RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 DDX46Q7L014 1031 aaKnown RBP14.67□□□□□ -0.06
VMP1-211ENST00000591315 ZNF277Q9NRM2 450 aaPredicted RBP14.67□□□□□ -0.06
VMP1-211ENST00000591315 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
VMP1-211ENST00000591315 LMNB1P20700 586 aa14.66□□□□□ -0.06
VMP1-211ENST00000591315 GRAPQ13588 217 aa14.66□□□□□ -0.06
VMP1-211ENST00000591315 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
VMP1-211ENST00000591315 GRAPLQ8TC17 118 aaPredicted RBP14.66□□□□□ -0.06
VMP1-211ENST00000591315 TAOK3Q9H2K8 898 aa14.66□□□□□ -0.06
VMP1-211ENST00000591315 CDHR2Q9BYE9 1310 aa14.66□□□□□ -0.06
VMP1-211ENST00000591315 PDE8AO60658 829 aa14.65□□□□□ -0.06
VMP1-211ENST00000591315 BCAR3O75815 825 aa14.65□□□□□ -0.06
VMP1-211ENST00000591315 NOB1Q9ULX3 412 aaKnown RBP14.65□□□□□ -0.06
VMP1-211ENST00000591315 TNNQ9UQP3 1299 aa14.65□□□□□ -0.06
VMP1-211ENST00000591315 CTSWP56202 376 aa14.64□□□□□ -0.07
VMP1-211ENST00000591315 FKBP4Q02790 459 aaKnown RBP eCLIP14.64□□□□□ -0.07
VMP1-211ENST00000591315 EPHA10Q5JZY3 1008 aa14.64□□□□□ -0.07
VMP1-211ENST00000591315 TTLL11Q8NHH1 800 aa14.64□□□□□ -0.07
VMP1-211ENST00000591315 GREM2Q9H772 168 aa14.64□□□□□ -0.07
VMP1-211ENST00000591315 ATP6V0A2Q9Y487 856 aa14.64□□□□□ -0.07
VMP1-211ENST00000591315 MYH3P11055 1940 aa14.64□□□□□ -0.07
VMP1-211ENST00000591315 DICER1Q9UPY3 1922 aaKnown RBP14.64□□□□□ -0.07
VMP1-211ENST00000591315 LTBP3Q9NS15 1303 aa14.64□□□□□ -0.07
VMP1-211ENST00000591315 COL4A5P29400 1685 aa14.63□□□□□ -0.07
VMP1-211ENST00000591315 BBOX1O75936 387 aa14.63□□□□□ -0.07
VMP1-211ENST00000591315 CT47B1P0C2W7 299 aaPredicted RBP14.63□□□□□ -0.07
VMP1-211ENST00000591315 SOGA3Q5TF21 947 aa14.63□□□□□ -0.07
VMP1-211ENST00000591315 RTKN2Q8IZC4 609 aa14.63□□□□□ -0.07
VMP1-211ENST00000591315 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
VMP1-211ENST00000591315 PTPRCP08575 1304 aa14.63□□□□□ -0.07
VMP1-211ENST00000591315 RPS8P62241 208 aaKnown RBP14.62□□□□□ -0.07
VMP1-211ENST00000591315 CCDC152Q4G0S7 254 aa14.62□□□□□ -0.07
VMP1-211ENST00000591315 SP8Q8IXZ3 490 aa14.62□□□□□ -0.07
VMP1-211ENST00000591315 TIAM2Q8IVF5 1701 aa14.61□□□□□ -0.07
VMP1-211ENST00000591315 GRM8O00222 908 aa14.61□□□□□ -0.07
VMP1-211ENST00000591315 ALDH1L1O75891 902 aa14.61□□□□□ -0.07
VMP1-211ENST00000591315 NBPF7P0C2Y1 421 aaPredicted RBP14.61□□□□□ -0.07
VMP1-211ENST00000591315 FOXO4P98177 505 aa14.61□□□□□ -0.07
VMP1-211ENST00000591315 FAM161AQ3B820 660 aa14.61□□□□□ -0.07
VMP1-211ENST00000591315 GPR101Q96P66 508 aaPredicted RBP14.61□□□□□ -0.07
VMP1-211ENST00000591315 NMRK2Q9NPI5 230 aa14.61□□□□□ -0.07
VMP1-211ENST00000591315 SPEF2Q9C093 1822 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 WTIPA6NIX2 430 aaPredicted RBP14.6□□□□□ -0.07
VMP1-211ENST00000591315 IARSP41252 1262 aaKnown RBP14.6□□□□□ -0.07
VMP1-211ENST00000591315 BRPF1P55201 1214 aaPredicted RBP14.6□□□□□ -0.07
VMP1-211ENST00000591315 GPSM2P81274 684 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 CC2D2BQ6DHV5 1058 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 CNKSR2Q8WXI2 1034 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 KAZALD1Q96I82 304 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 SUCLG2Q96I99 432 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 PSMD1Q99460 953 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 PLA2G12BQ9BX93 195 aa14.6□□□□□ -0.07
VMP1-211ENST00000591315 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
VMP1-211ENST00000591315 LRRC37AA6NMS7 1700 aa14.59□□□□□ -0.07
VMP1-211ENST00000591315 CSF1RP07333 972 aa14.59□□□□□ -0.07
VMP1-211ENST00000591315 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
VMP1-211ENST00000591315 DPP8Q6V1X1 898 aaPredicted RBP14.59□□□□□ -0.07
VMP1-211ENST00000591315 MPNDQ8N594 471 aa14.59□□□□□ -0.07
VMP1-211ENST00000591315 GPBP1L1Q9HC44 474 aaPredicted RBP14.59□□□□□ -0.07
VMP1-211ENST00000591315 DUOX1Q9NRD9 1551 aa14.59□□□□□ -0.07
VMP1-211ENST00000591315 LMBR1LQ6UX01 489 aa14.58□□□□□ -0.08
VMP1-211ENST00000591315 FRAT1Q92837 279 aaPredicted RBP14.58□□□□□ -0.08
VMP1-211ENST00000591315 USP44Q9H0E7 712 aa14.58□□□□□ -0.08
VMP1-211ENST00000591315 ZNF541Q9H0D2 1346 aa14.58□□□□□ -0.08
VMP1-211ENST00000591315 ITGA6P23229 1130 aa14.57□□□□□ -0.08
VMP1-211ENST00000591315 AOC3Q16853 763 aa14.57□□□□□ -0.08
VMP1-211ENST00000591315 ANKRD18AQ8IVF6 992 aa14.57□□□□□ -0.08
VMP1-211ENST00000591315 RTFDC1Q9BY42 306 aaPredicted RBP14.57□□□□□ -0.08
VMP1-211ENST00000591315 POLLQ9UGP5 575 aa14.57□□□□□ -0.08
VMP1-211ENST00000591315 NSFL1CQ9UNZ2 370 aaKnown RBP14.57□□□□□ -0.08
VMP1-211ENST00000591315 CHMP3Q9Y3E7 222 aa14.57□□□□□ -0.08
VMP1-211ENST00000591315 LTBP1Q14766 1721 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 KIF3CO14782 793 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 PPIP5K2O43314 1243 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 DDNO94850 711 aaPredicted RBP14.56□□□□□ -0.08
VMP1-211ENST00000591315 LARGE2Q8N3Y3 721 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 CLUAP1Q96AJ1 413 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 ZNF594Q96JF6 807 aaPredicted RBP14.56□□□□□ -0.08
VMP1-211ENST00000591315 YTHDC1Q96MU7 727 aaKnown RBP14.56□□□□□ -0.08
VMP1-211ENST00000591315 API5Q9BZZ5 524 aaKnown RBP14.56□□□□□ -0.08
VMP1-211ENST00000591315 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 UTYO14607 1347 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 RTL9Q8NET4 1388 aa14.56□□□□□ -0.08
VMP1-211ENST00000591315 GLTPD2A6NH11 291 aa14.55□□□□□ -0.08
VMP1-211ENST00000591315 POTECB2RU33 542 aa14.55□□□□□ -0.08
VMP1-211ENST00000591315 RIMBP2O15034 1052 aa14.55□□□□□ -0.08
VMP1-211ENST00000591315 TRIM27P14373 513 aa14.55□□□□□ -0.08
VMP1-211ENST00000591315 TMC4Q7Z404 712 aa14.55□□□□□ -0.08
VMP1-211ENST00000591315 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
VMP1-211ENST00000591315 TMX4Q9H1E5 349 aaPredicted RBP14.55□□□□□ -0.08
VMP1-211ENST00000591315 BICC1Q9H694 974 aaKnown RBP14.55□□□□□ -0.08
VMP1-211ENST00000591315 C6orf229H3BNL8 230 aa14.54□□□□□ -0.08
VMP1-211ENST00000591315 FZD9O00144 591 aa14.54□□□□□ -0.08
VMP1-211ENST00000591315 TBC1D16Q8TBP0 767 aa14.54□□□□□ -0.08
VMP1-211ENST00000591315 CDC5LQ99459 802 aaKnown RBP14.54□□□□□ -0.08
VMP1-211ENST00000591315 MINPP1Q9UNW1 487 aa14.54□□□□□ -0.08
VMP1-211ENST00000591315 KIF16BQ96L93 1317 aa14.54□□□□□ -0.08
VMP1-211ENST00000591315 ZC3H4Q9UPT8 1303 aaKnown RBP14.54□□□□□ -0.08
VMP1-211ENST00000591315 SNAP23O00161 211 aa14.53□□□□□ -0.08
VMP1-211ENST00000591315 UFL1O94874 794 aa14.53□□□□□ -0.08
VMP1-211ENST00000591315 CCT4P50991 539 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms