RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 SURF6O75683 361 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 HSP90B1P14625 803 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 CTSWP56202 376 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 LNPKQ9C0E8 428 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 NYXQ9GZU5 481 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 COPRSQ9NQ92 184 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 PNPLA7Q6ZV29 1317 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 RIC1Q4ADV7 1423 aa14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 TNRC6CQ9HCJ0 1690 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-213ENST00000593267 RGS3P49796 1198 aa14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 PTPN12Q05209 780 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 NFIXQ14938 502 aa14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 GPR162Q16538 588 aa14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 BICDL1Q6ZP65 573 aa14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 TTLL11Q8NHH1 800 aa14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 LRRCC1Q9C099 1032 aa14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 PA2G4Q9UQ80 394 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-213ENST00000593267 RTL9Q8NET4 1388 aa14.27□□□□□ -0.12
CACNA1A-213ENST00000593267 ABCC12Q96J65 1359 aa14.27□□□□□ -0.12
CACNA1A-213ENST00000593267 FAM177BA6PVY3 158 aa14.27□□□□□ -0.13
CACNA1A-213ENST00000593267 POLD1P28340 1107 aa14.27□□□□□ -0.13
CACNA1A-213ENST00000593267 NUTM1Q86Y26 1132 aa14.27□□□□□ -0.13
CACNA1A-213ENST00000593267 KIF1BPQ96EK5 621 aa14.27□□□□□ -0.13
CACNA1A-213ENST00000593267 CHMP3Q9Y3E7 222 aa14.27□□□□□ -0.13
CACNA1A-213ENST00000593267 TM4SF1P30408 202 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 ERFEQ4G0M1 354 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 SPEF2Q9C093 1822 aa14.26□□□□□ -0.13
CACNA1A-213ENST00000593267 APBB1O00213 710 aa14.25□□□□□ -0.13
CACNA1A-213ENST00000593267 SMARCA5O60264 1052 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-213ENST00000593267 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-213ENST00000593267 G3BP1Q13283 466 aaKnown RBP eCLIP14.25□□□□□ -0.13
CACNA1A-213ENST00000593267 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
CACNA1A-213ENST00000593267 SALL3Q9BXA9 1300 aa14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 SASH1O94885 1247 aa14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 IFIT5Q13325 482 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 OS9Q13438 667 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 SIL1Q9H173 461 aa14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 GREM2Q9H772 168 aa14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 A0A1B0GUL6 1792 aa14.24□□□□□ -0.13
CACNA1A-213ENST00000593267 COL4A1P02462 1669 aa14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 ANKRD31Q8N7Z5 1873 aa14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 POLRMTO00411 1230 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 CIAO1O76071 339 aa14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 ITGA6P23229 1130 aa14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 DDR1Q08345 913 aa14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 SF3B3Q15393 1217 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 CCDC152Q4G0S7 254 aa14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 NLGN1Q8N2Q7 840 aa14.23□□□□□ -0.13
CACNA1A-213ENST00000593267 ANKRD18BA2A2Z9 1011 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 EYA2O00167 538 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 SERPINB2P05120 415 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 GTF2E1P29083 439 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 C1QTNF8P60827 252 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 PLEKHM2Q8IWE5 1019 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 C16orf71Q8IYS4 520 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 ZNF594Q96JF6 807 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 CCDC85AQ96PX6 553 aaPredicted RBP14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 IL1RAPL2Q9NP60 686 aa14.22□□□□□ -0.13
CACNA1A-213ENST00000593267 MSH5O43196 834 aa14.21□□□□□ -0.13
CACNA1A-213ENST00000593267 IL15P40933 162 aaPredicted RBP14.21□□□□□ -0.13
CACNA1A-213ENST00000593267 PRR5LQ6MZQ0 368 aa14.21□□□□□ -0.13
CACNA1A-213ENST00000593267 C3orf67Q6ZVT6 689 aa14.21□□□□□ -0.13
CACNA1A-213ENST00000593267 OTUD7AQ8TE49 926 aaPredicted RBP14.21□□□□□ -0.13
CACNA1A-213ENST00000593267 OSBPL3Q9H4L5 887 aa14.21□□□□□ -0.13
CACNA1A-213ENST00000593267 ARAP2Q8WZ64 1704 aa14.21□□□□□ -0.14
CACNA1A-213ENST00000593267 LRRC24Q50LG9 513 aa14.2□□□□□ -0.14
CACNA1A-213ENST00000593267 CLASRPQ8N2M8 674 aaKnown RBP14.2□□□□□ -0.14
CACNA1A-213ENST00000593267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.2□□□□□ -0.14
CACNA1A-213ENST00000593267 ZNF609O15014 1411 aa14.2□□□□□ -0.14
CACNA1A-213ENST00000593267 TAF1P21675 1872 aa14.2□□□□□ -0.14
CACNA1A-213ENST00000593267 AOX1Q06278 1338 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 MX1P20591 662 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 PDE1AP54750 535 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 ST5P78524 1137 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 TFCP2Q12800 502 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 TAF7LQ5H9L4 462 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 NLRP3Q96P20 1036 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 PUS3Q9BZE2 481 aaKnown RBP14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 GPR108Q9NPR9 543 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 STAP2Q9UGK3 403 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 RIPOR2Q9Y4F9 1068 aa14.19□□□□□ -0.14
CACNA1A-213ENST00000593267 NPHP1O15259 732 aa14.18□□□□□ -0.14
CACNA1A-213ENST00000593267 BMP2KLQ5H9B9 411 aa14.18□□□□□ -0.14
CACNA1A-213ENST00000593267 TTC22Q5TAA0 569 aa14.18□□□□□ -0.14
CACNA1A-213ENST00000593267 SEC31BQ9NQW1 1179 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms