RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
VMP1-214ENST00000592106 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 BBOX1O75936 387 aa13.16□□□□□ -0.3
VMP1-214ENST00000592106 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
VMP1-214ENST00000592106 PLBD2Q8NHP8 589 aa13.16□□□□□ -0.3
VMP1-214ENST00000592106 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
VMP1-214ENST00000592106 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
VMP1-214ENST00000592106 TMEM88BA6NKF7 163 aa13.15□□□□□ -0.3
VMP1-214ENST00000592106 GRAPQ13588 217 aa13.15□□□□□ -0.3
VMP1-214ENST00000592106 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
VMP1-214ENST00000592106 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
VMP1-214ENST00000592106 GRAPLQ8TC17 118 aaPredicted RBP13.15□□□□□ -0.3
VMP1-214ENST00000592106 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
VMP1-214ENST00000592106 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
VMP1-214ENST00000592106 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
VMP1-214ENST00000592106 LAMB2P55268 1798 aa13.15□□□□□ -0.31
VMP1-214ENST00000592106 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.31
VMP1-214ENST00000592106 SLC34A2O95436 690 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 HCLS1P14317 486 aaPredicted RBP13.14□□□□□ -0.31
VMP1-214ENST00000592106 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
VMP1-214ENST00000592106 GNAI1P63096 354 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 AOC3Q16853 763 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 DUSP27Q5VZP5 1158 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 SP8Q8IXZ3 490 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 MPNDQ8N594 471 aa13.14□□□□□ -0.31
VMP1-214ENST00000592106 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
VMP1-214ENST00000592106 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
VMP1-214ENST00000592106 MIER1Q8N108 512 aa13.13□□□□□ -0.31
VMP1-214ENST00000592106 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
VMP1-214ENST00000592106 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
VMP1-214ENST00000592106 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
VMP1-214ENST00000592106 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
VMP1-214ENST00000592106 COL4A5P29400 1685 aa13.12□□□□□ -0.31
VMP1-214ENST00000592106 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
VMP1-214ENST00000592106 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
VMP1-214ENST00000592106 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
VMP1-214ENST00000592106 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
VMP1-214ENST00000592106 SCNN1DP51172 638 aa13.11□□□□□ -0.31
VMP1-214ENST00000592106 KIAA2012Q0VF49 1180 aa13.11□□□□□ -0.31
VMP1-214ENST00000592106 MAP1SQ66K74 1059 aaPredicted RBP13.11□□□□□ -0.31
VMP1-214ENST00000592106 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
VMP1-214ENST00000592106 TNS4Q8IZW8 715 aa13.11□□□□□ -0.31
VMP1-214ENST00000592106 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
VMP1-214ENST00000592106 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
VMP1-214ENST00000592106 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
VMP1-214ENST00000592106 APAF1O14727 1248 aa13.1□□□□□ -0.31
VMP1-214ENST00000592106 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
VMP1-214ENST00000592106 TNIP1Q15025 636 aa13.1□□□□□ -0.31
VMP1-214ENST00000592106 COL13A1Q5TAT6 717 aaPredicted RBP13.1□□□□□ -0.31
VMP1-214ENST00000592106 CIAPIN1Q6FI81 312 aa13.1□□□□□ -0.31
VMP1-214ENST00000592106 ADARB2Q9NS39 739 aaKnown RBP13.1□□□□□ -0.31
VMP1-214ENST00000592106 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
VMP1-214ENST00000592106 LRRC37AA6NMS7 1700 aa13.1□□□□□ -0.31
VMP1-214ENST00000592106 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
VMP1-214ENST00000592106 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
VMP1-214ENST00000592106 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
VMP1-214ENST00000592106 EPS15P42566 896 aa13.09□□□□□ -0.31
VMP1-214ENST00000592106 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
VMP1-214ENST00000592106 LTBP1Q14766 1721 aa13.09□□□□□ -0.31
VMP1-214ENST00000592106 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
VMP1-214ENST00000592106 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
VMP1-214ENST00000592106 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
VMP1-214ENST00000592106 GPRC5DQ9NZD1 345 aa13.09□□□□□ -0.31
VMP1-214ENST00000592106 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
VMP1-214ENST00000592106 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
VMP1-214ENST00000592106 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
VMP1-214ENST00000592106 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.32
VMP1-214ENST00000592106 CCDC30Q5VVM6 783 aa13.08□□□□□ -0.32
VMP1-214ENST00000592106 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
VMP1-214ENST00000592106 EYA3Q99504 573 aa13.08□□□□□ -0.32
VMP1-214ENST00000592106 ECE1P42892 770 aa13.07□□□□□ -0.32
VMP1-214ENST00000592106 GMPSP49915 693 aaPredicted RBP13.07□□□□□ -0.32
VMP1-214ENST00000592106 CXCL9Q07325 125 aa13.07□□□□□ -0.32
VMP1-214ENST00000592106 ZBTB38Q8NAP3 1195 aaPredicted RBP13.07□□□□□ -0.32
VMP1-214ENST00000592106 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
VMP1-214ENST00000592106 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
VMP1-214ENST00000592106 CTCFP49711 727 aaPredicted RBP13.06□□□□□ -0.32
VMP1-214ENST00000592106 VEGFBP49765 207 aa13.06□□□□□ -0.32
VMP1-214ENST00000592106 WASHC4Q2M389 1173 aa13.06□□□□□ -0.32
VMP1-214ENST00000592106 CCDC152Q4G0S7 254 aa13.06□□□□□ -0.32
VMP1-214ENST00000592106 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
VMP1-214ENST00000592106 PAXIP1Q6ZW49 1069 aaPredicted RBP13.06□□□□□ -0.32
VMP1-214ENST00000592106 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
VMP1-214ENST00000592106 MYD88Q99836 296 aa13.06□□□□□ -0.32
VMP1-214ENST00000592106 STK31Q9BXU1 1019 aa13.06□□□□□ -0.32
VMP1-214ENST00000592106 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
VMP1-214ENST00000592106 NSFL1CQ9UNZ2 370 aaKnown RBP13.06□□□□□ -0.32
VMP1-214ENST00000592106 H7C1D1 291 aa13.05□□□□□ -0.32
VMP1-214ENST00000592106 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
VMP1-214ENST00000592106 RAD17O75943 681 aa13.05□□□□□ -0.32
VMP1-214ENST00000592106 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
VMP1-214ENST00000592106 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
VMP1-214ENST00000592106 ZNF428Q96B54 188 aa13.05□□□□□ -0.32
VMP1-214ENST00000592106 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms