RNA–Protein interactions for RNA: ENST00000592826.1

APBA3-208, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 2

Gene APBA3, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-208	ENST00000592826	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.52	■■■□□ 2.16
APBA3-208	ENST00000592826	FSTL1	Q12841	308 aa		28.52	■■■□□ 2.16
APBA3-208	ENST00000592826	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.52	■■■□□ 2.16
APBA3-208	ENST00000592826	ALDH1L1	O75891	902 aa		28.51	■■■□□ 2.15
APBA3-208	ENST00000592826	LMNB1	P20700	586 aa		28.51	■■■□□ 2.15
APBA3-208	ENST00000592826	DNAJC5G	Q8N7S2	189 aa		28.51	■■■□□ 2.15
APBA3-208	ENST00000592826	DDX60	Q8IY21	1712 aa	Known RBP	28.51	■■■□□ 2.15
APBA3-208	ENST00000592826	ABCC4	O15439	1325 aa		28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	PPEF1	O14829	653 aa	Predicted RBP	28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	RARS	P54136	660 aa	Known RBP	28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	GRAP	Q13588	217 aa		28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	CCDC152	Q4G0S7	254 aa		28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	GRAPL	Q8TC17	118 aa	Predicted RBP	28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	SRCIN1	Q9C0H9	1055 aa		28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	TAOK3	Q9H2K8	898 aa		28.5	■■■□□ 2.15
APBA3-208	ENST00000592826	NFKBIE	O00221	500 aa		28.49	■■■□□ 2.15
APBA3-208	ENST00000592826	SLC4A10	Q6U841	1118 aa		28.49	■■■□□ 2.15
APBA3-208	ENST00000592826	BCL2L13	Q9BXK5	485 aa		28.49	■■■□□ 2.15
APBA3-208	ENST00000592826	LAMB2	P55268	1798 aa		28.49	■■■□□ 2.15
APBA3-208	ENST00000592826	PLA2G12B	Q9BX93	195 aa		28.48	■■■□□ 2.15
APBA3-208	ENST00000592826	ATP6V0A2	Q9Y487	856 aa		28.48	■■■□□ 2.15
APBA3-208	ENST00000592826	WDR90	Q96KV7	1748 aa		28.48	■■■□□ 2.15
APBA3-208	ENST00000592826	CACNA1S	Q13698	1873 aa		28.48	■■■□□ 2.15
APBA3-208	ENST00000592826	UBE3B	Q7Z3V4	1068 aa		28.47	■■■□□ 2.15
APBA3-208	ENST00000592826	RRAGC	Q9HB90	399 aa		28.47	■■■□□ 2.15
APBA3-208	ENST00000592826	FER1L6	Q2WGJ9	1857 aa		28.46	■■■□□ 2.15
APBA3-208	ENST00000592826	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.46	■■■□□ 2.15
APBA3-208	ENST00000592826	RASSF7	Q02833	373 aa		28.46	■■■□□ 2.15
APBA3-208	ENST00000592826	SP8	Q8IXZ3	490 aa		28.46	■■■□□ 2.15
APBA3-208	ENST00000592826	ARHGAP45	Q92619	1136 aa		28.46	■■■□□ 2.15
APBA3-208	ENST00000592826	KIF16B	Q96L93	1317 aa		28.45	■■■□□ 2.15
APBA3-208	ENST00000592826	CTSW	P56202	376 aa		28.45	■■■□□ 2.14
APBA3-208	ENST00000592826	JARID2	Q92833	1246 aa	Predicted RBP	28.45	■■■□□ 2.14
APBA3-208	ENST00000592826	PSMD1	Q99460	953 aa		28.45	■■■□□ 2.14
APBA3-208	ENST00000592826	API5	Q9BZZ5	524 aa	Known RBP	28.45	■■■□□ 2.14
APBA3-208	ENST00000592826	CASP7	P55210	303 aa		28.44	■■■□□ 2.14
APBA3-208	ENST00000592826	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.44	■■■□□ 2.14
APBA3-208	ENST00000592826	GRM8	O00222	908 aa		28.43	■■■□□ 2.14
APBA3-208	ENST00000592826	IPO8	O15397	1037 aa	Known RBP	28.43	■■■□□ 2.14
APBA3-208	ENST00000592826	NOB1	Q9ULX3	412 aa	Known RBP	28.43	■■■□□ 2.14
APBA3-208	ENST00000592826	RPS8	P62241	208 aa	Known RBP	28.42	■■■□□ 2.14
APBA3-208	ENST00000592826	TTLL11	Q8NHH1	800 aa		28.42	■■■□□ 2.14
APBA3-208	ENST00000592826	RTL9	Q8NET4	1388 aa		28.41	■■■□□ 2.14
APBA3-208	ENST00000592826	SMC1B	Q8NDV3	1235 aa		28.4	■■■□□ 2.14
APBA3-208	ENST00000592826	CDC5L	Q99459	802 aa	Known RBP	28.4	■■■□□ 2.14
APBA3-208	ENST00000592826	VPS33B	Q9H267	617 aa		28.4	■■■□□ 2.14
APBA3-208	ENST00000592826	GLTPD2	A6NH11	291 aa		28.39	■■■□□ 2.14
APBA3-208	ENST00000592826	CCT4	P50991	539 aa	Known RBP	28.39	■■■□□ 2.14
APBA3-208	ENST00000592826	CCDC88A	Q3V6T2	1871 aa		28.39	■■■□□ 2.14
APBA3-208	ENST00000592826	OLFM4	Q6UX06	510 aa		28.39	■■■□□ 2.14
APBA3-208	ENST00000592826	SUPT20H	Q8NEM7	779 aa		28.39	■■■□□ 2.14
APBA3-208	ENST00000592826	SNED1	Q8TER0	1413 aa		28.39	■■■□□ 2.14
APBA3-208	ENST00000592826	CELF1	Q92879	486 aa	Known RBP	28.39	■■■□□ 2.14
APBA3-208	ENST00000592826	CSF1R	P07333	972 aa		28.38	■■■□□ 2.13
APBA3-208	ENST00000592826	PRELP	P51888	382 aa		28.38	■■■□□ 2.13
APBA3-208	ENST00000592826	KLRG1	Q96E93	195 aa		28.38	■■■□□ 2.13
APBA3-208	ENST00000592826	UTY	O14607	1347 aa		28.38	■■■□□ 2.13
APBA3-208	ENST00000592826	VEGFA	P15692	232 aa	Predicted RBP	28.37	■■■□□ 2.13
APBA3-208	ENST00000592826	ANKRD18A	Q8IVF6	992 aa		28.37	■■■□□ 2.13
APBA3-208	ENST00000592826	MPND	Q8N594	471 aa		28.36	■■■□□ 2.13
APBA3-208	ENST00000592826	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.36	■■■□□ 2.13
APBA3-208	ENST00000592826	SEC31B	Q9NQW1	1179 aa		28.36	■■■□□ 2.13
APBA3-208	ENST00000592826	MYH3	P11055	1940 aa		28.35	■■■□□ 2.13
APBA3-208	ENST00000592826	TIAM2	Q8IVF5	1701 aa		28.35	■■■□□ 2.13
APBA3-208	ENST00000592826	IARS	P41252	1262 aa	Known RBP	28.35	■■■□□ 2.13
APBA3-208	ENST00000592826	DPP8	Q6V1X1	898 aa	Predicted RBP	28.35	■■■□□ 2.13
APBA3-208	ENST00000592826	GREM2	Q9H772	168 aa		28.34	■■■□□ 2.13
APBA3-208	ENST00000592826	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.34	■■■□□ 2.13
APBA3-208	ENST00000592826	BCAR3	O75815	825 aa		28.33	■■■□□ 2.13
APBA3-208	ENST00000592826	HTRA3	P83110	453 aa		28.33	■■■□□ 2.13
APBA3-208	ENST00000592826	DPY19L2	Q6NUT2	758 aa		28.33	■■■□□ 2.13
APBA3-208	ENST00000592826	JMY	Q8N9B5	988 aa		28.33	■■■□□ 2.13
APBA3-208	ENST00000592826	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.33	■■■□□ 2.13
APBA3-208	ENST00000592826	HDAC5	Q9UQL6	1122 aa		28.33	■■■□□ 2.13
APBA3-208	ENST00000592826	DICER1	Q9UPY3	1922 aa	Known RBP	28.32	■■■□□ 2.12
APBA3-208	ENST00000592826	FOXO4	P98177	505 aa		28.32	■■■□□ 2.12
APBA3-208	ENST00000592826	BSDC1	Q9NW68	430 aa	Predicted RBP	28.32	■■■□□ 2.12
APBA3-208	ENST00000592826	ITGA6	P23229	1130 aa		28.31	■■■□□ 2.12
APBA3-208	ENST00000592826	IGHMBP2	P38935	993 aa	Known RBP	28.31	■■■□□ 2.12
APBA3-208	ENST00000592826	ATF7IP	Q6VMQ6	1270 aa		28.31	■■■□□ 2.12
APBA3-208	ENST00000592826	JDP2	Q8WYK2	163 aa		28.31	■■■□□ 2.12
APBA3-208	ENST00000592826	ANKRD18B	A2A2Z9	1011 aa		28.3	■■■□□ 2.12
APBA3-208	ENST00000592826	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.3	■■■□□ 2.12
APBA3-208	ENST00000592826	USP44	Q9H0E7	712 aa		28.3	■■■□□ 2.12
APBA3-208	ENST00000592826	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.3	■■■□□ 2.12
APBA3-208	ENST00000592826	TAF1	P21675	1872 aa		28.29	■■■□□ 2.12
APBA3-208	ENST00000592826	IFIT5	Q13325	482 aa	Known RBP	28.29	■■■□□ 2.12
APBA3-208	ENST00000592826	FRAT1	Q92837	279 aa	Predicted RBP	28.29	■■■□□ 2.12
APBA3-208	ENST00000592826	PODXL2	Q9NZ53	605 aa		28.29	■■■□□ 2.12
APBA3-208	ENST00000592826	LRRC37A	A6NMS7	1700 aa		28.29	■■■□□ 2.12
APBA3-208	ENST00000592826	ZKSCAN2	Q63HK3	967 aa		28.28	■■■□□ 2.12
APBA3-208	ENST00000592826	INTS3	Q68E01	1043 aa	Known RBP	28.28	■■■□□ 2.12
APBA3-208	ENST00000592826	LMBR1L	Q6UX01	489 aa		28.28	■■■□□ 2.12
APBA3-208	ENST00000592826	TRIM27	P14373	513 aa		28.27	■■■□□ 2.12
APBA3-208	ENST00000592826	CCDC57	Q2TAC2	916 aa		28.27	■■■□□ 2.12
APBA3-208	ENST00000592826	FAM161A	Q3B820	660 aa		28.27	■■■□□ 2.12
APBA3-208	ENST00000592826	LARGE2	Q8N3Y3	721 aa		28.27	■■■□□ 2.12
APBA3-208	ENST00000592826	MPHOSPH8	Q99549	860 aa		28.27	■■■□□ 2.12
APBA3-208	ENST00000592826	SUCLG2	Q96I99	432 aa		28.26	■■■□□ 2.11
APBA3-208	ENST00000592826	EYA3	Q99504	573 aa		28.26	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms