RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 BCL11AQ9H165 835 aa12.17□□□□□ -0.46
PTPN2-210ENST00000591115 CWC25Q9NXE8 425 aaPredicted RBP12.17□□□□□ -0.46
PTPN2-210ENST00000591115 STK32BQ9NY57 414 aa12.17□□□□□ -0.46
PTPN2-210ENST00000591115 TRIM28Q13263 835 aaKnown RBP12.16□□□□□ -0.46
PTPN2-210ENST00000591115 SLC15A2Q16348 729 aa12.16□□□□□ -0.46
PTPN2-210ENST00000591115 TRAPPC3LQ5T215 181 aa12.16□□□□□ -0.46
PTPN2-210ENST00000591115 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
PTPN2-210ENST00000591115 GPATCH3Q96I76 525 aa12.16□□□□□ -0.46
PTPN2-210ENST00000591115 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
PTPN2-210ENST00000591115 COPRSQ9NQ92 184 aa12.16□□□□□ -0.46
PTPN2-210ENST00000591115 LAMB2P55268 1798 aa12.16□□□□□ -0.46
PTPN2-210ENST00000591115 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
PTPN2-210ENST00000591115 RFC4P35249 363 aa12.15□□□□□ -0.46
PTPN2-210ENST00000591115 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
PTPN2-210ENST00000591115 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
PTPN2-210ENST00000591115 KIF2CQ99661 725 aa12.15□□□□□ -0.46
PTPN2-210ENST00000591115 ATP5J2-PTCD1G3V325 749 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 GPTP24298 496 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 TCIRG1Q13488 830 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.47
PTPN2-210ENST00000591115 COL23A1Q86Y22 540 aaPredicted RBP12.15□□□□□ -0.47
PTPN2-210ENST00000591115 NUTM1Q86Y26 1132 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 HSCBQ8IWL3 235 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 ISCA1Q9BUE6 129 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 PDGFDQ9GZP0 370 aaPredicted RBP12.15□□□□□ -0.47
PTPN2-210ENST00000591115 BCL2L12Q9HB09 334 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 NARFQ9UHQ1 456 aa12.15□□□□□ -0.47
PTPN2-210ENST00000591115 PA2G4Q9UQ80 394 aaKnown RBP12.15□□□□□ -0.47
PTPN2-210ENST00000591115 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 ERVV-1B6SEH8 477 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 ZPR1O75312 459 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
PTPN2-210ENST00000591115 CHMLP26374 656 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
PTPN2-210ENST00000591115 EPHA10Q5JZY3 1008 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
PTPN2-210ENST00000591115 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
PTPN2-210ENST00000591115 MYH3P11055 1940 aa12.13□□□□□ -0.47
PTPN2-210ENST00000591115 SASH1O94885 1247 aa12.13□□□□□ -0.47
PTPN2-210ENST00000591115 HMGB2P26583 209 aaKnown RBP12.13□□□□□ -0.47
PTPN2-210ENST00000591115 RABEP1Q15276 862 aa12.13□□□□□ -0.47
PTPN2-210ENST00000591115 HSP90AB3PQ58FF7 597 aa12.13□□□□□ -0.47
PTPN2-210ENST00000591115 TSHZ3Q63HK5 1081 aa12.13□□□□□ -0.47
PTPN2-210ENST00000591115 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
PTPN2-210ENST00000591115 GYS1P13807 737 aa12.12□□□□□ -0.47
PTPN2-210ENST00000591115 FOXO4P98177 505 aa12.12□□□□□ -0.47
PTPN2-210ENST00000591115 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
PTPN2-210ENST00000591115 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
PTPN2-210ENST00000591115 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
PTPN2-210ENST00000591115 ZNF652Q9Y2D9 606 aa12.12□□□□□ -0.47
PTPN2-210ENST00000591115 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
PTPN2-210ENST00000591115 TBC1D9BQ66K14 1250 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 AACSQ86V21 672 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 ANTXR1Q9H6X2 564 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 LMBR1LQ6UX01 489 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 ZNF34Q8IZ26 560 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 FLAD1Q8NFF5 587 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 IL17RAQ96F46 866 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 PLA2G12BQ9BX93 195 aa12.11□□□□□ -0.47
PTPN2-210ENST00000591115 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPN2-210ENST00000591115 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
PTPN2-210ENST00000591115 PCCAP05165 728 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-210ENST00000591115 MCCP23508 829 aa12.1□□□□□ -0.47
PTPN2-210ENST00000591115 ANAPC15P60006 121 aa12.1□□□□□ -0.47
PTPN2-210ENST00000591115 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
PTPN2-210ENST00000591115 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-210ENST00000591115 NLRP10Q86W26 655 aa12.1□□□□□ -0.47
PTPN2-210ENST00000591115 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-210ENST00000591115 EAF2Q96CJ1 260 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-210ENST00000591115 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
PTPN2-210ENST00000591115 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
PTPN2-210ENST00000591115 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
PTPN2-210ENST00000591115 CARMIL3Q8ND23 1372 aa12.09□□□□□ -0.47
PTPN2-210ENST00000591115 PSDA5PKW4 1024 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-210ENST00000591115 NFIXQ14938 502 aa12.09□□□□□ -0.47
PTPN2-210ENST00000591115 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
PTPN2-210ENST00000591115 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
PTPN2-210ENST00000591115 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
PTPN2-210ENST00000591115 HIP1O00291 1037 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 RGL2O15211 777 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 CIAO1O76071 339 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-210ENST00000591115 RUFY2Q8WXA3 655 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 SIL1Q9H173 461 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 CDHR2Q9BYE9 1310 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 SPEF2Q9C093 1822 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 K7ELQ4 463 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-210ENST00000591115 SGSM2O43147 1006 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 IL15P40933 162 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-210ENST00000591115 DDR1Q08345 913 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 NBR1Q14596 966 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 SUSD4Q5VX71 490 aa12.08□□□□□ -0.48
PTPN2-210ENST00000591115 SYNE4Q8N205 404 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms