RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 TIAM2Q8IVF5 1701 aa18.49■□□□□ 0.55
DDX39A-217ENST00000592391 GCKRQ14397 625 aa18.49■□□□□ 0.55
DDX39A-217ENST00000592391 TMC4Q7Z404 712 aa18.49■□□□□ 0.55
DDX39A-217ENST00000592391 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
DDX39A-217ENST00000592391 MRPL50Q8N5N7 158 aaKnown RBP18.49■□□□□ 0.55
DDX39A-217ENST00000592391 CCDC88AQ3V6T2 1871 aa18.49■□□□□ 0.55
DDX39A-217ENST00000592391 H7C1W4 665 aa18.48■□□□□ 0.55
DDX39A-217ENST00000592391 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-217ENST00000592391 CCDC152Q4G0S7 254 aa18.48■□□□□ 0.55
DDX39A-217ENST00000592391 SSH1Q8WYL5 1049 aa18.48■□□□□ 0.55
DDX39A-217ENST00000592391 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
DDX39A-217ENST00000592391 GLTPD2A6NH11 291 aa18.47■□□□□ 0.55
DDX39A-217ENST00000592391 KIF3CO14782 793 aa18.47■□□□□ 0.55
DDX39A-217ENST00000592391 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
DDX39A-217ENST00000592391 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
DDX39A-217ENST00000592391 ALDH1L2Q3SY69 923 aa18.47■□□□□ 0.55
DDX39A-217ENST00000592391 BEND3Q5T5X7 828 aa18.47■□□□□ 0.55
DDX39A-217ENST00000592391 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
DDX39A-217ENST00000592391 CELF1Q92879 486 aaKnown RBP18.47■□□□□ 0.55
DDX39A-217ENST00000592391 NMRK2Q9NPI5 230 aa18.47■□□□□ 0.55
DDX39A-217ENST00000592391 CTSWP56202 376 aa18.46■□□□□ 0.55
DDX39A-217ENST00000592391 DPY19L2Q6NUT2 758 aa18.46■□□□□ 0.55
DDX39A-217ENST00000592391 CASP7P55210 303 aa18.45■□□□□ 0.54
DDX39A-217ENST00000592391 C1QTNF8P60827 252 aa18.45■□□□□ 0.54
DDX39A-217ENST00000592391 SEC31BQ9NQW1 1179 aa18.45■□□□□ 0.54
DDX39A-217ENST00000592391 PTPRCP08575 1304 aa18.45■□□□□ 0.54
DDX39A-217ENST00000592391 TAF1P21675 1872 aa18.44■□□□□ 0.54
DDX39A-217ENST00000592391 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
DDX39A-217ENST00000592391 DPP8Q6V1X1 898 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-217ENST00000592391 MPNDQ8N594 471 aa18.44■□□□□ 0.54
DDX39A-217ENST00000592391 PLA2G12BQ9BX93 195 aa18.44■□□□□ 0.54
DDX39A-217ENST00000592391 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
DDX39A-217ENST00000592391 RTFDC1Q9BY42 306 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-217ENST00000592391 COL4A1P02462 1669 aa18.44■□□□□ 0.54
DDX39A-217ENST00000592391 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
DDX39A-217ENST00000592391 SUPT20HQ8NEM7 779 aa18.43■□□□□ 0.54
DDX39A-217ENST00000592391 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
DDX39A-217ENST00000592391 CCDC85AQ96PX6 553 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-217ENST00000592391 VPS33BQ9H267 617 aa18.43■□□□□ 0.54
DDX39A-217ENST00000592391 RRAGCQ9HB90 399 aa18.43■□□□□ 0.54
DDX39A-217ENST00000592391 SMC4Q9NTJ3 1288 aa18.43■□□□□ 0.54
DDX39A-217ENST00000592391 LRRC37AA6NMS7 1700 aa18.43■□□□□ 0.54
DDX39A-217ENST00000592391 ALDH1L1O75891 902 aa18.42■□□□□ 0.54
DDX39A-217ENST00000592391 JDP2Q8WYK2 163 aa18.42■□□□□ 0.54
DDX39A-217ENST00000592391 SRCIN1Q9C0H9 1055 aa18.42■□□□□ 0.54
DDX39A-217ENST00000592391 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
DDX39A-217ENST00000592391 FZD9O00144 591 aa18.41■□□□□ 0.54
DDX39A-217ENST00000592391 LARGE2Q8N3Y3 721 aa18.41■□□□□ 0.54
DDX39A-217ENST00000592391 GREM2Q9H772 168 aa18.41■□□□□ 0.54
DDX39A-217ENST00000592391 GRM8O00222 908 aa18.4■□□□□ 0.54
DDX39A-217ENST00000592391 PPIP5K2O43314 1243 aa18.4■□□□□ 0.54
DDX39A-217ENST00000592391 DDNO94850 711 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-217ENST00000592391 AOC3Q16853 763 aa18.4■□□□□ 0.54
DDX39A-217ENST00000592391 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
DDX39A-217ENST00000592391 CDC5LQ99459 802 aaKnown RBP18.4■□□□□ 0.54
DDX39A-217ENST00000592391 NSFL1CQ9UNZ2 370 aaKnown RBP18.4■□□□□ 0.54
DDX39A-217ENST00000592391 COL4A5P29400 1685 aa18.4■□□□□ 0.54
DDX39A-217ENST00000592391 DUOX1Q9NRD9 1551 aa18.39■□□□□ 0.53
DDX39A-217ENST00000592391 TOMM70O94826 608 aa18.39■□□□□ 0.53
DDX39A-217ENST00000592391 CSF1RP07333 972 aa18.39■□□□□ 0.53
DDX39A-217ENST00000592391 VEGFAP15692 232 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-217ENST00000592391 BRPF1P55201 1214 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-217ENST00000592391 GPSM2P81274 684 aa18.39■□□□□ 0.53
DDX39A-217ENST00000592391 C9orf78Q9NZ63 289 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-217ENST00000592391 ZNF541Q9H0D2 1346 aa18.39■□□□□ 0.53
DDX39A-217ENST00000592391 WDR90Q96KV7 1748 aa18.38■□□□□ 0.53
DDX39A-217ENST00000592391 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
DDX39A-217ENST00000592391 KIAA2012Q0VF49 1180 aa18.38■□□□□ 0.53
DDX39A-217ENST00000592391 NIM1KQ8IY84 436 aa18.38■□□□□ 0.53
DDX39A-217ENST00000592391 C16orf71Q8IYS4 520 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-217ENST00000592391 MYH3P11055 1940 aa18.38■□□□□ 0.53
DDX39A-217ENST00000592391 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
DDX39A-217ENST00000592391 POTECB2RU33 542 aa18.37■□□□□ 0.53
DDX39A-217ENST00000592391 EIF6P56537 245 aaKnown RBP18.37■□□□□ 0.53
DDX39A-217ENST00000592391 PODXL2Q9NZ53 605 aa18.37■□□□□ 0.53
DDX39A-217ENST00000592391 ITGA6P23229 1130 aa18.36■□□□□ 0.53
DDX39A-217ENST00000592391 FOXO4P98177 505 aa18.36■□□□□ 0.53
DDX39A-217ENST00000592391 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
DDX39A-217ENST00000592391 L3MBTL3Q96JM7 780 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-217ENST00000592391 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-217ENST00000592391 POLLQ9UGP5 575 aa18.36■□□□□ 0.53
DDX39A-217ENST00000592391 NOB1Q9ULX3 412 aaKnown RBP18.36■□□□□ 0.53
DDX39A-217ENST00000592391 LTBP1Q14766 1721 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 UTYO14607 1347 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 GPC2Q8N158 579 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 RBM46Q8TBY0 533 aaKnown RBP18.35■□□□□ 0.53
DDX39A-217ENST00000592391 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 ZNRF3Q9ULT6 936 aa18.35■□□□□ 0.53
DDX39A-217ENST00000592391 KIF16BQ96L93 1317 aa18.34■□□□□ 0.53
DDX39A-217ENST00000592391 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
DDX39A-217ENST00000592391 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
DDX39A-217ENST00000592391 EYA3Q99504 573 aa18.34■□□□□ 0.53
DDX39A-217ENST00000592391 XDHP47989 1333 aa18.33■□□□□ 0.53
DDX39A-217ENST00000592391 ANKRD18BA2A2Z9 1011 aa18.33■□□□□ 0.52
DDX39A-217ENST00000592391 IQCA1LA6NCM1 817 aa18.33■□□□□ 0.52
DDX39A-217ENST00000592391 NBPF7P0C2Y1 421 aaPredicted RBP18.33■□□□□ 0.52
DDX39A-217ENST00000592391 LMBR1LQ6UX01 489 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms