RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
RANBP3-229ENST00000592771 PLA2G12BQ9BX93 195 aa17.17■□□□□ 0.34
RANBP3-229ENST00000592771 BRD1O95696 1058 aa17.16■□□□□ 0.34
RANBP3-229ENST00000592771 PCCAP05165 728 aaPredicted RBP17.16■□□□□ 0.34
RANBP3-229ENST00000592771 CAVIN1Q6NZI2 390 aaKnown RBP17.16■□□□□ 0.34
RANBP3-229ENST00000592771 RUFY2Q8WXA3 655 aa17.16■□□□□ 0.34
RANBP3-229ENST00000592771 GPR108Q9NPR9 543 aa17.16■□□□□ 0.34
RANBP3-229ENST00000592771 SNRKQ9NRH2 765 aa17.16■□□□□ 0.34
RANBP3-229ENST00000592771 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
RANBP3-229ENST00000592771 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
RANBP3-229ENST00000592771 RREB1Q92766 1687 aa17.16■□□□□ 0.34
RANBP3-229ENST00000592771 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
RANBP3-229ENST00000592771 ZSCAN30Q86W11 494 aa17.15■□□□□ 0.34
RANBP3-229ENST00000592771 HIP1O00291 1037 aa17.15■□□□□ 0.34
RANBP3-229ENST00000592771 PRPF40AO75400 957 aaKnown RBP17.15■□□□□ 0.34
RANBP3-229ENST00000592771 ATP5JP18859 108 aa17.15■□□□□ 0.34
RANBP3-229ENST00000592771 PKP1Q13835 747 aa17.15■□□□□ 0.34
RANBP3-229ENST00000592771 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
RANBP3-229ENST00000592771 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
RANBP3-229ENST00000592771 NAP1L5Q96NT1 182 aaPredicted RBP17.15■□□□□ 0.34
RANBP3-229ENST00000592771 NUP98P52948 1817 aa17.14■□□□□ 0.34
RANBP3-229ENST00000592771 CIAO1O76071 339 aa17.14■□□□□ 0.33
RANBP3-229ENST00000592771 ZBTB1Q9Y2K1 713 aa17.14■□□□□ 0.33
RANBP3-229ENST00000592771 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
RANBP3-229ENST00000592771 IL6STP40189 918 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-229ENST00000592771 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
RANBP3-229ENST00000592771 ZBTB38Q8NAP3 1195 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-229ENST00000592771 SYTL4Q96C24 671 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-229ENST00000592771 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
RANBP3-229ENST00000592771 RFX7Q2KHR2 1363 aa17.13■□□□□ 0.33
RANBP3-229ENST00000592771 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-229ENST00000592771 LRSAM1Q6UWE0 723 aa17.13■□□□□ 0.33
RANBP3-229ENST00000592771 KLHL34Q8N239 644 aa17.13■□□□□ 0.33
RANBP3-229ENST00000592771 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
RANBP3-229ENST00000592771 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
RANBP3-229ENST00000592771 ZNF330Q9Y3S2 320 aaPredicted RBP17.13■□□□□ 0.33
RANBP3-229ENST00000592771 CCDC9Q9Y3X0 531 aaKnown RBP17.13■□□□□ 0.33
RANBP3-229ENST00000592771 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
RANBP3-229ENST00000592771 EYA2O00167 538 aa17.12■□□□□ 0.33
RANBP3-229ENST00000592771 GPT2Q8TD30 523 aa17.12■□□□□ 0.33
RANBP3-229ENST00000592771 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
RANBP3-229ENST00000592771 CHMP3Q9Y3E7 222 aa17.12■□□□□ 0.33
RANBP3-229ENST00000592771 CSF1RP07333 972 aa17.11■□□□□ 0.33
RANBP3-229ENST00000592771 HLFQ16534 295 aa17.11■□□□□ 0.33
RANBP3-229ENST00000592771 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
RANBP3-229ENST00000592771 NLRP10Q86W26 655 aa17.11■□□□□ 0.33
RANBP3-229ENST00000592771 KCNB2Q92953 911 aa17.11■□□□□ 0.33
RANBP3-229ENST00000592771 SYAP1Q96A49 352 aaPredicted RBP17.11■□□□□ 0.33
RANBP3-229ENST00000592771 ZNF609O15014 1411 aa17.11■□□□□ 0.33
RANBP3-229ENST00000592771 DBNDD2Q9BQY9 259 aa17.11■□□□□ 0.33
RANBP3-229ENST00000592771 MYH3P11055 1940 aa17.1■□□□□ 0.33
RANBP3-229ENST00000592771 USP21Q9UK80 565 aa17.1■□□□□ 0.33
RANBP3-229ENST00000592771 SNX14Q9Y5W7 946 aa17.1■□□□□ 0.33
RANBP3-229ENST00000592771 BCL9LQ86UU0 1499 aa17.1■□□□□ 0.33
RANBP3-229ENST00000592771 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
RANBP3-229ENST00000592771 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
RANBP3-229ENST00000592771 TPM2P07951 284 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 NMIQ13287 307 aaPredicted RBP17.09■□□□□ 0.33
RANBP3-229ENST00000592771 FNBP4Q8N3X1 1017 aaPredicted RBP17.09■□□□□ 0.33
RANBP3-229ENST00000592771 HAUS7Q99871 368 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 MSNP26038 577 aaKnown RBP17.09■□□□□ 0.33
RANBP3-229ENST00000592771 MCM5P33992 734 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 TERF1P54274 439 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
RANBP3-229ENST00000592771 PTH1RQ03431 593 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 INTS5Q6P9B9 1019 aaKnown RBP17.09■□□□□ 0.33
RANBP3-229ENST00000592771 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 CCDC171Q6TFL3 1326 aa17.09■□□□□ 0.33
RANBP3-229ENST00000592771 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
RANBP3-229ENST00000592771 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.33
RANBP3-229ENST00000592771 VPS72Q15906 364 aa17.08■□□□□ 0.33
RANBP3-229ENST00000592771 LRRC24Q50LG9 513 aa17.08■□□□□ 0.33
RANBP3-229ENST00000592771 ZNF594Q96JF6 807 aaPredicted RBP17.08■□□□□ 0.33
RANBP3-229ENST00000592771 FAM227BQ96M60 508 aa17.08■□□□□ 0.33
RANBP3-229ENST00000592771 PHF14O94880 888 aa17.08■□□□□ 0.32
RANBP3-229ENST00000592771 CCDC57Q2TAC2 916 aa17.08■□□□□ 0.32
RANBP3-229ENST00000592771 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
RANBP3-229ENST00000592771 DZIP3Q86Y13 1208 aaKnown RBP17.08■□□□□ 0.32
RANBP3-229ENST00000592771 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
RANBP3-229ENST00000592771 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.32
RANBP3-229ENST00000592771 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
RANBP3-229ENST00000592771 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 A0A0D9SFI3 127 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 SIK1P57059 783 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 ZNF34Q8IZ26 560 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 ACSBG1Q96GR2 724 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
RANBP3-229ENST00000592771 TMEM63CQ9P1W3 806 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 NOL7Q9UMY1 257 aaKnown RBP17.07■□□□□ 0.32
RANBP3-229ENST00000592771 AFF2P51816 1311 aa17.07■□□□□ 0.32
RANBP3-229ENST00000592771 GPTP24298 496 aa17.06■□□□□ 0.32
RANBP3-229ENST00000592771 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
RANBP3-229ENST00000592771 MAP4K1Q92918 833 aa17.06■□□□□ 0.32
RANBP3-229ENST00000592771 TTC14Q96N46 770 aa17.06■□□□□ 0.32
RANBP3-229ENST00000592771 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
RANBP3-229ENST00000592771 PALLDQ8WX93 1383 aa17.06■□□□□ 0.32
RANBP3-229ENST00000592771 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms