RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CWF19L2Q2TBE0 894 aaKnown RBP23.66■■□□□ 1.38
SHKBP1-202ENST00000593764 DPY19L2Q6NUT2 758 aa23.66■■□□□ 1.38
SHKBP1-202ENST00000593764 SP8Q8IXZ3 490 aa23.66■■□□□ 1.38
SHKBP1-202ENST00000593764 MIER1Q8N108 512 aa23.66■■□□□ 1.38
SHKBP1-202ENST00000593764 NEXNQ0ZGT2 675 aa23.65■■□□□ 1.38
SHKBP1-202ENST00000593764 DNAAF4Q8WXU2 420 aa23.64■■□□□ 1.37
SHKBP1-202ENST00000593764 CELF1Q92879 486 aaKnown RBP23.64■■□□□ 1.37
SHKBP1-202ENST00000593764 CDCA7LQ96GN5 454 aa23.64■■□□□ 1.37
SHKBP1-202ENST00000593764 PDE8AO60658 829 aa23.63■■□□□ 1.37
SHKBP1-202ENST00000593764 DDNO94850 711 aaPredicted RBP23.63■■□□□ 1.37
SHKBP1-202ENST00000593764 HSP90B1P14625 803 aaKnown RBP23.63■■□□□ 1.37
SHKBP1-202ENST00000593764 COL4A1P02462 1669 aa23.63■■□□□ 1.37
SHKBP1-202ENST00000593764 CDHR2Q9BYE9 1310 aa23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 FZD9O00144 591 aa23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 VEGFAP15692 232 aaPredicted RBP23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 TRMT2AQ8IZ69 625 aaKnown RBP23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 RTFDC1Q9BY42 306 aaPredicted RBP23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 TMX4Q9H1E5 349 aaPredicted RBP23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 COL4A5P29400 1685 aa23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 CEP350Q5VT06 3117 aa23.62■■□□□ 1.37
SHKBP1-202ENST00000593764 H7C1W4 665 aa23.61■■□□□ 1.37
SHKBP1-202ENST00000593764 TMC4Q7Z404 712 aa23.61■■□□□ 1.37
SHKBP1-202ENST00000593764 SEC31BQ9NQW1 1179 aa23.61■■□□□ 1.37
SHKBP1-202ENST00000593764 ZNF541Q9H0D2 1346 aa23.6■■□□□ 1.37
SHKBP1-202ENST00000593764 WDR90Q96KV7 1748 aa23.6■■□□□ 1.37
SHKBP1-202ENST00000593764 F6X3S4 739 aa23.6■■□□□ 1.37
SHKBP1-202ENST00000593764 GCKRQ14397 625 aa23.6■■□□□ 1.37
SHKBP1-202ENST00000593764 MPNDQ8N594 471 aa23.6■■□□□ 1.37
SHKBP1-202ENST00000593764 LINS1Q8NG48 757 aa23.6■■□□□ 1.37
SHKBP1-202ENST00000593764 RBM46Q8TBY0 533 aaKnown RBP23.6■■□□□ 1.37
SHKBP1-202ENST00000593764 RPS8P62241 208 aaKnown RBP23.59■■□□□ 1.37
SHKBP1-202ENST00000593764 CCDC152Q4G0S7 254 aa23.59■■□□□ 1.37
SHKBP1-202ENST00000593764 DPP8Q6V1X1 898 aaPredicted RBP23.59■■□□□ 1.37
SHKBP1-202ENST00000593764 C16orf71Q8IYS4 520 aaPredicted RBP23.59■■□□□ 1.37
SHKBP1-202ENST00000593764 CASP7P55210 303 aa23.58■■□□□ 1.37
SHKBP1-202ENST00000593764 LARGE2Q8N3Y3 721 aa23.58■■□□□ 1.37
SHKBP1-202ENST00000593764 JDP2Q8WYK2 163 aa23.58■■□□□ 1.37
SHKBP1-202ENST00000593764 VPS33BQ9H267 617 aa23.58■■□□□ 1.37
SHKBP1-202ENST00000593764 AOC3Q16853 763 aa23.57■■□□□ 1.36
SHKBP1-202ENST00000593764 BEND3Q5T5X7 828 aa23.57■■□□□ 1.36
SHKBP1-202ENST00000593764 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
SHKBP1-202ENST00000593764 L3MBTL3Q96JM7 780 aaPredicted RBP23.57■■□□□ 1.36
SHKBP1-202ENST00000593764 CCDC85AQ96PX6 553 aaPredicted RBP23.57■■□□□ 1.36
SHKBP1-202ENST00000593764 PPIP5K2O43314 1243 aa23.56■■□□□ 1.36
SHKBP1-202ENST00000593764 CTSWP56202 376 aa23.56■■□□□ 1.36
SHKBP1-202ENST00000593764 MRPL50Q8N5N7 158 aaKnown RBP23.56■■□□□ 1.36
SHKBP1-202ENST00000593764 SUPT20HQ8NEM7 779 aa23.56■■□□□ 1.36
SHKBP1-202ENST00000593764 TTLL11Q8NHH1 800 aa23.56■■□□□ 1.36
SHKBP1-202ENST00000593764 LRRC37AA6NMS7 1700 aa23.56■■□□□ 1.36
SHKBP1-202ENST00000593764 HSPA6P17066 643 aa23.55■■□□□ 1.36
SHKBP1-202ENST00000593764 PLA2G12BQ9BX93 195 aa23.54■■□□□ 1.36
SHKBP1-202ENST00000593764 DUOX1Q9NRD9 1551 aa23.53■■□□□ 1.36
SHKBP1-202ENST00000593764 GPSM2P81274 684 aa23.53■■□□□ 1.36
SHKBP1-202ENST00000593764 KIAA2012Q0VF49 1180 aa23.53■■□□□ 1.36
SHKBP1-202ENST00000593764 FSTL1Q12841 308 aa23.53■■□□□ 1.36
SHKBP1-202ENST00000593764 SSH1Q8WYL5 1049 aa23.53■■□□□ 1.36
SHKBP1-202ENST00000593764 NSFL1CQ9UNZ2 370 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-202ENST00000593764 NIM1KQ8IY84 436 aa23.52■■□□□ 1.36
SHKBP1-202ENST00000593764 GPC2Q8N158 579 aa23.52■■□□□ 1.36
SHKBP1-202ENST00000593764 GREM2Q9H772 168 aa23.52■■□□□ 1.36
SHKBP1-202ENST00000593764 POLLQ9UGP5 575 aa23.52■■□□□ 1.36
SHKBP1-202ENST00000593764 EIF6P56537 245 aaKnown RBP23.51■■□□□ 1.35
SHKBP1-202ENST00000593764 RTL9Q8NET4 1388 aa23.51■■□□□ 1.35
SHKBP1-202ENST00000593764 CSF1RP07333 972 aa23.5■■□□□ 1.35
SHKBP1-202ENST00000593764 ANKRD18AQ8IVF6 992 aa23.5■■□□□ 1.35
SHKBP1-202ENST00000593764 SMC1BQ8NDV3 1235 aa23.5■■□□□ 1.35
SHKBP1-202ENST00000593764 PODXL2Q9NZ53 605 aa23.5■■□□□ 1.35
SHKBP1-202ENST00000593764 ZNRF3Q9ULT6 936 aa23.5■■□□□ 1.35
SHKBP1-202ENST00000593764 MYH3P11055 1940 aa23.49■■□□□ 1.35
SHKBP1-202ENST00000593764 IQCA1LA6NCM1 817 aa23.49■■□□□ 1.35
SHKBP1-202ENST00000593764 TAF1DQ9H5J8 278 aaPredicted RBP23.49■■□□□ 1.35
SHKBP1-202ENST00000593764 LTBP1Q14766 1721 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 POTEIP0CG38 1075 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 POTEJP0CG39 1038 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 WASHC4Q2M389 1173 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 ALDH1L2Q3SY69 923 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 SLC4A10Q6U841 1118 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 TBC1D16Q8TBP0 767 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 CDC5LQ99459 802 aaKnown RBP23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 BCL2L13Q9BXK5 485 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 GJA3Q9Y6H8 435 aa23.48■■□□□ 1.35
SHKBP1-202ENST00000593764 SCN4AP35499 1836 aa23.47■■□□□ 1.35
SHKBP1-202ENST00000593764 C6orf229H3BNL8 230 aa23.47■■□□□ 1.35
SHKBP1-202ENST00000593764 ALDH1L1O75891 902 aa23.47■■□□□ 1.35
SHKBP1-202ENST00000593764 CXCL9Q07325 125 aa23.47■■□□□ 1.35
SHKBP1-202ENST00000593764 HACL1Q9UJ83 578 aa23.47■■□□□ 1.35
SHKBP1-202ENST00000593764 YDJCA8MPS7 323 aa23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 GRM8O00222 908 aa23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 PTPRCP08575 1304 aa23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 CT47B1P0C2W7 299 aaPredicted RBP23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 FOXO4P98177 505 aa23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 GPR101Q96P66 508 aaPredicted RBP23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 SRCIN1Q9C0H9 1055 aa23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 BSDC1Q9NW68 430 aaPredicted RBP23.46■■□□□ 1.35
SHKBP1-202ENST00000593764 ITGA6P23229 1130 aa23.45■■□□□ 1.34
SHKBP1-202ENST00000593764 SCNN1DP51172 638 aa23.45■■□□□ 1.34
SHKBP1-202ENST00000593764 FAM161AQ3B820 660 aa23.45■■□□□ 1.34
SHKBP1-202ENST00000593764 ANKIB1Q9P2G1 1089 aa23.45■■□□□ 1.34
SHKBP1-202ENST00000593764 RIMBP2O15034 1052 aa23.44■■□□□ 1.34
SHKBP1-202ENST00000593764 EPHX2P34913 555 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms