RNA–Protein interactions for RNA: ENST00000593337.5

IRF3-205, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-205ENST00000593337 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
IRF3-205ENST00000593337 RCAN3Q9UKA8 241 aa23.23■■□□□ 1.31
IRF3-205ENST00000593337 UTYO14607 1347 aa23.23■■□□□ 1.31
IRF3-205ENST00000593337 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
IRF3-205ENST00000593337 ZKSCAN2Q63HK3 967 aa23.22■■□□□ 1.31
IRF3-205ENST00000593337 CCT4P50991 539 aaKnown RBP23.21■■□□□ 1.31
IRF3-205ENST00000593337 CTSWP56202 376 aa23.21■■□□□ 1.31
IRF3-205ENST00000593337 C7orf43Q8WVR3 580 aa23.21■■□□□ 1.31
IRF3-205ENST00000593337 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
IRF3-205ENST00000593337 DICER1Q9UPY3 1922 aaKnown RBP23.2■■□□□ 1.3
IRF3-205ENST00000593337 INTS3Q68E01 1043 aaKnown RBP23.2■■□□□ 1.3
IRF3-205ENST00000593337 RTL9Q8NET4 1388 aa23.19■■□□□ 1.3
IRF3-205ENST00000593337 C9orf78Q9NZ63 289 aaPredicted RBP23.19■■□□□ 1.3
IRF3-205ENST00000593337 NBPF7P0C2Y1 421 aaPredicted RBP23.18■■□□□ 1.3
IRF3-205ENST00000593337 CCDC152Q4G0S7 254 aa23.18■■□□□ 1.3
IRF3-205ENST00000593337 DDX46Q7L014 1031 aaKnown RBP23.18■■□□□ 1.3
IRF3-205ENST00000593337 TTLL11Q8NHH1 800 aa23.18■■□□□ 1.3
IRF3-205ENST00000593337 USP44Q9H0E7 712 aa23.18■■□□□ 1.3
IRF3-205ENST00000593337 LTBP1Q14766 1721 aa23.18■■□□□ 1.3
IRF3-205ENST00000593337 C21orf2O43822 256 aa23.17■■□□□ 1.3
IRF3-205ENST00000593337 FOXO4P98177 505 aa23.17■■□□□ 1.3
IRF3-205ENST00000593337 GRAPQ13588 217 aa23.17■■□□□ 1.3
IRF3-205ENST00000593337 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
IRF3-205ENST00000593337 CLUAP1Q96AJ1 413 aa23.17■■□□□ 1.3
IRF3-205ENST00000593337 A0A1B0GUL6 1792 aa23.17■■□□□ 1.3
IRF3-205ENST00000593337 PPEF1O14829 653 aaPredicted RBP23.16■■□□□ 1.3
IRF3-205ENST00000593337 CSF1RP07333 972 aa23.16■■□□□ 1.3
IRF3-205ENST00000593337 SLC51AQ86UW1 340 aa23.16■■□□□ 1.3
IRF3-205ENST00000593337 KAZALD1Q96I82 304 aa23.16■■□□□ 1.3
IRF3-205ENST00000593337 SUCLG2Q96I99 432 aa23.16■■□□□ 1.3
IRF3-205ENST00000593337 ZNF219Q9P2Y4 722 aaPredicted RBP23.16■■□□□ 1.3
IRF3-205ENST00000593337 EPHA10Q5JZY3 1008 aa23.15■■□□□ 1.3
IRF3-205ENST00000593337 OLFM4Q6UX06 510 aa23.15■■□□□ 1.3
IRF3-205ENST00000593337 CELF1Q92879 486 aaKnown RBP23.15■■□□□ 1.3
IRF3-205ENST00000593337 SEC31BQ9NQW1 1179 aa23.15■■□□□ 1.3
IRF3-205ENST00000593337 TIAM2Q8IVF5 1701 aa23.14■■□□□ 1.3
IRF3-205ENST00000593337 RLBP1P12271 317 aa23.14■■□□□ 1.29
IRF3-205ENST00000593337 SOGA3Q5TF21 947 aa23.14■■□□□ 1.29
IRF3-205ENST00000593337 ARHGAP27Q6ZUM4 889 aa23.14■■□□□ 1.29
IRF3-205ENST00000593337 CCDC85AQ96PX6 553 aaPredicted RBP23.14■■□□□ 1.29
IRF3-205ENST00000593337 GREM2Q9H772 168 aa23.14■■□□□ 1.29
IRF3-205ENST00000593337 NFKBIEO00221 500 aa23.13■■□□□ 1.29
IRF3-205ENST00000593337 BBOX1O75936 387 aa23.13■■□□□ 1.29
IRF3-205ENST00000593337 CCDC93Q567U6 631 aa23.13■■□□□ 1.29
IRF3-205ENST00000593337 TMEM57Q8N5G2 664 aa23.13■■□□□ 1.29
IRF3-205ENST00000593337 RASSF7Q02833 373 aa23.12■■□□□ 1.29
IRF3-205ENST00000593337 FAM161AQ3B820 660 aa23.12■■□□□ 1.29
IRF3-205ENST00000593337 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
IRF3-205ENST00000593337 DUOX1Q9NRD9 1551 aa23.12■■□□□ 1.29
IRF3-205ENST00000593337 ATP6V0A2Q9Y487 856 aa23.12■■□□□ 1.29
IRF3-205ENST00000593337 LTBP3Q9NS15 1303 aa23.11■■□□□ 1.29
IRF3-205ENST00000593337 TMC4Q7Z404 712 aa23.11■■□□□ 1.29
IRF3-205ENST00000593337 FTSJ3Q8IY81 847 aaKnown RBP23.11■■□□□ 1.29
IRF3-205ENST00000593337 MEIS3Q99687 375 aa23.11■■□□□ 1.29
IRF3-205ENST00000593337 RPS8P62241 208 aaKnown RBP23.1■■□□□ 1.29
IRF3-205ENST00000593337 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
IRF3-205ENST00000593337 CC2D2BQ6DHV5 1058 aa23.1■■□□□ 1.29
IRF3-205ENST00000593337 LMBR1LQ6UX01 489 aa23.1■■□□□ 1.29
IRF3-205ENST00000593337 ANKRD44Q8N8A2 993 aa23.1■■□□□ 1.29
IRF3-205ENST00000593337 BICC1Q9H694 974 aaKnown RBP23.1■■□□□ 1.29
IRF3-205ENST00000593337 PLIN1O60240 522 aa23.09■■□□□ 1.29
IRF3-205ENST00000593337 ITGA6P23229 1130 aa23.09■■□□□ 1.29
IRF3-205ENST00000593337 PRELPP51888 382 aa23.09■■□□□ 1.29
IRF3-205ENST00000593337 SP8Q8IXZ3 490 aa23.09■■□□□ 1.29
IRF3-205ENST00000593337 CDC5LQ99459 802 aaKnown RBP23.09■■□□□ 1.29
IRF3-205ENST00000593337 UBTFL1P0CB47 393 aaPredicted RBP23.08■■□□□ 1.29
IRF3-205ENST00000593337 ANKRD18AQ8IVF6 992 aa23.07■■□□□ 1.28
IRF3-205ENST00000593337 RTKN2Q8IZC4 609 aa23.07■■□□□ 1.28
IRF3-205ENST00000593337 PANK1Q8TE04 598 aa23.07■■□□□ 1.28
IRF3-205ENST00000593337 TAOK3Q9H2K8 898 aa23.07■■□□□ 1.28
IRF3-205ENST00000593337 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
IRF3-205ENST00000593337 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
IRF3-205ENST00000593337 PSMD1Q99460 953 aa23.06■■□□□ 1.28
IRF3-205ENST00000593337 GNAI3P08754 354 aa23.05■■□□□ 1.28
IRF3-205ENST00000593337 MS4A1P11836 297 aa23.05■■□□□ 1.28
IRF3-205ENST00000593337 ITPRIPQ8IWB1 547 aa23.05■■□□□ 1.28
IRF3-205ENST00000593337 CHMP3Q9Y3E7 222 aa23.05■■□□□ 1.28
IRF3-205ENST00000593337 ANKRD18BA2A2Z9 1011 aa23.04■■□□□ 1.28
IRF3-205ENST00000593337 IFIT5Q13325 482 aaKnown RBP23.04■■□□□ 1.28
IRF3-205ENST00000593337 BSDC1Q9NW68 430 aaPredicted RBP23.04■■□□□ 1.28
IRF3-205ENST00000593337 LRRFIP2Q9Y608 721 aaKnown RBP23.04■■□□□ 1.28
IRF3-205ENST00000593337 COL4A5P29400 1685 aa23.03■■□□□ 1.28
IRF3-205ENST00000593337 LMNB1P20700 586 aa23.03■■□□□ 1.28
IRF3-205ENST00000593337 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.03■■□□□ 1.28
IRF3-205ENST00000593337 RTFDC1Q9BY42 306 aaPredicted RBP23.03■■□□□ 1.28
IRF3-205ENST00000593337 IGHMBP2P38935 993 aaKnown RBP23.02■■□□□ 1.28
IRF3-205ENST00000593337 CCDC57Q2TAC2 916 aa23.02■■□□□ 1.28
IRF3-205ENST00000593337 C9orf131Q5VYM1 1079 aa23.02■■□□□ 1.28
IRF3-205ENST00000593337 HDAC5Q9UQL6 1122 aa23.02■■□□□ 1.28
IRF3-205ENST00000593337 ZBTB7BO15156 539 aaPredicted RBP23.01■■□□□ 1.27
IRF3-205ENST00000593337 PDE3AQ14432 1141 aa23.01■■□□□ 1.27
IRF3-205ENST00000593337 C20orf194Q5TEA3 1177 aa23.01■■□□□ 1.27
IRF3-205ENST00000593337 MPNDQ8N594 471 aa23.01■■□□□ 1.27
IRF3-205ENST00000593337 TMX4Q9H1E5 349 aaPredicted RBP23.01■■□□□ 1.27
IRF3-205ENST00000593337 RNF181Q9P0P0 153 aa23.01■■□□□ 1.27
IRF3-205ENST00000593337 RRP1P56182 461 aaKnown RBP23■■□□□ 1.27
IRF3-205ENST00000593337 GPSM2P81274 684 aa23■■□□□ 1.27
IRF3-205ENST00000593337 MVPQ14764 893 aaKnown RBP23■■□□□ 1.27
IRF3-205ENST00000593337 DPP8Q6V1X1 898 aaPredicted RBP23■■□□□ 1.27
IRF3-205ENST00000593337 ZNF277Q9NRM2 450 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms