RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
CLIP3-205ENST00000592017 LARGE2Q8N3Y3 721 aa17.82■□□□□ 0.44
CLIP3-205ENST00000592017 JDP2Q8WYK2 163 aa17.82■□□□□ 0.44
CLIP3-205ENST00000592017 METTL22Q9BUU2 404 aaPredicted RBP17.82■□□□□ 0.44
CLIP3-205ENST00000592017 TAF1DQ9H5J8 278 aaPredicted RBP17.82■□□□□ 0.44
CLIP3-205ENST00000592017 COL4A5P29400 1685 aa17.82■□□□□ 0.44
CLIP3-205ENST00000592017 PI4KAP2A4QPH2 592 aa17.81■□□□□ 0.44
CLIP3-205ENST00000592017 FLIIQ13045 1269 aa17.81■□□□□ 0.44
CLIP3-205ENST00000592017 PI4KAP1Q8N8J0 262 aa17.81■□□□□ 0.44
CLIP3-205ENST00000592017 ZBTB38Q8NAP3 1195 aaPredicted RBP17.81■□□□□ 0.44
CLIP3-205ENST00000592017 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
CLIP3-205ENST00000592017 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
CLIP3-205ENST00000592017 RTFDC1Q9BY42 306 aaPredicted RBP17.81■□□□□ 0.44
CLIP3-205ENST00000592017 TMX4Q9H1E5 349 aaPredicted RBP17.81■□□□□ 0.44
CLIP3-205ENST00000592017 IQCA1LA6NCM1 817 aa17.8■□□□□ 0.44
CLIP3-205ENST00000592017 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
CLIP3-205ENST00000592017 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
CLIP3-205ENST00000592017 KSR2Q6VAB6 950 aa17.8■□□□□ 0.44
CLIP3-205ENST00000592017 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
CLIP3-205ENST00000592017 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
CLIP3-205ENST00000592017 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
CLIP3-205ENST00000592017 PPIP5K2O43314 1243 aa17.79■□□□□ 0.44
CLIP3-205ENST00000592017 AOC3Q16853 763 aa17.79■□□□□ 0.44
CLIP3-205ENST00000592017 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
CLIP3-205ENST00000592017 DPP8Q6V1X1 898 aaPredicted RBP17.79■□□□□ 0.44
CLIP3-205ENST00000592017 GPC2Q8N158 579 aa17.79■□□□□ 0.44
CLIP3-205ENST00000592017 MPNDQ8N594 471 aa17.79■□□□□ 0.44
CLIP3-205ENST00000592017 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
CLIP3-205ENST00000592017 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
CLIP3-205ENST00000592017 IGKV5-2P06315 115 aa17.78■□□□□ 0.44
CLIP3-205ENST00000592017 EIF6P56537 245 aaKnown RBP17.78■□□□□ 0.44
CLIP3-205ENST00000592017 NEXNQ0ZGT2 675 aa17.78■□□□□ 0.44
CLIP3-205ENST00000592017 NIM1KQ8IY84 436 aa17.78■□□□□ 0.44
CLIP3-205ENST00000592017 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
CLIP3-205ENST00000592017 GJA3Q9Y6H8 435 aa17.78■□□□□ 0.44
CLIP3-205ENST00000592017 TMC4Q7Z404 712 aa17.77■□□□□ 0.44
CLIP3-205ENST00000592017 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
CLIP3-205ENST00000592017 VPS33BQ9H267 617 aa17.77■□□□□ 0.44
CLIP3-205ENST00000592017 EPHX2P34913 555 aa17.76■□□□□ 0.43
CLIP3-205ENST00000592017 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLIP3-205ENST00000592017 LDHDQ86WU2 507 aa17.76■□□□□ 0.43
CLIP3-205ENST00000592017 SEC31BQ9NQW1 1179 aa17.76■□□□□ 0.43
CLIP3-205ENST00000592017 RPS8P62241 208 aaKnown RBP17.75■□□□□ 0.43
CLIP3-205ENST00000592017 KIAA2012Q0VF49 1180 aa17.75■□□□□ 0.43
CLIP3-205ENST00000592017 CWF19L2Q2TBE0 894 aaKnown RBP17.75■□□□□ 0.43
CLIP3-205ENST00000592017 EAPPQ56P03 285 aaPredicted RBP17.75■□□□□ 0.43
CLIP3-205ENST00000592017 DNAAF4Q8WXU2 420 aa17.75■□□□□ 0.43
CLIP3-205ENST00000592017 ZNRF3Q9ULT6 936 aa17.75■□□□□ 0.43
CLIP3-205ENST00000592017 SCNN1DP51172 638 aa17.74■□□□□ 0.43
CLIP3-205ENST00000592017 GPSM2P81274 684 aa17.74■□□□□ 0.43
CLIP3-205ENST00000592017 CXCL9Q07325 125 aa17.74■□□□□ 0.43
CLIP3-205ENST00000592017 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
CLIP3-205ENST00000592017 COL4A1P02462 1669 aa17.74■□□□□ 0.43
CLIP3-205ENST00000592017 NEURL1BA8MQ27 555 aa17.73■□□□□ 0.43
CLIP3-205ENST00000592017 F6X3S4 739 aa17.73■□□□□ 0.43
CLIP3-205ENST00000592017 PDE8AO60658 829 aa17.73■□□□□ 0.43
CLIP3-205ENST00000592017 HSP90B1P14625 803 aaKnown RBP17.73■□□□□ 0.43
CLIP3-205ENST00000592017 EPS15P42566 896 aa17.73■□□□□ 0.43
CLIP3-205ENST00000592017 CCDC85AQ96PX6 553 aaPredicted RBP17.73■□□□□ 0.43
CLIP3-205ENST00000592017 BCL2L13Q9BXK5 485 aa17.73■□□□□ 0.43
CLIP3-205ENST00000592017 POLLQ9UGP5 575 aa17.73■□□□□ 0.43
CLIP3-205ENST00000592017 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
CLIP3-205ENST00000592017 LAMB2P55268 1798 aa17.72■□□□□ 0.43
CLIP3-205ENST00000592017 ITGBL1O95965 494 aaPredicted RBP17.72■□□□□ 0.43
CLIP3-205ENST00000592017 CCDC152Q4G0S7 254 aa17.72■□□□□ 0.43
CLIP3-205ENST00000592017 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
CLIP3-205ENST00000592017 H7C1W4 665 aa17.71■□□□□ 0.43
CLIP3-205ENST00000592017 PNMA8AQ86V59 439 aaPredicted RBP17.71■□□□□ 0.43
CLIP3-205ENST00000592017 TRMT2AQ8IZ69 625 aaKnown RBP17.71■□□□□ 0.43
CLIP3-205ENST00000592017 DDX60Q8IY21 1712 aaKnown RBP17.71■□□□□ 0.43
CLIP3-205ENST00000592017 CDHR2Q9BYE9 1310 aa17.71■□□□□ 0.42
CLIP3-205ENST00000592017 YDJCA8MPS7 323 aa17.7■□□□□ 0.42
CLIP3-205ENST00000592017 RAD17O75943 681 aa17.7■□□□□ 0.42
CLIP3-205ENST00000592017 LMOD1P29536 600 aaPredicted RBP17.7■□□□□ 0.42
CLIP3-205ENST00000592017 MAP1SQ66K74 1059 aaPredicted RBP17.7■□□□□ 0.42
CLIP3-205ENST00000592017 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
CLIP3-205ENST00000592017 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
CLIP3-205ENST00000592017 JMYQ8N9B5 988 aa17.7■□□□□ 0.42
CLIP3-205ENST00000592017 SSH1Q8WYL5 1049 aa17.7■□□□□ 0.42
CLIP3-205ENST00000592017 GPR101Q96P66 508 aaPredicted RBP17.7■□□□□ 0.42
CLIP3-205ENST00000592017 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
CLIP3-205ENST00000592017 PASKQ96RG2 1323 aa17.7■□□□□ 0.42
CLIP3-205ENST00000592017 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 RIMBP2O15034 1052 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 GMPSP49915 693 aaPredicted RBP17.69■□□□□ 0.42
CLIP3-205ENST00000592017 CTSWP56202 376 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 GCKRQ14397 625 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 WASHC4Q2M389 1173 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 CIAPIN1Q6FI81 312 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 UBE3BQ7Z3V4 1068 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 LINS1Q8NG48 757 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
CLIP3-205ENST00000592017 TAF1P21675 1872 aa17.68■□□□□ 0.42
CLIP3-205ENST00000592017 CNTROBQ8N137 903 aa17.68■□□□□ 0.42
CLIP3-205ENST00000592017 GPRC5DQ9NZD1 345 aa17.68■□□□□ 0.42
CLIP3-205ENST00000592017 CASP7P55210 303 aa17.67■□□□□ 0.42
CLIP3-205ENST00000592017 TNIP1Q15025 636 aa17.67■□□□□ 0.42
CLIP3-205ENST00000592017 GREM2Q9H772 168 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms