RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
PRKCSH-218ENST00000593053 TWISTNBQ3B726 338 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-218ENST00000593053 EAPPQ56P03 285 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-218ENST00000593053 MPNDQ8N594 471 aa16.85■□□□□ 0.29
PRKCSH-218ENST00000593053 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-218ENST00000593053 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
PRKCSH-218ENST00000593053 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-218ENST00000593053 RTFDC1Q9BY42 306 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-218ENST00000593053 EPHX2P34913 555 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 TMC4Q7Z404 712 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 KLRG1Q96E93 195 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 VPS33BQ9H267 617 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 MAP3K2Q9Y2U5 619 aa16.84■□□□□ 0.29
PRKCSH-218ENST00000593053 PI4KAP2A4QPH2 592 aa16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 PCCAP05165 728 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 KSR2Q6VAB6 950 aa16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 WDR63Q8IWG1 891 aa16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 PI4KAP1Q8N8J0 262 aa16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 FANCIQ9NVI1 1328 aa16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-218ENST00000593053 LAMB2P55268 1798 aa16.82■□□□□ 0.28
PRKCSH-218ENST00000593053 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-218ENST00000593053 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
PRKCSH-218ENST00000593053 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
PRKCSH-218ENST00000593053 KIAA2012Q0VF49 1180 aa16.81■□□□□ 0.28
PRKCSH-218ENST00000593053 G2E3Q7L622 706 aa16.81■□□□□ 0.28
PRKCSH-218ENST00000593053 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-218ENST00000593053 ZNRF3Q9ULT6 936 aa16.81■□□□□ 0.28
PRKCSH-218ENST00000593053 DDX60Q8IY21 1712 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-218ENST00000593053 IGKV5-2P06315 115 aa16.8■□□□□ 0.28
PRKCSH-218ENST00000593053 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
PRKCSH-218ENST00000593053 SCNN1DP51172 638 aa16.8■□□□□ 0.28
PRKCSH-218ENST00000593053 NSFL1CQ9UNZ2 370 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-218ENST00000593053 PDE8AO60658 829 aa16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 EPS15P42566 896 aa16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 RPS8P62241 208 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 EXOSC9Q06265 439 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 CXCL9Q07325 125 aa16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 CCDC85AQ96PX6 553 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 SCN4AP35499 1836 aa16.79■□□□□ 0.28
PRKCSH-218ENST00000593053 GPSM2P81274 684 aa16.78■□□□□ 0.28
PRKCSH-218ENST00000593053 CWF19L2Q2TBE0 894 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-218ENST00000593053 CCDC152Q4G0S7 254 aa16.78■□□□□ 0.28
PRKCSH-218ENST00000593053 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
PRKCSH-218ENST00000593053 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-218ENST00000593053 PASKQ96RG2 1323 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 C6orf229H3BNL8 230 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 VAMP4O75379 141 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 RAD17O75943 681 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 FLIIQ13045 1269 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 COL4A1P02462 1669 aa16.77■□□□□ 0.28
PRKCSH-218ENST00000593053 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.27
PRKCSH-218ENST00000593053 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
PRKCSH-218ENST00000593053 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
PRKCSH-218ENST00000593053 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
PRKCSH-218ENST00000593053 GMPSP49915 693 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-218ENST00000593053 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
PRKCSH-218ENST00000593053 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
PRKCSH-218ENST00000593053 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
PRKCSH-218ENST00000593053 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
PRKCSH-218ENST00000593053 FKBP5Q13451 457 aaPredicted RBP16.75■□□□□ 0.27
PRKCSH-218ENST00000593053 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
PRKCSH-218ENST00000593053 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
PRKCSH-218ENST00000593053 TAF1P21675 1872 aa16.75■□□□□ 0.27
PRKCSH-218ENST00000593053 LRRC37AA6NMS7 1700 aa16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 LTBP1Q14766 1721 aa16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 CTSWP56202 376 aa16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 TNIP1Q15025 636 aa16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 TBC1D16Q8TBP0 767 aa16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 GPR101Q96P66 508 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
PRKCSH-218ENST00000593053 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 DNAAF4Q8WXU2 420 aa16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 EYA3Q99504 573 aa16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 ADARB2Q9NS39 739 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 ANKIB1Q9P2G1 1089 aa16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 MKRN1Q9UHC7 482 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 ADAMTSL1Q8N6G6 1762 aa16.73■□□□□ 0.27
PRKCSH-218ENST00000593053 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
PRKCSH-218ENST00000593053 H7C1W4 665 aa16.72■□□□□ 0.27
PRKCSH-218ENST00000593053 UFL1O94874 794 aa16.72■□□□□ 0.27
PRKCSH-218ENST00000593053 GCKRQ14397 625 aa16.72■□□□□ 0.27
PRKCSH-218ENST00000593053 DOK7Q18PE1 504 aa16.72■□□□□ 0.27
PRKCSH-218ENST00000593053 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
PRKCSH-218ENST00000593053 PODXL2Q9NZ53 605 aa16.72■□□□□ 0.27
PRKCSH-218ENST00000593053 ECE2O60344 883 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms