4-209ENST00000594116 MRPL50Q8N5N7 158 aaKnown RBP21.64■■□□□ 1.05
LTBP4-209ENST00000594116 FAM89AQ96GI7 184 aa21.64■■□□□ 1.05
LTBP4-209ENST00000594116 MKRN1Q9UHC7 482 aaKnown RBP21.64■■□□□ 1.05
LTBP4-209ENST00000594116 HSPA1AP0DMV8 641 aaKnown RBP21.63■■□□□ 1.05
LTBP4-209ENST00000594116 HSPA1BP0DMV9 641 aaKnown RBP21.63■■□□□ 1.05
LTBP4-209ENST00000594116 KIAA2012Q0VF49 1180 aa21.63■■□□□ 1.05
LTBP4-209ENST00000594116 SF3B3Q15393 1217 aaKnown RBP21.63■■□□□ 1.05
LTBP4-209ENST00000594116 CNTROBQ8N137 903 aa21.63■■□□□ 1.05
LTBP4-209ENST00000594116 SMC4Q9NTJ3 1288 aa21.63■■□□□ 1.05
LTBP4-209ENST00000594116 ZNRF3Q9ULT6 936 aa21.63■■□□□ 1.05
LTBP4-209ENST00000594116 SLC4A2P04920 1241 aa21.62■■□□□ 1.05
LTBP4-209ENST00000594116 EPS15P42566 896 aa21.62■■□□□ 1.05
LTBP4-209ENST00000594116 MAP1SQ66K74 1059 aaPredicted RBP21.62■■□□□ 1.05
LTBP4-209ENST00000594116 BCL2L13Q9BXK5 485 aa21.62■■□□□ 1.05
LTBP4-209ENST00000594116 COL13A1Q5TAT6 717 aaPredicted RBP21.61■■□□□ 1.05
LTBP4-209ENST00000594116 USP50Q70EL3 339 aaPredicted RBP21.61■■□□□ 1.05
LTBP4-209ENST00000594116 BCAR3O75815 825 aa21.6■■□□□ 1.05
LTBP4-209ENST00000594116 CENPBP07199 599 aaPredicted RBP21.6■■□□□ 1.05
LTBP4-209ENST00000594116 CXCL9Q07325 125 aa21.6■■□□□ 1.05
LTBP4-209ENST00000594116 RIC3Q7Z5B4 369 aa21.6■■□□□ 1.05
LTBP4-209ENST00000594116 PHAXQ9H814 394 aaKnown RBP21.6■■□□□ 1.05
LTBP4-209ENST00000594116 COL4A1P02462 1669 aa21.6■■□□□ 1.05
LTBP4-209ENST00000594116 KIF16BQ96L93 1317 aa21.59■■□□□ 1.05
LTBP4-209ENST00000594116 CDHR2Q9BYE9 1310 aa21.59■■□□□ 1.05
LTBP4-209ENST00000594116 G2E3Q7L622 706 aa21.59■■□□□ 1.05
LTBP4-209ENST00000594116 GPRC5DQ9NZD1 345 aa21.59■■□□□ 1.05
LTBP4-209ENST00000594116 IRS4O14654 1257 aaPredicted RBP21.58■■□□□ 1.05
LTBP4-209ENST00000594116 ZBTB38Q8NAP3 1195 aaPredicted RBP21.58■■□□□ 1.05
LTBP4-209ENST00000594116 CELF1Q92879 486 aaKnown RBP21.58■■□□□ 1.05
LTBP4-209ENST00000594116 TRPM7Q96QT4 1865 aa21.58■■□□□ 1.04
LTBP4-209ENST00000594116 FLIIQ13045 1269 aa21.57■■□□□ 1.04
LTBP4-209ENST00000594116 RTL5Q5HYW3 569 aaPredicted RBP21.57■■□□□ 1.04
LTBP4-209ENST00000594116 CIAPIN1Q6FI81 312 aa21.57■■□□□ 1.04
LTBP4-209ENST00000594116 ADARB2Q9NS39 739 aaKnown RBP21.57■■□□□ 1.04
LTBP4-209ENST00000594116 PTPRCP08575 1304 aa21.56■■□□□ 1.04
LTBP4-209ENST00000594116 HSP90B1P14625 803 aaKnown RBP21.56■■□□□ 1.04
LTBP4-209ENST00000594116 TNIP1Q15025 636 aa21.56■■□□□ 1.04
LTBP4-209ENST00000594116 CCDC191Q8NCU4 936 aa21.56■■□□□ 1.04
LTBP4-209ENST00000594116 RASSF10A6NK89 507 aa21.55■■□□□ 1.04
LTBP4-209ENST00000594116 DDX58O95786 925 aaKnown RBP21.55■■□□□ 1.04
LTBP4-209ENST00000594116 GMPSP49915 693 aaPredicted RBP21.55■■□□□ 1.04
LTBP4-209ENST00000594116 MYD88Q99836 296 aa21.55■■□□□ 1.04
LTBP4-209ENST00000594116 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
LTBP4-209ENST00000594116 VEGFBP49765 207 aa21.54■■□□□ 1.04
LTBP4-209ENST00000594116 ARHGAP45Q92619 1136 aa21.54■■□□□ 1.04
LTBP4-209ENST00000594116 METTL22Q9BUU2 404 aaPredicted RBP21.54■■□□□ 1.04
LTBP4-209ENST00000594116 NOB1Q9ULX3 412 aaKnown RBP21.54■■□□□ 1.04
LTBP4-209ENST00000594116 YDJCA8MPS7 323 aa21.53■■□□□ 1.04
LTBP4-209ENST00000594116 RAD17O75943 681 aa21.53■■□□□ 1.04
LTBP4-209ENST00000594116 RPS8P62241 208 aaKnown RBP21.53■■□□□ 1.04
LTBP4-209ENST00000594116 WASHC4Q2M389 1173 aa21.53■■□□□ 1.04
LTBP4-209ENST00000594116 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms