RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 BMP2KLQ5H9B9 411 aa18.7■□□□□ 0.58
VRK3-207ENST00000594092 ZNF594Q96JF6 807 aaPredicted RBP18.7■□□□□ 0.58
VRK3-207ENST00000594092 OSBPL3Q9H4L5 887 aa18.7■□□□□ 0.58
VRK3-207ENST00000594092 GREM2Q9H772 168 aa18.7■□□□□ 0.58
VRK3-207ENST00000594092 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.7■□□□□ 0.58
VRK3-207ENST00000594092 LAMB2P55268 1798 aa18.69■□□□□ 0.58
VRK3-207ENST00000594092 GYS1P13807 737 aa18.69■□□□□ 0.58
VRK3-207ENST00000594092 HSP90B1P14625 803 aaKnown RBP18.69■□□□□ 0.58
VRK3-207ENST00000594092 EN1Q05925 392 aaPredicted RBP18.69■□□□□ 0.58
VRK3-207ENST00000594092 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
VRK3-207ENST00000594092 ERFEQ4G0M1 354 aa18.69■□□□□ 0.58
VRK3-207ENST00000594092 CLASRPQ8N2M8 674 aaKnown RBP18.69■□□□□ 0.58
VRK3-207ENST00000594092 MX1P20591 662 aa18.68■□□□□ 0.58
VRK3-207ENST00000594092 EZH2Q15910 746 aaKnown RBP18.68■□□□□ 0.58
VRK3-207ENST00000594092 TTC22Q5TAA0 569 aa18.68■□□□□ 0.58
VRK3-207ENST00000594092 NYXQ9GZU5 481 aa18.68■□□□□ 0.58
VRK3-207ENST00000594092 EYA2O00167 538 aa18.67■□□□□ 0.58
VRK3-207ENST00000594092 GSPT1P15170 499 aaKnown RBP18.67■□□□□ 0.58
VRK3-207ENST00000594092 ITGA6P23229 1130 aa18.67■□□□□ 0.58
VRK3-207ENST00000594092 NFIXQ14938 502 aa18.67■□□□□ 0.58
VRK3-207ENST00000594092 ATG9AQ7Z3C6 839 aa18.67■□□□□ 0.58
VRK3-207ENST00000594092 NBPF5PQ86XG9 351 aaPredicted RBP18.67■□□□□ 0.58
VRK3-207ENST00000594092 STAP2Q9UGK3 403 aa18.67■□□□□ 0.58
VRK3-207ENST00000594092 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
VRK3-207ENST00000594092 LRRC24Q50LG9 513 aa18.67■□□□□ 0.58
VRK3-207ENST00000594092 ANKRD18BA2A2Z9 1011 aa18.66■□□□□ 0.58
VRK3-207ENST00000594092 CIAO1O76071 339 aa18.66■□□□□ 0.58
VRK3-207ENST00000594092 IL15P40933 162 aaPredicted RBP18.66■□□□□ 0.58
VRK3-207ENST00000594092 TFCP2Q12800 502 aa18.66■□□□□ 0.58
VRK3-207ENST00000594092 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
VRK3-207ENST00000594092 PUS3Q9BZE2 481 aaKnown RBP18.66■□□□□ 0.58
VRK3-207ENST00000594092 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
VRK3-207ENST00000594092 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
VRK3-207ENST00000594092 GTF2E1P29083 439 aaPredicted RBP18.65■□□□□ 0.58
VRK3-207ENST00000594092 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
VRK3-207ENST00000594092 TAF7LQ5H9L4 462 aa18.65■□□□□ 0.58
VRK3-207ENST00000594092 SLC10A5Q5PT55 438 aa18.65■□□□□ 0.58
VRK3-207ENST00000594092 TPTE2Q6XPS3 522 aa18.65■□□□□ 0.58
VRK3-207ENST00000594092 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
VRK3-207ENST00000594092 ABCC12Q96J65 1359 aa18.65■□□□□ 0.58
VRK3-207ENST00000594092 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
VRK3-207ENST00000594092 AACSQ86V21 672 aa18.65■□□□□ 0.58
VRK3-207ENST00000594092 COL23A1Q86Y22 540 aaPredicted RBP18.65■□□□□ 0.58
VRK3-207ENST00000594092 AOX1Q06278 1338 aa18.64■□□□□ 0.57
VRK3-207ENST00000594092 IFIT2P09913 472 aaKnown RBP18.64■□□□□ 0.57
VRK3-207ENST00000594092 BAG6P46379 1132 aa18.64■□□□□ 0.57
VRK3-207ENST00000594092 FLAD1Q8NFF5 587 aa18.64■□□□□ 0.57
VRK3-207ENST00000594092 RTL9Q8NET4 1388 aa18.64■□□□□ 0.57
VRK3-207ENST00000594092 TM4SF1P30408 202 aa18.63■□□□□ 0.57
VRK3-207ENST00000594092 C3orf67Q6ZVT6 689 aa18.63■□□□□ 0.57
VRK3-207ENST00000594092 TNNI3KQ59H18 835 aa18.63■□□□□ 0.57
VRK3-207ENST00000594092 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
VRK3-207ENST00000594092 FPGT-TNNI3KV9GXZ4 949 aa18.63■□□□□ 0.57
VRK3-207ENST00000594092 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
VRK3-207ENST00000594092 SF3B3Q15393 1217 aaKnown RBP18.62■□□□□ 0.57
VRK3-207ENST00000594092 LDHAL6AQ6ZMR3 332 aa18.62■□□□□ 0.57
VRK3-207ENST00000594092 DEFB132Q7Z7B7 95 aa18.62■□□□□ 0.57
VRK3-207ENST00000594092 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
VRK3-207ENST00000594092 SEC31BQ9NQW1 1179 aa18.62■□□□□ 0.57
VRK3-207ENST00000594092 TTC41PQ6P2S7 1318 aa18.62■□□□□ 0.57
VRK3-207ENST00000594092 MSH5O43196 834 aa18.61■□□□□ 0.57
VRK3-207ENST00000594092 ANP32AP39687 249 aaKnown RBP18.61■□□□□ 0.57
VRK3-207ENST00000594092 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
VRK3-207ENST00000594092 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
VRK3-207ENST00000594092 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
VRK3-207ENST00000594092 RIPOR2Q9Y4F9 1068 aa18.61■□□□□ 0.57
VRK3-207ENST00000594092 LRP5O75197 1615 aa18.61■□□□□ 0.57
VRK3-207ENST00000594092 SDSP20132 328 aa18.6■□□□□ 0.57
VRK3-207ENST00000594092 SLC15A2Q16348 729 aa18.6■□□□□ 0.57
VRK3-207ENST00000594092 GPR108Q9NPR9 543 aa18.6■□□□□ 0.57
VRK3-207ENST00000594092 CASZ1Q86V15 1759 aa18.6■□□□□ 0.57
VRK3-207ENST00000594092 CNBD1Q8NA66 436 aa18.6■□□□□ 0.57
VRK3-207ENST00000594092 ECHDC1Q9NTX5 307 aa18.6■□□□□ 0.57
VRK3-207ENST00000594092 CEP126Q9P2H0 1117 aa18.6■□□□□ 0.57
VRK3-207ENST00000594092 NPHP1O15259 732 aa18.59■□□□□ 0.57
VRK3-207ENST00000594092 DDR1Q08345 913 aa18.59■□□□□ 0.57
VRK3-207ENST00000594092 GPATCH3Q96I76 525 aa18.59■□□□□ 0.57
VRK3-207ENST00000594092 NLRP3Q96P20 1036 aa18.59■□□□□ 0.57
VRK3-207ENST00000594092 CNNM1Q9NRU3 951 aa18.59■□□□□ 0.57
VRK3-207ENST00000594092 STK32BQ9NY57 414 aa18.59■□□□□ 0.57
VRK3-207ENST00000594092 RIC1Q4ADV7 1423 aa18.59■□□□□ 0.57
VRK3-207ENST00000594092 SERPINB2P05120 415 aa18.58■□□□□ 0.57
VRK3-207ENST00000594092 PRR5LQ6MZQ0 368 aa18.58■□□□□ 0.57
VRK3-207ENST00000594092 NLGN1Q8N2Q7 840 aa18.58■□□□□ 0.57
VRK3-207ENST00000594092 DBNLQ9UJU6 430 aaKnown RBP18.58■□□□□ 0.57
VRK3-207ENST00000594092 ZNF609O15014 1411 aa18.58■□□□□ 0.56
VRK3-207ENST00000594092 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.56
VRK3-207ENST00000594092 ERC2O15083 957 aa18.58■□□□□ 0.56
VRK3-207ENST00000594092 GLRX3O76003 335 aaKnown RBP18.58■□□□□ 0.56
VRK3-207ENST00000594092 SEC24BO95487 1268 aa18.58■□□□□ 0.56
VRK3-207ENST00000594092 METTL24Q5JXM2 366 aa18.57■□□□□ 0.56
VRK3-207ENST00000594092 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
VRK3-207ENST00000594092 COL4A1P02462 1669 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 TNRC6CQ9HCJ0 1690 aaKnown RBP18.56■□□□□ 0.56
VRK3-207ENST00000594092 CDC45O75419 566 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 IGHMBP2P38935 993 aaKnown RBP18.56■□□□□ 0.56
VRK3-207ENST00000594092 TBC1D9Q6ZT07 1266 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 CCDC125Q86Z20 511 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 MPHOSPH8Q99549 860 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms